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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1649 fasta sequence
[TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCATATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTGTCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAGAGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTTGTGGTAAAAGATGTATCAGTTCAGTTAAAAAAAAAA]
[+] EMBL CF307346 [TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCATATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTGTCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAGAGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTNTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGA ]
[+] EMBL AK063300 [ GTGGCCAGTAATAACCAATTTGAGGAATCTTTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGATGATGAAGCATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGGCAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTAAGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGTAATTTGTAACAGCTCAGTTACTTGTG ]
[+] EMBL CB679812 [ aaactttATGTATACTTTGCAAAGACAATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGATTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGTTTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAGGTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTCTATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAAGTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCACTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTT ]
[-] EMBL CB679813 [ AGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGCAAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTTTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCCCCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTTGACGCCGTGCTGTGCCTCATTTTTTTTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATGAAGGTGTAACATCTCGATTACTTGTGAAAaaa ]
[+] EMBL BM421281 [ TGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTTGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTTGCTGTAAAAGATGTATCAGTTCAGTTAAAAAAAAAA]
consensusID : consensus_12722#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1518 fasta sequence
[CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGATATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATTTACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAATTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCTGACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAGCAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTGAGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGCCTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAAGTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGCAAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTGGATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATGGGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAGGCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGGTCATCTTGATGTCTCGATGCCATTGATGATATCCAAGCATCAGACGCATCCAGACGGTTCAAGTGCAAAATGGAATGATGGGAGAAGAACATGCCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTTTTTTTTGTTAGAATAGTCGATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTGGAGAGGGCTGACGCCGATCAATCCAGGCAGCCTAGAGATCAATACGTGTAAATTTTTTACCACACTATAACAGGAATTGTATAAAGAATGGGAAATACGCGAGTTGT]
[+] EMBL CB667252 [CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGATATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATTTACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAATTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCTGACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAGCAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTGAGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGCCTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCC ]
[+] EMBL CB663507 [ ATCATAAATTCTTGTTGCGGTTGCTGGACCAACAAAATGACTTGGGCAGATTTGATGTTGGAAATTCTTTGGATCAGGATTCCTCTTCTAGGAGTTCGTTAGATGTGTCCACGTGGAGCTATGGTTCTGACCGACCTCGAACTGGAAATAATGACTCCAAGGATATTCTTTTGACAGTTTCTTTTGAGGATGACGATTCAATTTCTGGGGATAAAGCTAAATTTTCTGTAACATGTTGTTTTGCAAAGCAATTTGATGCAATCGGAAGAGAGTGCTGTCGAGACGAGCTTTACTACATTCGTTCTTTGAGTCCATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACACTACATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGACTATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCACGAAGCCCCACGTGCCTTGCTAAAGTTCTTGGTCTTTAC ]
[-] EMBL CB663508 [ CAGGAACTTGAGAGATGCAAAGGAACTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATCAAGAATATATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAAGTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGCAAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTGGATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATGGGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAGGCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGGTCATCTTGATGTCTCGATGCCATTGATGATATCCAAGCATCAGACGCATCCAGACGGTTCAAGTGCAAAATGGAATGATGGGAGAAGAACATGCCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTTTTTTTTGTTAGAATAGTCGATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTGGAGAGGGCTGACGCCGATCAATCCAGGCAGCCTAGAGATCAATACGTGTAAATTTTTTACCACACTATAACAGGAATTGTATAAAGAATGGGAAATACGCGAGTTGT]
consensusID : consensus_12722#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 829 fasta sequence
[TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA-TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTAGTGTTAAAGATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA]
[+] EMBL CB681445 [TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAAT ]
[-] EMBL CB681446 [ TATAACACGAATACACGATTCATTCCTGCAGTCATTGGACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATCGGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAGGCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAA TTTTTTTTTGAGCAAAATGGGGGTGAAACGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTCGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACAAGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGCTCAGTTACTAGTGTTAAAGATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA]
[-] EMBL CA305677 [ CCGTCCCCGACGACTGGTCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAGAATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTTGAGCAAAATGGGGGTGAAATGAGACAGGTAGCCATTTAGCCAACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTGTAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCCACCTTGTTGTGTGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGGAAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACGCCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12722#0 ------------------------------------------------------------
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 CTTGAGAGAACAGGCAGGGGTTTGTCCCCGACATTCAAAACTGAGCTATCAGTTCCTGAT 60
consensus_12722#0 ------------TCTGCTGCTCATATGGTGAGCGATGGGGCACGACTATTACTGCCTCAT 48
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 ATAATGCATGGTGAAGGTCGTTTGCTTCTTCAAAATGCTGGAGATGTTGTTGTTCCAATT 120
consensus_12722#0 ATTGACTTTGAAGGTGGCGTTGTTGTTGCTGTCTATGATGATGAGCCAACCAGTATTGTG 108
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 TACGATGATGAGCCATCCAGCATGATAGCCCATGCCATGACTGTTCCTGATTATCATAAA 180
consensus_12722#0 TCGTATGTCATGACATCACAAGAATACATTGAACACATCACACATAAAATGGATACGAAG 168
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 TTCATGTTGCCGTTGCTGGACCAGCAAAATGACTTGGGCAGATTTAGTGTTGGAAATTCT 240
consensus_12722#0 AGCAGCTTTCATCATCCAGTAAATTGTGCTGTGGCCAGTAATAACCAATTTGAGGAATCT 228
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 TTGGATCAGGATTCCTCTTCTAGGAGTTCATTAGATGTATCCACGTGGAGCTATGGTTCT 300
consensus_12722#0 TTTCTCCCACAAGAAGGCCATTCAGAATTTAAAGGAACCCACTTCAGTTTTTCTTTTGAT 288
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 GACCAACCTCGAACTGGAAATAATGACTCCAAGGATATTCATTTGACAGTTTCTTTTGAG 360
consensus_12722#0 GATGAAG---CATTTTCTGCTGATAATACAAAGTTTTCTGTGACATGTTATTTTGCAAGG 345
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 GATGACGATTCAATTTCTGTGGATAAAGCTAAATTTTCTGTAACATGTTATTTTGCAAAG 420
consensus_12722#0 CAGTTTGCTGCTCTTAGAAAGAAATGCTGCCCAGGTGATATTGATTACATACGCTCACTA 405
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 CAATTTGATGCAATCAGAAGAAAGTGCTGTCCAGACGAGCTTTACTACATTCGTTCTTTG 480
consensus_12722#0 AGTCGTTGTAAGAGATGGAGTGCACAAGGTGGAAAAAGCAATGTATACTTTGCAAAGACA 465
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 AGTCGATGCAAGAGATGGAGTGCTCAAGGTGGCAAGAGTAATGTATACTTCGCCAAAACA 540
consensus_12722#0 ATGGATGAGAGATTCATAATTAAACAGGTCACCAAGACAGAGCTGGACTCTTTTATAGGA 525
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 CTAGATGACAGATTTGTCATAAAGCAAGTGACCCGAACGGAACTAGATTCATTTGAGGAC 600
consensus_12722#0 TTTGCTCCTCACTATTTCAGGCACTTGGCAGAATCACTAACTTCTAGGAGCCCGACTTGT 585
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 TATGCAGCTGAGTACTTCAAATATTTAACAGAATCTGTATCTTCAGGAAGCCCCACGTGC 660
consensus_12722#0 TTGGCTAAAATAATGGGACTTTATCAGGTTAATATTAAGGGCTTGAAAGGAGGGCGTGAG 645
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 CTTGCTANAGTTCTTGGTCTTTACCAGGTTGCTGCCAGGAACTTGAGAGATGGCAAGGAA 720
consensus_12722#0 GTAAAGATGGATCTTATGGTGATGGAGAACATTTTCTTCCAACGAACAATATCTAGGGTC 705
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 CTAAAGTTGGATGTAATGGTCATGGAAAATCTTTTTTACAAGAAGAAGATATNCAGAATA 780
consensus_12722#0 TATGACCTAAAGGGTTCCGTGCGGTCACGCTATAATTCTGATACATCCGGCCACAATAAA 765
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 TATGACCTGAAAGGCTCTTTGCGTTCCCGTTACAATCCTGATACATCAGGAAACAACAAA 840
consensus_12722#0 GTACTTTTAGATTCTAATCTCATAGAGGCACAGCATACAAATCCTATATTTTTGGGGAGC 825
consensus_12722#2 ------------------------------------------------------------
consensus_12722#1 GTTCTCTTAGATCTGAATCTATTAGAGACACTTCATACAAAGCCCATTTTTCTCGGAAGC 900
consensus_12722#0 AAGGCAAAACAAAGAATGGAAAGAGCTGTCTGGAACGATACATCATTCCTTGCGTCATTG 885
consensus_12722#2 --TTGTTCGCGAGAAACAGTCAGTATAACACGAATACACGATTCATTCCTGCAGTCATTG 58
consensus_12722#1 AAAGCAAAACGAAGGTTGGAGCGAGCTGTCTGGAATGATACTTCTTTTCTGGCGTCGGTG 960
* * * * * * * ** ** ** *** **
consensus_12722#0 GACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATC 945
consensus_12722#2 GACGTCATGGACTACTCGCTTCTGGTCGGCGTAGACGAGAGGAAGAACGAGCTCGTGATC 118
consensus_12722#1 GATGTGATGGATTACTCACTATTAGTTGGCATTGATGAAGAAAGCAAAGAGCTTGTGATG 1020
** ** ***** ***** ** * ** *** * ** ** * ** ***** *****
consensus_12722#0 GGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAG 1005
consensus_12722#2 GGCATCATCGACTTCCTCCGGCAGTACACCTGGGACAAGCAGCTGGAGACGTGGGTGAAG 178
consensus_12722#1 GGAATCATCGACTACCTTCGTCAGTACACCTGGGACAAGCAGCTGGAGACCTGGGTGAAG 1080
** ********** *** ** ***************************** *********
consensus_12722#0 GCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAG 1065
consensus_12722#2 GCCTCCGGCATCCTGGGCGGCTCCAAGAACGAGGCCCCCACCGTCATATCGCCGGTCCAG 238
consensus_12722#1 GCGTCAGGGTTCCTGGGTGGCTCCAGAGACGTGCTCCCAACTATCATTTCCCCAGACCAG 1140
** ** ** ******* ******* *** * *** ** **** ** ** * ****
consensus_12722#0 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGG 1125
consensus_12722#2 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCCGTCCCCGACGACTGG 298
consensus_12722#1 TACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTGACTGTCCCTGACCAATGG 1200
***************************************** * ***** *** * ***
consensus_12722#0 TCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAG 1185
consensus_12722#2 TCCTCATCATAACAGGGCTTTTCCTGCCTCCCTCTTCCACCCTACCCTACGTTGAAGCAG 358
consensus_12722#1 TCATCTTGATG-------TCTCGATGCCA------TTGATGATATCCAAGCATCAGACGC 1247
** ** * ** * * **** * * ** ** * * * *
consensus_12722#0 AATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAG 1245
consensus_12722#2 AATCGTCACCGTTTCATCCCCGCTGTAATTTTTTTTTGAGCAAAATGGGGGTGAAACGAG 418
consensus_12722#1 ATCCA--GACGGTTCA-----AGTGCAAAAT-------GGAATGATGGGAGAAGAACATG 1293
* * ** **** ** ** * * * ***** * *** *
consensus_12722#0 ACAGGTAGCCATTTAGCCA-ACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTG 1304
consensus_12722#2 ACAGGTAGCCATTTAGCCA-ACCATTCTTTAATTGGTTCGGTCACTTACTAACATTGTTG 477
consensus_12722#1 CCGTTCGTTTTTTTTTTCTTAACTTTCTTTTTTCGTTTT--TTTTTTGTTAGAATAGTCG 1351
* *** * * * ****** * * ** * ** ** ** ** *
consensus_12722#0 TAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCC-ACCTTGTCGTG 1363
consensus_12722#2 TAGCCTTAGAATGATAGAAATCATAGAATAGAAACAGAGGATCAGGCC-ACCTTGTCGTG 536
consensus_12722#1 ATCCTATTGTGCCTTGTGTATGTTATTTTTGTCACAACGGGCAGGATCGAGAGCTCCCTG 1411
* * * * ** ** * * *** ** * * * * **
consensus_12722#0 TGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGG 1423
consensus_12722#2 TGTGGGCTGGACACCAAGCATGCCAATTGCAGTGTCTTTCTCCCCGTGATCTCAAGGCGG 596
consensus_12722#1 GAGAGGGCTGACGCCGATCAATCCAG--GCAG-----------CCTAGAGATCAATACGT 1458
** *** ** * ** *** **** ** ** **** **
consensus_12722#0 AAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACG 1483
consensus_12722#2 AAAAAGGCTTGGTCCCTGTAGAATGTGCATTTGCTGCTAGCGAAGGCGGATTATTCGACG 656
consensus_12722#1 GTAAATTTTTTACCACACTATAACAGGAATTGTAT---AAAGAATGGGAAATACGCGA-G 1514
*** ** * * ** ** * *** * * *** * * * ** *** *
consensus_12722#0 CCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACA 1543
consensus_12722#2 CCGTGCTGTGCCTCATTTCTTCTGATTTGATTACCTCTGGTATCCATATAGAATTGTACA 716
consensus_12722#1 TTGT-------------------------------------------------------- 1518
**
consensus_12722#0 AGATAGAGGGCAGGTCAATAAAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGC 1603
consensus_12722#2 AGATAGAGGGCAGGTCAATACAGGTGTAACATCTCGATTACTTGTGAAATTTGTAACAGC 776
consensus_12722#1 ------------------------------------------------------------
consensus_12722#0 TCAGTTACTTGTGGTAAAAGATGTATCAGTTCAGTTA------AAAAAAAAA-- 1649
consensus_12722#2 TCAGTTACTAGTGTTAAA-GATGTATCAGTTCAGTTACTTTTCAAAATAAAAGA 829
consensus_12722#1 ------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||