cluster # 12718

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Oryza sativa
cluster # 12718 cluster # 12718 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12718#0 length = 1847 sequences # 7
consensus_12718#1 length = 671 sequences # 1

consensus_12718#2 length = 665 sequences # 2
consensus_12718#3 length = 553 sequences # 1

consensusID : consensus_12718#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1847
fasta sequence

                              [ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGTGGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATTACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAATGACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGCATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAAAATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGTATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG-TGTCCGCCGC-CGGCATCGGGGAAGAGGACA-GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA-GTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA-AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC--ATTTTGA-ATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAAAAA]

[+] EMBL AK103700             [ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGTGGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATTACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAATGACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGCATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAAAATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGTATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCCGAAGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACCGGATTTTGA ATCACTTTCTAAAAAAGAATAAAAGAGATGTGTGAA                  ]
[+] EMBL CA755438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCTCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB620916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCTGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCTGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTAGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACACCGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTCGTTAATAATGTAATTATTTTTTACCTCTGTTTACGAGTTTACTAGTACC  ATTTAGAGATCc                                                  ]
[-] EMBL CB620949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCTGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACACCGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGGGGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGACTTTACTAGTACC  TTTTaa                                                        ]
[-] EMBL CB678030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCCGAAGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACAT                                                                                                                                                   ]
[+] EMBL BI811683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTGC TCGTTGTCCCCTGCACGGCATCGGGGAAGAGGACACGGGCGAAGGCGGAGATGATGTGCAA GTGGCCCTGTGGTGCGTGCACGTTCCAGCCGTCGGCGC GCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCACAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACCAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGC ATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC   TTTTGA ATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAA   ]
[+] EMBL BI811875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGT CGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCCAAAAGTCC CGGACGTCATGGTTGAATAGTCTAAGTCCC AGTGAAAATGTTGACCCTTCTCCCTTTGTACCACGGTACCAGCGAGACCAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC  CTTTTGA ATCCCTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAAAAA]




>consensus_12718#0
ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGT
GGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATT
ACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAAT
GACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGC
ATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAA
AATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGT
ATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCG
CCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGA
ACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCC
CGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCA
GCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGT
CTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCAT
GAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCA
CGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTA
CGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAG
GGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGAT
CAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAA
TATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGG
CGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGC
GCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGAT
GGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAG
CCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGT
CGTGTCCGCCGCCGGCATCGGGGAAGAGGACAGGGCGAAGGCGGAGATGATGTGCAAGGT
GGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTGGTGCG
GATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAG
CGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCAC
CACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCAT
GGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACC
AGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTT
AATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACCATTTTGAATCACTT
TCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAAAAA

consensusID : consensus_12718#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAATATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACCAGTTCTTGGAGAACGGCTCCCTGGAG]

[+] EMBL CB678029             [CCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAATATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACCAGTTCTTGGAGAACGGCTCCCTGGAG]




>consensus_12718#1
CCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCA
TGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAA
GAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAATATCGTCAGTCTCGGCAA
CCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGA
TGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGG
AAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCA
ACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCG
GGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGC
CCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGG
AGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGC
TCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACCAGTTCTTGGAGAACG
GCTCCCTGGAG

consensusID : consensus_12718#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 665
fasta sequence

                              [TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTCTGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGTGGGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTTCACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACACACACACCCAAAAAA]

[+] EMBL CF316449             [TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTCTGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGTGGGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTC                                                                                              ]
[-] EMBL CF316448             [                                                                        ATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACCCAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTATGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGT GGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTTCACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACACACACACCCAAAAAA]




>consensus_12718#2
TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTC
TTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGT
CGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGAC
AAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAG
TTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTG
TTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTT
CCGAGTCTTGTAGACACCATAAACAAACACAGTTGACATGTGTTCCTGTCATGCAGGCCA
CAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTCTGAAGTT
TATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGTGGGTGTAGTT
CCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTTCACGCCGGC
CGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACACACACACCCA
AAAAA

consensusID : consensus_12718#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 553
fasta sequence

                              [ATTGTCCTGTTCAAGGTGCTGGCGCGCCGACTACGNCCTCCCGCCAGCGGAGACCAGAGTGTTCCCCAAGTGGTGTGGGACAGGTACGACAGGGGGACATGGAGTGCTCGTGTCCGCCCCGGCATCGGGGAAGAGGACAGGGCGAAGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCCGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTCNTAATGTAATTATTTTTTAAAAAAAAAAAA]

[+] EMBL BM038202             [ATTGTCCTGTTCAAGGTGCTGGCGCGCCGACTACGNCCTCCCGCCAGCGGAGACCAGAGTGTTCCCCAAGTGGTGTGGGACAGGTACGACAGGGGGACATGGAGTGCTCGTGTCCGCCCCGGCATCGGGGAAGAGGACAGGGCGAAGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCCGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTCNTAATGTAATTATTTTTTAAAAAAAAAAAA]




>consensus_12718#3
ATTGTCCTGTTCAAGGTGCTGGCGCGCCGACTACGNCCTCCCGCCAGCGGAGACCAGAGT
GTTCCCCAAGTGGTGTGGGACAGGTACGACAGGGGGACATGGAGTGCTCGTGTCCGCCCC
GGCATCGGGGAAGAGGACAGGGCGAAGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCG
TGCAGTTCCAGCCGTCGGCCGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAG
ATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGC
TCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGC
GAGGTGGCGGTCAGCCTTCCTGCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGT
CCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAGATTTCG
TACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTCNTAATGTAATTATTTTT
TAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12718#0      ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGT 60
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      GGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATT 120
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      ACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAAT 180
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      GACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGC 240
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      ATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAA 300
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      AATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGT 360
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      ATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCG 420
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGA 480
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      ACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCC 540
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCA 600
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      GCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGT 660
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCAT 720
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      GAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCA 780
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTA 840
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAG 900
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      GGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGAT 960
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAA 1020
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      TATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGG 1080
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------------------------
consensus_12718#2      ------------------------------------------------------------
                                                                                   

consensus_12718#0      CGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGC 1140
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      ------------------------------------------CCTCTGATCCTCTCCATC 18
consensus_12718#2      ----------------------TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATC 38
                                                                                   

consensus_12718#0      GCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGAT 1200
consensus_12718#3      ----------------------------------------------------------AT 2
consensus_12718#1      CAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGAT 78
consensus_12718#2      CAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGAT 98
                                                                                 **

consensus_12718#0      GGTGCTGTTCGAGGT-----GCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCG 1255
consensus_12718#3      TGTCCTGTTCAAGGT-----GCTGGCGCGCCG-----ACTACGNCCTCC---CGCCAGCG 49
consensus_12718#1      TTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATC--AAGCTCAAG 136
consensus_12718#2      TTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATC--AAGCTCAAG 156
                           ***    *        *  *    *  *     *  * *  *       **    *

consensus_12718#0      GAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAG 1315
consensus_12718#3      GAGACC--AGAGTG-TTCCCCAAGTGG-TGTGGGACAGGTACGA-CAGGGGGACATGGAG 104
consensus_12718#1      GAAGTT--ATCTAGATTCTACTAGACAATATCGT-CAGTCTCGG-CAACCGCGGCTGCAG 192
consensus_12718#2      GAAGTT--ATCTAGATTCTACTAGACAA-GTAAGCCTTTTTTTTTTCTCTGTGCCCAGTT 213
                       **           * ***  * **      *    *              *         

consensus_12718#0      TGCGTCGTGTCCGCCGCCGGCATCGGGGAAGAGGACAGGGCGAAGGCGGAGATG-ATGTG 1374
consensus_12718#3      TGC-TCGTGTCCGCC-CCGGCATCGGGGAAGAGGACAGGGCGAAG-CGGAGATG-ATGTG 160
consensus_12718#1      TAG-TGATGCTCGCT-CTG--ATCAAGCGATGCCGCCGCTACAGGAGGAAGATG-AAGAA 247
consensus_12718#2      GATCTCTTCTTCATT-TGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCC 272
                           *  *   *      *   **             *              **      

consensus_12718#0      CAAGGTGGC-GCTGTGGT-GCGTGCAGTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGC 1432
consensus_12718#3      CAAGGTGGC-GCTGTGGT-GCGTGCAGTTCCAGCCGTCGGCC--GCCGACGATGAGCAGC 216
consensus_12718#1      GAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGC-GAGATGGAAGCCC 306
consensus_12718#2      TCAGCTGCAAACCAAGTT---CTAC----TGGTTGTTCTTCTCCTTTTCAGTGGAATCAG 325
                         ** **    *   * *      *            *  *            **     

consensus_12718#0      GTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTAC 1492
consensus_12718#3      GTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTAC 276
consensus_12718#1      GCGACGCGGCGGACAGCGTGAT-GATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAG 365
consensus_12718#2      ACCAAGCCTTTTAC-GTGTTCTTGAAAAACATCGTTCC-------GAGTCTTGTA--GAC 375
                            **        * *     **     ****  **        *           * 

consensus_12718#0      GTCATGAGCG-GCGGCAGCGGCAGCTCGACGCTGACGAGC-AGCAGCACGAACCTGAG-- 1548
consensus_12718#3      GTCATGAGCG-GCGGCAGCGGCAGCTCGACGCTGACGAGC-AGCAGCACGAACCTGAG-- 332
consensus_12718#1      ATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAAC 425
consensus_12718#2      ACCATAAACA-AACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGAT------ 428
                         * * * *      * *  *          * *    **  **  *  *          

consensus_12718#0      ---CAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTC--CTGCCAAA 1603
consensus_12718#3      ---CAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTC--CTGCCAAA 387
consensus_12718#1      TACTCGTCGGAGCTCGGCTCCGGCGGGTT-CGGCGTGGTCTACAGGGGGGAGCTGCCCAA 484
consensus_12718#2      ---TCTTTTGAGTTC---TGAGATGATTT------TGTTCATGCATGAAGTCCTTTCTGA 476
                                * *  *   *                **               **  *  *

consensus_12718#0      AAGTCCACGGA-CGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCC----- 1657
consensus_12718#3      A-GTCCACGGA-CGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCC----- 440
consensus_12718#1      AGGCCTGCAGGTCGCCGTGA--AGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAG 542
consensus_12718#2      AGTTTATTATGGTGAACTAAATATTTTTTCTGTA-ATCCTTAAATTTAAGCACGT----G 531
                       *            *   *       *  **          * **                

consensus_12718#0      -TTCTCCCTTTGTACAACGGTACCAGCGAGACAAAG-ATTTCGTACATATTTTATCGTCA 1715
consensus_12718#3      -TTCTCCCTTTGTACAACGGTACCAGCGAGACAA-G-ATTTCGTACATATTTTATCGTCA 497
consensus_12718#1      GCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTC 602
consensus_12718#2      GGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTT 591
                           *             ** **    *  *            *     *  *       

consensus_12718#0      TAATGTTGTTGCAATTATATTTGT--TAATAATGTAATTATTTTTTACCTCTGTTTATGA 1773
consensus_12718#3      TAATGTTGTTGCAATTATATTTGT--TCNTAATGTAATTATTTTTTAAAAAAAAAAAA-- 553
consensus_12718#1      TACGGCTTCTGCTTCGACGCC-GA--CACCAAGGCGCTGGTCTACCAGTTCTTGGAGAAC 659
consensus_12718#2      CACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACAC 651
                        *        **                   *     *  *     *             

consensus_12718#0      GTTTACTAGTACCATTTTGAATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTT 1833
consensus_12718#3      ------------------------------------------------------------
consensus_12718#1      GGCTCCCTGGAG------------------------------------------------ 671
consensus_12718#2      ACACACCCAAAAAA---------------------------------------------- 665
                                                                                   

consensus_12718#0      CGTAGGAAAAAAAA 1847
consensus_12718#3      --------------
consensus_12718#1      --------------
consensus_12718#2      --------------