|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12731#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1658 fasta sequence
[CAATCCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCCTACCTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTAAAAAAAAGAAAAAAAATCTAGCTAGGCGAGCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCGCCTCCGTCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTTCCTGGTAAGGCTTTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGCGCTCGCCCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCCTCTCCACTCCGACCAGCGACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGCGTCATCCATGACCATGAGGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTCGAACAGCTTGAAGACATCCATGACAACAACTCCTCTGAACAACCTCCAGCTCCAGCTGACATGAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTCCCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCAGCCCCCTAATATACACAACACCTCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGTTAATGGCCTGAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCCTTTGATGATGGCAGCAGCAGCAATGACTTTGTGCATGCCGTTGTCAAGAAACCGCAGCTGCTGCCAAGTGATTCGAGGGGTAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGCTTTCAGTTTCAGAACGGCAATCTGCTGAGCCATCCATTTCCTCTGAACAATCATCTGCAGATGCAGTAGTAGGCGTCTAGATCCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGTGATTTATTTTGAGGAGTTGCATGGGCAGATAGACAAACAGACGGAATTCTTGATGTAACCGATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTCAAGCCAATTTATATGATAAAAAAA]
[+] EMBL CF309148 [CAATCCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCCTACCTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTAAAAAAAAGAAAAAAAATCTAGCTAGGCGAGCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCGCCTCCGTCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTTCCTGGTAAGGCTTTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGCGCTCGCCCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCCTCTCCACTCCGACCAGCGACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGC ]
[+] EMBL CF308324 [ ATCCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCCTACGTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTTTAAAAA ]
[-] EMBL CF308323 [ TCCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCCTACGTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTTTAAAAAA ]
[+] EMBL AK069257 [ CCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCCTACCTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTAAAAAAAAGAAAAAAAATCTAGCTAGGCGAGCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCGCCTCCGTCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTTCCTGGTAAGGCTTTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGCGCTCGCCCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCCTCTCCACTCCGACCAGCGACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGCGTCATCCATGACCATGAGGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTCGAACAGCTTGAAGACATCCATGACAACAACTCCTCTGAACAACCTCCAGCTCCAGCTGACATGAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTCCCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCAGCCCCCTAATATACACAACACCTCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGTTAATGGCCTGAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCCTTTGATGATGGCAGCAGCAGCAATGACTTTGTGCATGCCGTTGTCAAGAAACCGCAGCTGCTGCCAAGTGATTCGAGGGGTAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGCTTTCAGTTTCAGAACGGCAATCTGCTGAGCCATCCATTTCCTCTGAACAATCATCTGCAGATGCAGTAGTAGGCGTCTAGATCCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGTGATTTATTTTGAGGAGTTGCATGGGCAGATAGACAAACAGACGGAATTCTTGATGTAACCGATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTCAAGCC ]
[-] EMBL CF309149 [ GATGGTTACGTTAACAATTATAATGTTAATGGCCTGAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCCTTTGATGATGGCAGCAGCAGCAATGACTTTGTGCATGCCGTTGTCAAGAAACCGCAGCTGCTGCCAAGTGATTCGAGGGGTAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGCTTTCAGTTTCAGAACGGCAATCTGCTGAGCCATCCATTTCCTCTGAACAATCATCTGCAGATGCAGTAGTAGGCGTCTAGATCCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGTGATTTATTTTGAGGAGTTGCATGGGCAGATAGACAAACAGACGGAATTAATGATGTAACCGATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTCAAGCCAATTTATATGATAAAAAAA]
[-] EMBL CF310414 [ GCTTTCAGAGACTGCGACTGGCTTTCAGTTTCAGAACGGCAATCTGCTGAGCCATCCATTTCCTCTGAACAATCATCTGCAGATGCAGTAGTAGGCGTCTAGATCCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGTGATTTATTTTGAGGAGTTGCATGGGCAGATAGACAAACAGACGGAATTCTTGATGTAACCGATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTCAAGCCAATTTATATGATAAAAA ]
consensusID : consensus_12731#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1086 fasta sequence
[ACTAGTGCCAGTTTTCCTCCTACGTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTTTAAAAAAAGAAAAAAAATCTAGCTAGGCGAGCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCGCCTCCATCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTTCCTGGTAAGGCGCTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGCGCACGCCCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCTTGTCAACTCCGACGAGCGACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGCGTCATCCATGACCATGAGGCTGGACGACTGGGTGCTGTGCAGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTC---GAACAGCTTGAAGACATCCATGACAACAAC---TCCTCTGAACAACCTCCAGCTCCAGCTGACATGAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTCCCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCATCCCCCTAATATACACAACACCTCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGT]
[+] EMBL CB671182 [ACTAGTGCCAGTTTTCCTCCTACGTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACACCATCTGTTATTCTGTTTGTTTGTTTTTTTTTAAAAAAAGAAAAAAAATCTAGCTAGGCGAGCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAGGCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCGCCTCCATCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCATGGGACCTTCCTGGTAAGGCGCTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGCGCACGCCCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCTTGTCAACTCCGACGAGCGACAACATCGGCGTCAAGAAGGCCCTAGTCTTCTACAAGGGCAAGCCCCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTATCGCCTCACAGGCACATCAGCTAACAACACCACCACCACAAAGCAGCGTAGAGCATCATCCATGACCATGAGGCTGGACGACTGGGTGCTGTGCAGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGGATCAACCGTCGATGAACAGCTTGAAGACATCCATGACTACAACTCTTCCTCTCAACAACCTCCTGCTCC ]
[+] EMBL CF310413 [ CCCAACCGCGCCGCCGGCTCGGGGTACTGGAAGGCCACCGGCACCGACAAGTCCATCCTCTCCACTCCGACCAGCGACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGCGTCATCCATGACCATGAGGCTGGACGACTGGGTGCTGTGCAGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTC GAACAGCTTGAAGACATCCATGACAACAAC TCCTCTGAACAACCTCCAGCTCCAGCTGACATGAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTCCCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCATCCCCCTAATATACACAACACCTCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGT]
[+] EMBL CF310398 [ GACAACATCGGCGTCAAGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCATGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTAGAGCGTCATCCATGACCATGAGGCTGGACGACTGGGTGCTGTGCAGAATCCACAAGAAGAGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTC GAACAGCTTGAAGACATCCATGACAACAAC TCCTCTGAACAACCTCCAGCTCCAGCTGACATGAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTCCCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCAGCCCCCTAATATACACAACACCTCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTAT ]
consensusID : consensus_12731#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence
[CGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCTTCCTGCTCCTCCCAGCCCTCTAATATATCCAAACCAAACACTAAACTATAACATCAACAACAACATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGTTAATGGCCTAAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCTTTTGATGATGGCAGCAGCAGCAGCAGCAGTGACTTTTTGCATGTTGCCAAGAAACCGCTGCTGCTGCCAAGTGATTCAAGGGGCAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGTTTTCAGTTTCAGAACGGCAATATGTTGAGCCATCCATTTCCTCTGAACCAGCAGCTACTGCTGAACAATCATCTGCAGATGCAGTAGCTAGTAGGCGTCTAGATCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGGATTTATTTTGAGGAGTTGCATGACAGATAGACAAACAGACGGAATTCTTGATGTAACCCATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTC]
[-] EMBL CB671183 [CGCAGTTTCTCCTCGACGGCTCATCCGACGCCATCGCTGAGCTTCCTGCTCCTCCCAGCCCTCTAATATATCCAAACCAAACACTAAACTATAACATCAACAACAACATGCCACACGCCTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGTTAATGGCCTAAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCTTTTGATGATGGCAGCAGCAGCAGCAGCAGTGACTTTTTGCATGTTGCCAAGAAACCGCTGCTGCTGCCAAGTGATTCAAGGGGCAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGTTTTCAGTTTCAGAACGGCAATATGTTGAGCCATCCATTTCCTCTGAACCAGCAGCTACTGCTGAACAATCATCTGCAGATGCAGTAGCTAGTAGGCGTCTAGATCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAATGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGGATTTATTTTGAGGAGTTGCATGACAGATAGACAAACAGACGGAATTCTTGATGTAACCCATGCAAGGAAAGATTCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACAAGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTC]
consensusID : consensus_12731#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 84 fasta sequence
[TTTACTTTTTTTTTAATGAAAAAACATGCGTAAAGATTATCATATAAATTGGCTTGAGTACTACCTTGCACGATATTACCATTT]
[+] EMBL CF313018 [TTTACTTTTTTTTTAATGAAAAAACATGCGTAAAGATTATCATATAAATTGGCTTGAGTACTACCTTGCACGATATTACCATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12731#0 CAATCCTTCCTCTTCCTTAGCTTATTAGCTTCCTTCCTTCACTAGTGCCAGTTTTCCTCC 60
consensus_12731#1 ----------------------------------------ACTAGTGCCAGTTTTCCTCC 20
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TACCTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACAC 120
consensus_12731#1 TACGTAATCTAAGCTAGCCAGGTCGTCATCTTCTTCCTTCAGCTCACGCTGACCAAACAC 80
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 CATCTGTTATTCTGTTTGTTTGTTTTTTTA-AAAAAAAGAAAAAAAATCTAGCTAGGCGA 179
consensus_12731#1 CATCTGTTATTCTGTTTGTTTGTTTTTTTTTAAAAAAAGAAAAAAAATCTAGCTAGGCGA 140
consensus_12731#2 -----------------------------------------------------------C 1
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAG 239
consensus_12731#1 GCCGATTGAAGGAGCTGAGCATGCCGAGCAGCGGCGGCGCCATGCCTGCCCTTCCACCAG 200
consensus_12731#2 GCAGTTTCTC----CTCGACGGCTCATCCGACGCCATCGCTGAGCTTCCTGCTCCTCCCA 57
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCG 299
consensus_12731#1 GCTTCCGCTTCCACCCCACCGACGAGGAGCTCATCGTTCACTACCTCATGAACCAGGCCG 260
consensus_12731#2 GCCCTCTAATATATCCAA---ACCAAACACTAAACTATAACATCAACAACAACATGCCAC 114
consensus_12731#3 ------------------------------------TTTACTTTTTTTTTAATGAAAAAA 24
* ** **
consensus_12731#0 CCTCCGTCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCAT 359
consensus_12731#1 CCTCCATCAAGTGCCCCGTGCCAATCATCGCCGAGGTCAACATCTACAAGTGCAACCCAT 320
consensus_12731#2 ACGCCTTCGAGT--CACGCCTAGATCATCACGATGGTTA-CGTTAACAATTATAATGTTA 171
consensus_12731#3 CATGCGTAAAGATTATCATATAAATTGGCTTGAGTACTACCTTGCACGATATTACCATTT 84
* * ** * ** * * * * ** * *
consensus_12731#0 GGGACCTTCCTGGTAAGGCTTTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGG 419
consensus_12731#1 GGGACCTTCCTGGTAAGGCGCTGTTCGGCGAGAACGAATGGTACTTCTTCAGCCCGAGGG 380
consensus_12731#2 ATGGCCTAAGGAGGAAGAGAATGAT-GGCGTGT---AGTGCAACTTCTTTTGAT--GATG 225
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 ACCGCAAGTACCCCAACGGCGCTCGCCCCAACCGCGCCGCCGGCTCGGGG-TACTGGAAG 478
consensus_12731#1 ACCGCAAGTACCCCAACGGCGCACGCCCCAACCGCGCCGCCGGCTCGGGG-TACTGGAAG 439
consensus_12731#2 GCAGCAGCAGCAGCAGCAGTGACTTTTTGCATGTTGCCAAGAAACCGCTGCTGCTGCCAA 285
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GCCACCGGCACCGACAAGTCCATCCTCTCCACTCCGACCAGCGACAACATC--GGCGTCA 536
consensus_12731#1 GCCACCGGCACCGACAAGTCCATCTTGTCAACTCCGACGAGCGACAACATC--GGCGTCA 497
consensus_12731#2 GTGATTCAAGGGGCAGTGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTG 345
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 AGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCA 596
consensus_12731#1 AGAAGGCCCTCGTCTTCTACAAGGGCAAGCCTCCCAAGGGCGTCAAGACCGACTGGATCA 557
consensus_12731#2 CGACTGGTTTTCAGTTTCAGAACGGCAA--TATGTTGAGCCATCCATTTCCTCTGAACCA 403
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTA 656
consensus_12731#1 TGCACGAGTACCGTCTCACCGGCACATCAGCTAACAGCACCACCACCACAAAGCAGCGTA 617
consensus_12731#2 ---GCAGCTACTGCTGAACA-----ATCATCTGCAGATGCAGTAGCTAGTAGGCGTCTAG 455
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GAGCGTC-ATCCATGACCATGAGG-----------------------AATCCACAAGAAG 692
consensus_12731#1 GAGCGTC-ATCCATGACCATGAGGCTGGACGACTGGGTGCTGTGCAGAATCCACAAGAAG 676
consensus_12731#2 ATCCGTTTACCGATCGATCTGAAG----------------------AGAGGTGAATTAAT 493
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 AGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTCGAA 752
consensus_12731#1 AGCAACGACTTCAATTCCTCTGACCAACACGACCAAGAACCCGAGGAATCAACCGTCGAA 736
consensus_12731#2 TTCAACGAATGAAACTACA--GATTCAGA-GAGGAAGATACTGATTGTTCCATTTGGATT 550
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 CAGCTTGAAGACATCCATGACA-ACAACTCCTCTGAACAACCTCCAGCTCCAGCTGACAT 811
consensus_12731#1 CAGCTTGAAGACATCCATGACA-ACAACTCCTCTGAACAACCTCCAGCTCCAGCTGACAT 795
consensus_12731#2 TATTTTGAGGAGTTGCATGACAGATAGACAAACAGACGGAATTCTTGATGTAACCCATGC 610
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTC 871
consensus_12731#1 GAACAACCAACAGTCAGATTTCCAGCCCATGACGGCGATGAGCATGAGCAAGTCATGCTC 855
consensus_12731#2 AAGGAA---AGATTCAGATTTCTT-CCTATGGCATTAAT------TTGTGAGTTTTTTTT 660
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 CCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGG 931
consensus_12731#1 CCTCACCGATCTCCTCAACACCATCGACTGCGCCGCGCTCTCGCAGTTTCTCCTCGACGG 915
consensus_12731#2 TGTTTTCATTTTCATGTACAAGAATG--TAAATTATAAA-TGGTAATATCGTGCAAGCTA 717
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 CTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCAGCCCCCTAATATACACAACACC 991
consensus_12731#1 CTCATCCGACGCCATCGCTGAGCCTCCTGCTCCTCCCATCCCCCTAATATACACAACACC 975
consensus_12731#2 GTACTC------------------------------------------------------ 723
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGC 1051
consensus_12731#1 TCATCCAAATTACCAAACACTAAACTATAACATTAACAGCAACAGCAGCATGCCACACGC 1035
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 CTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGTTAATGGCCT 1111
consensus_12731#1 CTTCGAGTCACGCCTAGATCATCACGATGGTTACGTTAACAATTATAATGT--------- 1086
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GAGGAGGAAGAGAATGATGGCGTGTAGTGCAACTTCCTTTGATGATGGCAGCAGCAGCAA 1171
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TGACTTTGTGCATGCCGTTGTCAAGAAACCGCAGCTGCTGCCAAGTGATTCGAGGGGTAG 1231
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TGGTTTTGGAGGAGGTTACTGCAACCAGCAGCTTTCAGAGACTGCGACTGGCTTTCAGTT 1291
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TCAGAACGGCAATCTGCTGAGCCATCCATTTCCTCTGAACAATCATCTGCAGATGCAGTA 1351
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GTAGGCGTCTAGATCCCGTTTACCGATCGATCTGAAGAGAGGTGAATTAATTTCAACGAA 1411
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TGAAACTACAGATTCAGAGAGGAAGATACTGATTGTTCCATTTGTGATTTATTTTGAGGA 1471
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 GTTGCATGGGCAGATAGACAAACAGACGGAATTCTTGATGTAACCGATGCAAGGAAAGAT 1531
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 TCAGATTTCTTCCTATGGCATTAATTTGTGAGTTTTTTTTTGTTTTCATTTTCATGTACA 1591
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 AGAATGTAAATTATAAATGGTAATATCGTGCAAGCTAGTACTCAAGCCAATTTATATGAT 1651
consensus_12731#1 ------------------------------------------------------------
consensus_12731#2 ------------------------------------------------------------
consensus_12731#3 ------------------------------------------------------------
consensus_12731#0 AAAAAAA 1658
consensus_12731#1 -------
consensus_12731#2 -------
consensus_12731#3 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||