cluster # 12707

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Oryza sativa
cluster # 12707 cluster # 12707 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12707#0 length = 1930 sequences # 10

consensus_12707#1 length = 575 sequences # 1

consensusID : consensus_12707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1930
fasta sequence

                              [TTTTTTTTTTGAAAGAAAAATATTGATAAATGCATACGCAGTCCCTATATGGCTATATATATGGTGGTAAACTGGCATGTACACATGCTGTTGTGAGTAGTGATTAGCTAGGCGGCTATTAGCAGCAGCAACCAGTTCTTTTTGCGTTCGGGAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAA-CGATCTCCCCAGCAAC-GACTTCAACAGCGTGTTCCGGCAGAAGC-AGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGGACTACGTGGTGTCGTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAGATGCGGCGCCCAACGAGGGGAGGATGTACGTGTCGGCGTCGTCGAGCTCGAGCTCCAGCTCCAGGGTGCTGCACGCCTACAGGGCTCAGTTCCAGGCCGACTTCCGCCTCTTCCTCTCCTGCCGCGCCGAGGAGGTCCGCCGCGGAGGCGTCCTCCTCCTCACCTTCGTGGCCAGGCGGGAGGCGGTGCCCTCGCCGCACGACTGCCACCTCTGGGACCTGCTCGCCGAGGCCGCCGCCGACGACAGGAGGCTCGTCGACTCCTTCGACGCGCCCTTCTATGGGCCCTGCCCGGAGGAGCTGAGGGAGGCCATCCGCGAGGAGGGGTCCTTCCAGGTGACGAGGATGGAGCTCTTCGAGGTGAGCCGCTCCCGCTCATGCCAATCCCAAGCAGATCTAGATCAGCTGGCGGCTCAGACAAGCAGCACCATCAGGGCGGTGGTTGAGCCTATGCTTGGACCACACTTCGGGTGGGACGCCATGGACGCCCTCTTCCGGAGGTACACCCACCTGCTCCACAATTACTACCGCCACAACAACGACCAGCTCACCAACGTCTTCCTCGCCTTGCACAAGATTTGACTTCATTCATCCCATCCTTCCTTCCTTCAACCATATATATATACCACATTCCCTACAGTATCAGTATGTATTACTGTATTTCCAAAACGTACCTACAATATATACCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTAAAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTAAGTGTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAACTAGTGAGTGGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATATATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATCCCGATACTACGATGCGATTAAACAATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAGTACAACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTCAAAGTGTATAGTACAACTTCTCTTCTAGATGTGATCCTCCTATCTTATTATAAATATGTTTTTATTGTGTTTGTGTTGTAATTAACATATATAAATCTGTTGTGACTGGAATGGATTTTAAACCTCTTGAGGGATCAAAAAAGGG]

[-] EMBL BM418786             [TTTTTTTTTTGAAAGAAAAATATTGATAAATGCATACGCAGTCCCTATATGGCTATATATATGGTGGTAAACTGGCATGTACACATGCTGTTGTGAGTAGTGATTAGCTAGGCGGCTATTAGCAGCAGCAACCAGTTC TTTTGCGTATGATAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCAGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAAGCGATCTCCCCAGCAACAGACTTCAACAGCGTGTTCCGG AGAAGCAAGAAGCTGGTGGT  CGAGCAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK064690             [                                                                                             TGAGTAGTGATTAGCTAGGCGGCTATTAGCAGCAGCAACCAGTTCTTTTTGCGTATGATAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCAGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAA CGATCTCCCCAGCAAC GACTTCAACAGCGTGTTCCGGCAGAAGC AGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGGACTACGTGGTGTCGTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAGATGCGGCGCCCAACGAGGGGAGGATGTACGTGTCGGCGTCGTCGAGCTCGAGCTCCAGCTCCAGGGTGCTGCACGCCTACAGGGCTCAGTTCCAGGCCGACTTCCGCCTCTTCCTCTCCTGCCGCGCCGAGGAGGTCCGCCGCGGAGGCGTCCTCCTCCTCACCTTCGTGGCCAGGCGGGAGGCGGTGCCCTCGCCGCACGACTGCCACCTCTGGGACCTGCTCGCCGAGGCCGCCGCCGACGACAGGAGGCTCGTCGACTCCTTCGACGCGCCCTTCTATGGGCCCTGCCCGGAGGAGCTGAGGGAGGCCATCCGCGAGGAGGGGTCCTTCCAGGTGACGAGGATGGAGCTCTTCGAGGTGAGCCGCTCCCGCTCATGCCAATCCCAAGCAGATCTAGATCAGCTGGCGGCTCAGACAAGCAGCACCATCAGGGCGGTGGTTGAGCCTATGCTTGGACCACACTTCGGGTGGGACGCCATGGACGCCCTCTTCCGGAGGTACACCCACCTGCTCCACAATTACTACCGCCACAACAACGACCAGCTCACCAACGTCTTCCTCGCCTTGCACAAGATTTGACTTCATTCATCCCATCCTTCCTTCCTTCAACCATATATATATACCACATTCCCTACAGTATCAGTATGTATTACTGTATTTCCAAAACGTACCTACAATATATACCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTAAAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTAAGTGTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAACTAGTGAGTGGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATATATATTTAATATAAATATTAAATTAAACTTAGAAAAATAAAATATTATATATCCCGATACTACGATGCGATTAAACAATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAGTACAACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTCAAAGTGTATAGTACAACTTCTCTTCTAGATGTGATCCTCCTATCTTATTATAAATATGTTTTTATTGTGTTTGTGTTGTAATTAACATATATAAATCTGTTGTGACTGGAATGGATTTTAAACCT                    ]
[+] EMBL CB648602             [                                                                                                               GCGGCTCTTAGCAGCAGCAACCAGTTCTTTTTGCGTATGATAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCAGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAA CGATCTCCCCAGCAAC GACTTCAACAGCGTGTTCCGGCAGAAGC AGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGGACTACGTGGTGTCGTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAGATGCGGCGCCCAACGAGGGGAGGATGTACGTGTCGGCGTCGTCGAGCTCGAGCTCCAGCTCCAGGGTGCTGCACGCCTACAGGGCTCAGTTCCAGGCCGACTTCCGCCTCTTCCTCTCCTGCCGCGCCGAGGAGGTCCGCCGCGGAGGCGTCCTCCTCCTCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF291691             [                                                                                                                                                  cTCGGGAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF291690             [                                                                                                                                                   TCGGGAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF334458             [                                                                                                                                                   TCGGGAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF334459             [                                                                                                                                                  cTCGGGAGATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB648603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCACCATCAGGGCGGTGGTTGAGCCTATGCTTGGACCACACTTCGGGTGGGACGCCATGGACGCCCTCTTCCGGAGGTACACCCACCTGCTCCACAATTACTACCGCCACAACAACGACCAGCTCACCAACGTCTTCCTCGCCTTGCACAAGATTTGACTTCATTCATCCCATCCTTCCTTCCTTCAACCATATATATATACCACATTCCCTACAGTATCAGTATGTATTACTGTATTTCCAAAACGTACCTACAATATATACCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTAAAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTAAGTGTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAATTAGTGAGTGGCTTTCTCTCGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATATATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATCCCGATCATATGATGCGATTAAACAATCCGATACTACTCACCTTTTACATGTTCAAAGTGTATAGTACAACTTCCATTCTAGCAGTATATTATATAGTAGTATATATCTGTTCAAAGTGTATAGTACAACTTCTCTTCTAGATGTGATCCTCCTATTTTATTATAAATATGTTTTTATTGTGTTTGTGTTGTAATTAACATATATAAATCTGTTGTGACTGGAATGGATTCTAAACCTCTTGAGGGATCAAAAAAGGG]
[+] EMBL BI808555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cATATATACCACATGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTAAAATCGGGATACC ACTGTTTCATGTACTAGAC ATATTTAAATTC AAACTATTTAAGTGTATTTGTGTTTATGTATCTTC AAATCCATCTTAAATAAAATTATTAGAACTAGTGA TGGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATATATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATCCCGATACTACGATGCGATTAAACCATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAGTACAACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTC AAGTGTATAGTAC ACTTCTCTTCTAGATGTGATCCTCCTATCTTATTATAAATATGTTTTTATTGTGTTTGTGTTGTAAaaaa                                                            ]
[+] EMBL AU057855             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTAAAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTAAGTGTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAACTAGTGAGTGGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATATATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATNCCGATACTACGATGCGATTAAACAATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAGTACAACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTCAAAGTGTATAGTACAACTTCTCTTCTAGATGTGATCCTCCTAT                                                                                                      ]




>consensus_12707#0
TTTTTTTTTTGAAAGAAAAATATTGATAAATGCATACGCAGTCCCTATATGGCTATATAT
ATGGTGGTAAACTGGCATGTACACATGCTGTTGTGAGTAGTGATTAGCTAGGCGGCTATT
AGCAGCAGCAACCAGTTCTTTTTGCGTTCGGGAGATGATGCAGAGTGCAGCTGGAGCAAT
GGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGG
CGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGC
GACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAG
AGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGG
CGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGA
GTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAGAA
GCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTG
GCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGGACTACGTGGTGTCGTC
GTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAGATGCGGCGCCCAACGAGGGGAGGAT
GTACGTGTCGGCGTCGTCGAGCTCGAGCTCCAGCTCCAGGGTGCTGCACGCCTACAGGGC
TCAGTTCCAGGCCGACTTCCGCCTCTTCCTCTCCTGCCGCGCCGAGGAGGTCCGCCGCGG
AGGCGTCCTCCTCCTCACCTTCGTGGCCAGGCGGGAGGCGGTGCCCTCGCCGCACGACTG
CCACCTCTGGGACCTGCTCGCCGAGGCCGCCGCCGACGACAGGAGGCTCGTCGACTCCTT
CGACGCGCCCTTCTATGGGCCCTGCCCGGAGGAGCTGAGGGAGGCCATCCGCGAGGAGGG
GTCCTTCCAGGTGACGAGGATGGAGCTCTTCGAGGTGAGCCGCTCCCGCTCATGCCAATC
CCAAGCAGATCTAGATCAGCTGGCGGCTCAGACAAGCAGCACCATCAGGGCGGTGGTTGA
GCCTATGCTTGGACCACACTTCGGGTGGGACGCCATGGACGCCCTCTTCCGGAGGTACAC
CCACCTGCTCCACAATTACTACCGCCACAACAACGACCAGCTCACCAACGTCTTCCTCGC
CTTGCACAAGATTTGACTTCATTCATCCCATCCTTCCTTCCTTCAACCATATATATATAC
CACATTCCCTACAGTATCAGTATGTATTACTGTATTTCCAAAACGTACCTACAATATATA
CCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTTCTA
AAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTAAGT
GTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAACTAGTGAGT
GGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCTATA
TATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATCCCGATAC
TACGATGCGATTAAACAATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAGTAC
AACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTCAAAGTGTATAGTACA
ACTTCTCTTCTAGATGTGATCCTCCTATCTTATTATAAATATGTTTTTATTGTGTTTGTG
TTGTAATTAACATATATAAATCTGTTGTGACTGGAATGGATTTTAAACCTCTTGAGGGAT
CAAAAAAGGG

consensusID : consensus_12707#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [GCGGGAATTCGATTATGGATTTTCATCCTCGGGAATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAGAAGCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGACTACGTGGGTGTCGTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAG]

[+] EMBL CF335383             [GCGGGAATTCGATTATGGATTTTCATCCTCGGGAATGATGCAGAGTGCAGCTGGAGCAATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGAGTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAGAAGCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGACTACGTGGGTGTCGTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAG]




>consensus_12707#1
GCGGGAATTCGATTATGGATTTTCATCCTCGGGAATGATGCAGAGTGCAGCTGGAGCAAT
GGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGTGG
CGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCGGC
GACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCGAG
AGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCCGG
CGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCAGA
GTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAGAA
GCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCGTG
GCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGACTACGTGGGTGTCGTC
GTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12707#0      TTTTTTTTTTGAAAGAAAAATATTGATAAATGCATACGCAGTCCCTATATGGCTATATAT 60
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      ATGGTGGTAAACTGGCATGTACACATGCTGTTGTGAGTAGTGATTAGCTAGGCGGCTATT 120
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      AGCAGCAG--CAACCAGTTCTTTTTGCGTTCGGGAGATGATGCAGAGTGCAGCTGGAGCA 178
consensus_12707#1      -GCGGGAATTCGATTATGGATTTTCATCCTCGGGA-ATGATGCAGAGTGCAGCTGGAGCA 58
                        ** * *   * *  *    ****     ****** ************************

consensus_12707#0      ATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGT 238
consensus_12707#1      ATGGAGCTGCTGGTGGCGTCGCAAGAAGCTGGCGGCGTTGTGGTGGTGGGCATGAACAGT 118
                       ************************************************************

consensus_12707#0      GGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCG 298
consensus_12707#1      GGCGACGCCGGAGAGCTGAGCTACGCCAACAACTCGGACATGCAGCGGACGATCGCTGCG 178
                       ************************************************************

consensus_12707#0      GCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCG 358
consensus_12707#1      GCGACGAGGAAGGAGCGGCAGGAGATGGCGGCGGCCGTTCGGCGCGGTCGGCGGCAGGCG 238
                       ************************************************************

consensus_12707#0      AGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCC 418
consensus_12707#1      AGAGCCATAGCCATCGCCGACCTCGGGTGCGCCACAGGGCCGAACGCGCTGCTGATGGCC 298
                       ************************************************************

consensus_12707#0      GGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCA 478
consensus_12707#1      GGCGACGCCGTTGAGGCCATGCTGGGCGACGCGGAGCGGCAGCAGGAGGCGGCGCCTGCA 358
                       ************************************************************

consensus_12707#0      GAGTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAG 538
consensus_12707#1      GAGTTCCACGTCTTCCTCAACGATCTCCCCAGCAACGACTTCAACAGCGTGTTCCGGCAG 418
                       ************************************************************

consensus_12707#0      AAGCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCG 598
consensus_12707#1      AAGCAGAAGCTGGTGGTGCCGAGCAATAATGCCAATAGCAGCCGGTGCCTGGTGTCGGCG 478
                       ************************************************************

consensus_12707#0      TGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTGGACTACGTGG-TGTC 657
consensus_12707#1      TGGCCGGGGTCCTTCTACGGGCGCGTGTTCCCGGCGGATAGCCTG-ACTACGTGGGTGTC 537
                       ********************************************* ********* ****

consensus_12707#0      GTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAGATGCGGCGCCCAACGAGGGGAG 717
consensus_12707#1      GTCGTCGAGCCTCCACTTCCTGTCTAGGGCACCCGCAG---------------------- 575
                       **************************************                      

consensus_12707#0      GATGTACGTGTCGGCGTCGTCGAGCTCGAGCTCCAGCTCCAGGGTGCTGCACGCCTACAG 777
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      GGCTCAGTTCCAGGCCGACTTCCGCCTCTTCCTCTCCTGCCGCGCCGAGGAGGTCCGCCG 837
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CGGAGGCGTCCTCCTCCTCACCTTCGTGGCCAGGCGGGAGGCGGTGCCCTCGCCGCACGA 897
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CTGCCACCTCTGGGACCTGCTCGCCGAGGCCGCCGCCGACGACAGGAGGCTCGTCGACTC 957
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CTTCGACGCGCCCTTCTATGGGCCCTGCCCGGAGGAGCTGAGGGAGGCCATCCGCGAGGA 1017
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      GGGGTCCTTCCAGGTGACGAGGATGGAGCTCTTCGAGGTGAGCCGCTCCCGCTCATGCCA 1077
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      ATCCCAAGCAGATCTAGATCAGCTGGCGGCTCAGACAAGCAGCACCATCAGGGCGGTGGT 1137
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      TGAGCCTATGCTTGGACCACACTTCGGGTGGGACGCCATGGACGCCCTCTTCCGGAGGTA 1197
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CACCCACCTGCTCCACAATTACTACCGCCACAACAACGACCAGCTCACCAACGTCTTCCT 1257
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CGCCTTGCACAAGATTTGACTTCATTCATCCCATCCTTCCTTCCTTCAACCATATATATA 1317
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      TACCACATTCCCTACAGTATCAGTATGTATTACTGTATTTCCAAAACGTACCTACAATAT 1377
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      ATACCACGTGTCAGTTCTACGATATATATATACTACCCGGATAAAATGATAGTATCGTTT 1437
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      CTAAAATCGGGATACCAACTGTTTCATGTACTAGACAATATTTAAATTCAAAACTATTTA 1497
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      AGTGTATTTGTGTTTATGTATCTTCAAAATCAATCTTAAATAAAATTATTAGAACTAGTG 1557
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      AGTGGCTTTCTCTTGACAAATGTCTCTTTTCATGTACTATTCTATTTATTTAGAATGGCT 1617
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      ATATATATTTAATATAAATATTAAATTAAACTTAAAAAAATAAAATATTATATATCCCGA 1677
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      TACTACGATGCGATTAAACAATCCGATACTACTCACCTTCTACATGTTCAAAGTGTATAG 1737
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      TACAACTTCCATTCTAGCAGTATATTATATACTAGTATATATCTGTTCAAAGTGTATAGT 1797
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      ACAACTTCTCTTCTAGATGTGATCCTCCTATCTTATTATAAATATGTTTTTATTGTGTTT 1857
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      GTGTTGTAATTAACATATATAAATCTGTTGTGACTGGAATGGATTTTAAACCTCTTGAGG 1917
consensus_12707#1      ------------------------------------------------------------
                                                                                   

consensus_12707#0      GATCAAAAAAGGG 1930
consensus_12707#1      -------------