cluster # 12774

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Oryza sativa
cluster # 12774 cluster # 12774 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12774#0 length = 1319 sequences # 7
consensus_12774#1 length = 772 sequences # 1

consensus_12774#2 length = 553 sequences # 2
consensus_12774#3 length = 368 sequences # 1

consensusID : consensus_12774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1319
fasta sequence

                              [ACTTCTAGCTCCTCTTCTTCT-CCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGGCCCCGTCACCCGTCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGTCGTCGTCGGCCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCTCCGGTCGTCGTCGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGTGACGTACCCGACGCCGCCGACGACGACGCCGTGCCCGCCGCCGCCGCCGGCGACGCAGAGGTGCCCGGTGGACTCGCTGAAGATCGGGGCGTGCGTGGACCTGCTGGGGGGGCTGGTGCACGTGGGGATCGGCGACCCGGTGGTGAACAAGTGTTGCCCGCTGCTGGAGGGGCTCGTGGAGCTGGAGGCCGCCGTGTGCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCTGCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTG-TTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCCTCCTCTTCTTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAATTGTTTCCGTCAAGATCGTATCCTATCAAGAAATTAATTAATAATGCCTGCAGCCTGACTTAAGCGTGTAATCCTACATACTTCCATGTGCGGACAGTGCATGCAATCTGATGTAATAATGTGTCGGATCTAAGCATAATATGTCTG]

[+] EMBL AK103715             [ACTTCTAGCTCCTCTTCTTCT CCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGGCCCCGTCACCCGTCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGTCGTCGTCGGCCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCTCCGGTCGTCGTCGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGTGACGTACCCGACGCCGCCGACGACGACGCCGTGCCCGCCGCCGCCGCCGGCGACGCAGAGGTGCCCGGTGGACTCGCTGAAGATCGGGGCGTGCGTGGACCTGCTGGGGGGGCTGGTGCACGTGGGGATCGGCGACCCGGTGGTGAACAAGTGTTGCCCGCTGCTGGAGGGGCTCGTGGAGCTGGAGGCCGCCGTGTGCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCTGCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTG TTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCTTCCTCTTCTTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAATTGTTTCCGTCAAGATCGTATCCTATCAAGAAATTAATTAATAATGCCTGCAGCCTGACTTAAGCGTGTAATCCTACATACTTCCATGTGCGGACAGTGCATGCAATCTGATGTAATAATGTGTCGGATCTAAGCATAATATGTCTG]
[+] EMBL AU182819             [          CCTCTTCTTCTCCCCCCCCCCCCCCCCCCCTTNTAACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGNGGGCAGCACCAAGCTGNGGCCATTCCTCCTGACGCTGCTCCTCCTCCTNTCCACCACCGTGGNTTCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTNTCCCTNTCCCGGCCACCCCAAGGGCCCNAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCNACCTACCCGTNTCCGGTCACCCGCCCGCCGCCGTTCGTCGCCCCTCCNAAGGTCCCCGTNACCCACCCGCCGAAGGGCCCCGTCACCCGTCCGCCGCCGGTCACCTACCCCACACCTCCGGTNACCACCCCCCCGGTCGTNGTCGGCCCGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA999290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGGAGGCCGCCGTGTGCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCTGCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTG TTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCCTCCTCTTCTTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAATTGTTTCCGTCAAaaaaa                                                                                                                                 ]
[+] EMBL CB001041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCTGCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTT                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OS1321893            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCTGCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGNCATTCCCCTGNCTCGNCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAANTTATTGTT                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OS1321611            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAACCCTCCCCCCGGCTACACCTGCTCCATCTAGTTCAGCCGCCATTCCCCTGCCTNGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTCCGnaa                                                                                                                                                                                                                                                         ]
[+] EMBL CA998317             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCCTCGCCATGGATGGCGCCCAAGCTCAAGCTCTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTGTTTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCCTCCTCTT                                                                                                                                                                                               ]




>consensus_12774#0
ACTTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGC
AAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGAC
GCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATG
CGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCC
CAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGT
CACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGG
CCCCGTCACCCGTCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGT
CGTCGTCGGCCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCTCCGGTCGTCGT
CGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGTGACGTA
CCCGACGCCGCCGACGACGACGCCGTGCCCGCCGCCGCCGCCGGCGACGCAGAGGTGCCC
GGTGGACTCGCTGAAGATCGGGGCGTGCGTGGACCTGCTGGGGGGGCTGGTGCACGTGGG
GATCGGCGACCCGGTGGTGAACAAGTGTTGCCCGCTGCTGGAGGGGCTCGTGGAGCTGGA
GGCCGCCGTGTGCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCT
GCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTG
CTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCAAGCTCAAGCT
CTTGTTTGTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTA
TTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCT
AGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTGTT
TTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCCTCCTCTTCTTGATTGTGTG
GTGTGATCAATAAGACAGCAACTGTTCAGAAATTGTTTCCGTCAAGATCGTATCCTATCA
AGAAATTAATTAATAATGCCTGCAGCCTGACTTAAGCGTGTAATCCTACATACTTCCATG
TGCGGACAGTGCATGCAATCTGATGTAATAATGTGTCGGATCTAAGCATAATATGTCTG

consensusID : consensus_12774#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 772
fasta sequence

                              [TTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAGCCCGACCTCACCCTTGGCCTCAAGCGCCACACCGACCCCGGTACCATCACGCTCCTCCTCCAGGACCTCGTCGGCGGCCTCCAGGCCACCCGCGACGCCGGCAAGACGTGGATCACCGTCCAGCCGATCACGTTCGCGGAGATGTACCGGCGCAAGATGGCACGCGACCTCGAGCTCGCCAAGCTCAAGAAGAAGGCCAAGGAGCAGCGGCAGCTGCAGCAGGCGGCGCTGCCGCCGCCGCCGCCGACGCAGGTCGCCGCGGAGTTGGCAGCACAGAAGCCCAAGTCTCTCGACGAGATTCTTGCCTAGATCGCCATGGACGCAGCGCGATCGATGTGTGGAGTACTGTGGACTAGATATAAGTATAACTATGCTGTCTATGCATTTGCAGCACGAATGCTTGAAGACTGAAATAATGTGTATCTTCCGTCGAAAATCGAAGCAGTCGTAATACTACTAATATAGTAGTAAACGAAGTAAGGACTCTTTACATGAGACCTTCTTTACATTTTCAGAGTTGTCTTTTCTCTATATCGGCTAAGTAATAGCTAGGGACAGACCTCCCGCC]

[+] EMBL AK071218             [TTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAGCCCGACCTCACCCTTGGCCTCAAGCGCCACACCGACCCCGGTACCATCACGCTCCTCCTCCAGGACCTCGTCGGCGGCCTCCAGGCCACCCGCGACGCCGGCAAGACGTGGATCACCGTCCAGCCGATCACGTTCGCGGAGATGTACCGGCGCAAGATGGCACGCGACCTCGAGCTCGCCAAGCTCAAGAAGAAGGCCAAGGAGCAGCGGCAGCTGCAGCAGGCGGCGCTGCCGCCGCCGCCGCCGACGCAGGTCGCCGCGGAGTTGGCAGCACAGAAGCCCAAGTCTCTCGACGAGATTCTTGCCTAGATCGCCATGGACGCAGCGCGATCGATGTGTGGAGTACTGTGGACTAGATATAAGTATAACTATGCTGTCTATGCATTTGCAGCACGAATGCTTGAAGACTGAAATAATGTGTATCTTCCGTCGAAAATCGAAGCAGTCGTAATACTACTAATATAGTAGTAAACGAAGTAAGGACTCTTTACATGAGACCTTCTTTACATTTTCAGAGTTGTCTTTTCTCTATATCGGCTAAGTAATAGCTAGGGACAGACCTCCCGCC]




>consensus_12774#1
TTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGCAAG
CTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCT
GCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATGCGA
CTGCGACAAGCCCAAGCACCCCAGCCCGACCTCACCCTTGGCCTCAAGCGCCACACCGAC
CCCGGTACCATCACGCTCCTCCTCCAGGACCTCGTCGGCGGCCTCCAGGCCACCCGCGAC
GCCGGCAAGACGTGGATCACCGTCCAGCCGATCACGTTCGCGGAGATGTACCGGCGCAAG
ATGGCACGCGACCTCGAGCTCGCCAAGCTCAAGAAGAAGGCCAAGGAGCAGCGGCAGCTG
CAGCAGGCGGCGCTGCCGCCGCCGCCGCCGACGCAGGTCGCCGCGGAGTTGGCAGCACAG
AAGCCCAAGTCTCTCGACGAGATTCTTGCCTAGATCGCCATGGACGCAGCGCGATCGATG
TGTGGAGTACTGTGGACTAGATATAAGTATAACTATGCTGTCTATGCATTTGCAGCACGA
ATGCTTGAAGACTGAAATAATGTGTATCTTCCGTCGAAAATCGAAGCAGTCGTAATACTA
CTAATATAGTAGTAAACGAAGTAAGGACTCTTTACATGAGACCTTCTTTACATTTTCAGA
GTTGTCTTTTCTCTATATCGGCTAAGTAATAGCTAGGGACAGACCTCCCGCC

consensusID : consensus_12774#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 553
fasta sequence

                              [TTCTAGCTCCTCTTCTTCTCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTCCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGGCCCCGTCACCCGCCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGTCGTCGTCGGCCCGCCGGTCACGTACCCCACACCTCCGGTCACCACCCCTCCAGTCGTCGTCGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGGACGTACCCGACCCCGCCGACGACGACCCCGTG]

[+] EMBL BE040805             [TTCTAGCTCCTCTTCTTCTCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTCCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGGCCCCGTCACCCGCCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGTCGTCGTCGGCCCGCCGGTCACGTACCCCACACCTCCGGTCACCACCCCTCCAGTCGTCGTCGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGGACGTACCCGACCCCGCCGACGACGACCCCGTG]
[+] EMBL CA756727             [                                         GCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTCCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACC                                                                                                                                                                                                                                                                                    ]




>consensus_12774#2
TTCTAGCTCCTCTTCTTCTCCCCCCCTTCTCACCACAACCTGCTAGCAAGCTCAGAGCTA
GCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTC
CTCTCCACCACCGTGGCTCCCATCCTCGCGGAGTACGACCCGGAATGCGACTGCGACAAG
CCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCCCAAGGGCCCCAAG
AACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCACCCGCCCGCCG
CCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGGCCCCGTCACCCGC
CCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGTCGTCGTCGGCCCG
CCGGTCACGTACCCCACACCTCCGGTCACCACCCCTCCAGTCGTCGTCGGCCCTCCGGTC
ACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGGACGTACCCGACCCCGCCGA
CGACGACCCCGTG

consensusID : consensus_12774#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 368
fasta sequence

                              [AGTTTCAGNCCCGCCATTTCCCCTTGGCCTNCGCCCATGGGATTGGGCCGCCCCAAAGCTTCAAGCTCTTNGTTTNGTTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTGTTTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCTTCCTCTTCTTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU102024             [AGTTTCAGNCCCGCCATTTCCCCTTGGCCTNCGCCCATGGGATTGGGCCGCCCCAAAGCTTCAAGCTCTTNGTTTNGTTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGTACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGATGTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTATTGCTGTGTTTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCTTCCTCTTCTTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12774#3
AGTTTCAGNCCCGCCATTTCCCCTTGGCCTNCGCCCATGGGATTGGGCCGCCCCAAAGCT
TCAAGCTCTTNGTTTNGTTTGGCTACTCGATCTCGGCTTATTGATGTGTTAATGATGAGT
ACGAGGTGTATTAATTTATTGTTGGTTTTAATTTGTTAGTGTGTGGAAACATGAGAGGAT
GTCGTCTGCTAGCTAGCTAGAGGAACGGATCAATCTGCTAACGATAGATTGATGTTCGTA
TTGCTGTGTTTTTTTTTTAATTTGTTTCAATGTTTCAGCTTAATTGCATGCTTCCTCTTC
TTGATTGTGTGGTGTGATCAATAAGACAGCAACTGTTCAGAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12774#0      ACTTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCCCTTCTCACCACAACCTGCTAGC 60
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      AAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAAGCTGCGGCCATTCCTCCTGAC 120
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      GCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCTCGCGGAGTACGACCCGGAATG 180
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CGACTGCGACAAGCCCAAGCACCCCAAGCCCTCGCACCCTTCTCCCTCTCCCGGCCACCC 240
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CAAGGGCCCCAAGAACCCTACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGT 300
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CACCCGCCCGCCGCCGCTCGTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGCCGAAGGG 360
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CCCCGTCACCCGTCCGCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCCCCGGT 420
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CGTCGTCGGCCCGCCGGTCACCTACCCCACACCTCCGGTCACCACCCCTCCGGTCGTCGT 480
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGTGACGTA 540
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      CCCGACGCCGCCGACGACGACGCCGTGCCCGCCGCCGCCGCCGGCGACGCAGAGGTGCCC 600
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      GGTGGACTCGCTGAAGATCGGGGCGTGCGTGGACCTGCTGGGGGGGCTGGTGCACGTGGG 660
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ------------------------------------------------------------
                                                                                   

consensus_12774#0      GATCGGCGACCCGGTGGTGAACAAGTGTTGCCCGCTGCTGGAGGGGCTCGTGGAGCTGGA 720
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ----------------------------------TTCTAGCTCCTCTTCTTCTCCCCCCC 26
consensus_12774#1      ------------------------TTCTAGCTCCTCTTCTTCTCCCCCCCCCCCCCCCCC 36
                                                                                   

consensus_12774#0      GGCCGCCGTGTGCCTCTGCACCACCATCAGGCTCAAGCTCCTCAACATCAACATCTACCT 780
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      TTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAA 86
consensus_12774#1      TTCTCACCACAACCTGCTAGCAAGCTCAGAGCTAGCAGCAGCCATGGCGGGCAGCACCAA 96
                                                                                   

consensus_12774#0      GCCCCTCGCGCTCCAGCTCCTCCTCACCTGCGGCAAGAACCCTCCCCCCGGCTACACCTG 840
consensus_12774#3      -------------------------------------------------AGTTTCAGNCC 11
consensus_12774#2      GCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTCCCATCCT 146
consensus_12774#1      GCTGCGGCCATTCCTCCTGACGCTGCTCCTCCTCCTCTCCACCACCGTGGCTTCCATCCT 156
                                                                             **    

consensus_12774#0      CTCCATCTAGTTCAGCCGCCATTCCCCTGCCTCGCCATGGATGGCGCCCA---------- 890
consensus_12774#3      CGCCATTT---CCCCTTGGCCTNCGCC--CATGGGATTGGGCCGCCCCAA---------- 56
consensus_12774#2      CGCGGAGTA--CGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAA---------- 194
consensus_12774#1      CGCGGAGTA--CGACCCGGAATGCGACTGCGACAAGCCCAAGCACCCCAGCCCGACCTCA 214
                       * *    *         *   * *  *  *              * **            

consensus_12774#0      -----AGCT-CAAGCTCT---------TG--TTTG--TTGGCTACTCGATCTCGGCTT-A 930
consensus_12774#3      -----AGCTTCAAGCTCT---------TNG-TTTNGTTTGGCTACTCGATCTCGGCTT-A 100
consensus_12774#2      -----GCCCTCGCACCCT---------TCTCCCTCTCCCGGCCACCCCAAGGGCCCCA-A 239
consensus_12774#1      CCCTTGGCCTCAAGCGCCACACCGACCCCGGTACCATCACGCTCCTCCTCCAGGACCTCG 274
                              *  *   * *                       **  * *        *    

consensus_12774#0      TTGATG----------TGTTAATGATGAGTACGAGG--TGTATTAATTTATTGTTGGTT- 977
consensus_12774#3      TTGATG----------TGTTAATGATGAGTACGAGG--TGTATTAATTTATTGTTGGTT- 147
consensus_12774#2      GAACCC----------TACCCCTCGCCCCCCCAAGGGCCCCACCTACCCGTCTCCGGTCA 289
consensus_12774#1      TCGGCGGCCTCCAGGCCACCCGCGACGCCGGCAAGACGTGGATCACCGTCCAGCCGATCA 334
                                                      * **      *             * *  

consensus_12774#0      TTAATTTGTTAGTGT---GTGGAAACATGAGAGGATGTCGTCTGCTAGCTAG--CTAGAG 1032
consensus_12774#3      TTAATTTGTTAGTGT---GTGGAAACATGAGAGGATGTCGTCTGCTAGCTAG--CTAGAG 202
consensus_12774#2      CCCGCCCGCCGCCGCTC-GTCGCCCCTCCCAAGGTCCCCGTCACCCACCCGC--CGAAGG 346
consensus_12774#1      CGTTCGCGGAGATGTACCGGCGCAAGATGGCACGCGACCTCGAGCTCGCCAAGCTCAAGA 394
                              *     *    *  *         * *    *     *   *       *   

consensus_12774#0      GAACGG--ATCAATCTGCTAACGATA-GATTGATGTTCGTATTGCTGT-GTTTTTTTTT- 1087
consensus_12774#3      GAACGG--ATCAATCTGCTAACGATA-GATTGATGTTCGTATTGCTGT-GTTTTTTTTTT 258
consensus_12774#2      GCCCCGTCACCCGCCCGCCGCCGGTC-ACCTACCCCACACCTCCGGTC-ACCACCCCCCC 404
consensus_12774#1      AGAAGGCCAAGGAGCAGCGGCAGCTGCAGCAGGCGGCGCTGCCGCCGCCGCCGCCGACGC 454
                            *  *     * **    * *                                   

consensus_12774#0      AATTTGTTTCAATGTTT-CAGCTTAAT--TGCATGCCTCCTCTTCTTGATTGTGTGGT-G 1143
consensus_12774#3      AATTTGTTTCAATGTTT-CAGCTTAAT--TGCATGCTTCCTCTTCTTGATTGTGTGGT-G 314
consensus_12774#2      GGTCGTCGTCGGCCCGC-CGGTCACGTACCCCACACCTCCGGTCACCACCCCTCCAGTCG 463
consensus_12774#1      AGGTCGCCGCGGAGTTGGCAGCACAGAAGCCCAAGTCTCTCGACGAGATTCTTGCCTAGA 514
                                *        * *          **    **             *       

consensus_12774#0      TGATCAATAAGACAGCAACTGTTCAGAAATTGTTTCCGTCAAGATCGTATCCTATCAAGA 1203
consensus_12774#3      TGATCAATAAGACAGCAACTGTTCAGAAAAAA--------AAAAAAAAAAAAAAAAAAAA 366
consensus_12774#2      TCGTCGGCCCTCCGGTCACCTACCCGACGCCGCCGGTGACATACCCGACGCCGCCGGGAC 523
consensus_12774#1      TCGCCATGGACGCAGC-GCGATCGATGTGTGGAGTACTGTGGACTAGATATAAGTATAAC 573
                       *   *       * *   *                                         

consensus_12774#0      AATTAATTAATAATGCCTGCAGCCTGACTTAAGCGTGTAATCCTACATACTTCCATGTGC 1263
consensus_12774#3      AA---------------------------------------------------------- 368
consensus_12774#2      GTACCCGACCCCGCCGACGACGACCCCGTG------------------------------ 553
consensus_12774#1      TATGCTGTCTATGCATTTGCAGCACGAATGCTTGAAGACTGAAATAATGTGTATCTTCCG 633
                                                                                   

consensus_12774#0      GGACAGTGCATGCAATCTGATGTAATAATGTGTCGGATCTAAGCATAATATGTCTG---- 1319
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      TCGAAAATCGAAGCAGTCGTAATACTACTAATATAGTAGTAAACGAAGTAAGGACTCTTT 693
                                                                                   

consensus_12774#0      ------------------------------------------------------------
consensus_12774#3      ------------------------------------------------------------
consensus_12774#2      ------------------------------------------------------------
consensus_12774#1      ACATGAGACCTTCTTTACATTTTCAGAGTTGTCTTTTCTCTATATCGGCTAAGTAATAGC 753
                                                                                   

consensus_12774#0      -------------------
consensus_12774#3      -------------------
consensus_12774#2      -------------------
consensus_12774#1      TAGGGACAGACCTCCCGCC 772