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Oryza sativa
cluster # 12805 cluster # 12805       Sequences # 11       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12805#0 length = 2090 sequences # 10  
 consensus_12805#1 length = 728 sequences # 1  
consensusID : consensus_12805#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2090
fasta sequence 
                              [TCGCCGCGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCCCCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGCGATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTAAATCATG-GGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGAAATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC-GACGC-GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT-GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA-ACACAATAGAACCGTATG-CCAAAATG-AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCT-GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATCAAACCGATTCTAGAATAATTTCAAAGGGATAAATGCATTCTCAATTTTCTGTTAAGCCCTAAAG]

[+] EMBL AK120392             [TCGCCGCGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCCCCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGCGATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTAAATCATG GGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGAAATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC GACGC GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCT GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAA                                                                                                 ]
[+] EMBL CB621549             [                                                                                                                                                                                                                                                                    AGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGGGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTAAATCATG GGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGAGTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGATTTGAAAATGAAAAGGGAGAAGAAATTATTGCTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU082618             [                                                                                                                                                                                                                                                                                 CCCCGGCGACGTGCTCCCGGTCCTGCCGAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTCCTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTGCTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCTCTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACACACTTTGGAGATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB679911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCTGCTCTAGAACACACTTTGGAGATTAAATCATGAGGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGGCATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGTCCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAAGCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGAGGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATTTGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAAAGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGAAATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAATCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGCAGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB621550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAGCTTTATGGCTATCATAACATGATATTTAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC GACGC GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGAAAGGTGACCCTCAGGTTTCTGCCTGTTATGAGAGCT GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAAACTGGCTCTGATAAaaaaaaga                                                                           ]
[+] EMBL AU082617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTGATGCAAACCTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC GACGC GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCT GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAAAAaa                                                                                                                                         ]
[+] EMBL CA762558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGGTGATGGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC GACGC GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCT GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATCAAACCGATTCTAGAATAAaaaaaaaa                                      ]
[-] EMBL CB679912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTGGAATGAAGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAACTGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGTTTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGCTGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGC GACGC GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCT GACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCT GTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATCAAACCGATTCTAGAATAATTTCAAGGGGATAAATGCATTCTCAATTTTCTGTTAAGCCCTAAAG]
[+] EMBL AU096507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGACCGAGTTCACTATACGCAGACGCAGTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGAATCTAGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTACA ACACAATAGAACCGTATG CCAAAATG AATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGNGAGCT GGTCTTGAGCTCAGGCATNCAATATGAAGGACTGACCTGNCTAAGAATTTGCTCACAACACAGA                                                                                                                          ]
[+] EMBL BQ908851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGAGCTACCGGAGTACANACACNATAGAACCGTATGCCCATAATGTAATGAGAACTGCCCATCTTTACCCCCAACGTACAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGAAAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCACACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCTCGTTCTTGAGCTCAGGCATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGATATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATC AACCGATTCTAGAATAATTTCNGTGGGATAAATGCATTCTCAAaaaaaaaa            ]




>consensus_12805#0
TCGCCGCGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCC
CCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGC
GATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGT
CCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGG
CCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCC
GAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTC
CTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTG
CTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCT
GAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCT
CTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACA
CACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGG
CATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGT
CCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAA
GCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGA
GGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATT
TGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAA
AGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGA
AATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAA
TCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGC
AGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATT
TAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGAT
GGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGA
AGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAAC
TGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGT
TTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGC
TGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGCGACGC
GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGA
ATCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTA
CAACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCCCCAACGTA
CAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGA
AAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCAC
ACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCTGTTCTTGAGCTCAGGC
ATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGA
TATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATCAAACCGATTCTAGA
ATAATTTCAAAGGGATAAATGCATTCTCAATTTTCTGTTAAGCCCTAAAG

consensusID : consensus_12805#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence 
                              [CGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCCCCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGCGATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAAGCAAGTGTCGTGGCCCGTGATGAACACGCTCCACAACGCCGTCGACCTGCTGGCTTCCTTCGTCGGCGCCGTGGGCCCCGGGGCGGCCCCCTTCGACGCGGCGTGGAGCGGCGCCTTGCTTGGCCCGGACGAGGCCGTGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAACGGCGCCGTGCTCCGACTTAAGACTGGTTCAGCTAAGAGTGGACATGCATGGATCTCTATGGGTTGGCACACCATATAGGGTAACCTGGGATTACTATTTTGTGGTCGAGAACCACTTTGGAGATTAATCATGGGAGAAGAGCGGAACTGGATTGTGAACACCCGGATCTTGGTTTTCATGGCTCGGAAGTTGGACCTTTTTTTGATGAGGCTACTTGGTTCAACTGGGGGGACATTCACTGCCTTTGAAA]

[+] EMBL AW155286             [CGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCCCCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGCGATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAAGCAAGTGTCGTGGCCCGTGATGAACACGCTCCACAACGCCGTCGACCTGCTGGCTTCCTTCGTCGGCGCCGTGGGCCCCGGGGCGGCCCCCTTCGACGCGGCGTGGAGCGGCGCCTTGCTTGGCCCGGACGAGGCCGTGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAACGGCGCCGTGCTCCGACTTAAGACTGGTTCAGCTAAGAGTGGACATGCATGGATCTCTATGGGTTGGCACACCATATAGGGTAACCTGGGATTACTATTTTGTGGTCGAGAACCACTTTGGAGATTAATCATGGGAGAAGAGCGGAACTGGATTGTGAACACCCGGATCTTGGTTTTCATGGCTCGGAAGTTGGACCTTTTTTTGATGAGGCTACTTGGTTCAACTGGGGGGACATTCACTGCCTTTGAAA]




>consensus_12805#1
CGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCCCCTTTC
CCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGCGATGGC
GGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGTCCTCCT
CCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGGCCTGGG
GGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCCGAAGCA
AGTGTCGTGGCCCGTGATGAACACGCTCCACAACGCCGTCGACCTGCTGGCTTCCTTCGT
CGGCGCCGTGGGCCCCGGGGCGGCCCCCTTCGACGCGGCGTGGAGCGGCGCCTTGCTTGG
CCCGGACGAGGCCGTGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCTGAACGG
CGCCGTGCTCCGACTTAAGACTGGTTCAGCTAAGAGTGGACATGCATGGATCTCTATGGG
TTGGCACACCATATAGGGTAACCTGGGATTACTATTTTGTGGTCGAGAACCACTTTGGAG
ATTAATCATGGGAGAAGAGCGGAACTGGATTGTGAACACCCGGATCTTGGTTTTCATGGC
TCGGAAGTTGGACCTTTTTTTGATGAGGCTACTTGGTTCAACTGGGGGGACATTCACTGC
CTTTGAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12805#0      TCGCCGCGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCC 60
consensus_12805#1      ------CGATCGCCAGCGCGACCAACGAGACTCCACGCCACGCCACGCCACCGCAACCCC 54
                             ******************************************************

consensus_12805#0      CCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGC 120
consensus_12805#1      CCTTTCCCCCACCGCGCAAGCCTCCTCCCCCCCGGAAAAAGTCGCCGCGACCGCCGCCGC 114
                       ************************************************************

consensus_12805#0      GATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGT 180
consensus_12805#1      GATGGCGGCCGCGCGCCACCGCGGCGGGGGCACCCACGCCGCCCCCCTACTCCTCGTCGT 174
                       ************************************************************

consensus_12805#0      CCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGG 240
consensus_12805#1      CCTCCTCCTGCTTTCCATGGGGCGGCTGCCGCGTGCCGCGGCGGTGGGGCTTGGGGGTGG 234
                       ************************************************************

consensus_12805#0      CCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCC 300
consensus_12805#1      CCTGGGGGAGCTGATGACGAAGGTGCCGTTCAGCCCCGGCGACGTGCTCCCGGTCCTGCC 294
                       ************************************************************

consensus_12805#0      GAGGCAGGTGTCGTGGCCCGTGATGAACACGCTCCACAGCGCCGTCGACCTGCTGCCTTC 360
consensus_12805#1      GAAGCAAGTGTCGTGGCCCGTGATGAACACGCTCCACAACGCCGTCGACCTGCTGGCTTC 354
                       ** *** ******************************* **************** ****

consensus_12805#0      CTTCGTCGCCGCCGTGGCCCCCGGGGCGGCCCCCTCCGACGCGGCGTGGAGCGGCGCCTG 420
consensus_12805#1      CTTCGTCGGCGCCGTGGGCCCCGGGGCGGCCCCCTTCGACGCGGCGTGGAGCGGCGCCTT 414
                       ******** ******** ***************** *********************** 

consensus_12805#0      CTTCGCCCGGAACGAGGCCGCGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCT 480
consensus_12805#1      GCTTGGCCCGGACGAGGCCGTGCTCGAGCTCACCCCCGGAGATCGCAACGGGACCGAGCT 474
                         * * ** * ********* ***************************************

consensus_12805#0      GAGCGGCGCCGTGCTCCGACTCAAGACTGCTTCAGCTAAGAGTTGGACATGCATGGATCT 540
consensus_12805#1      GAACGGCGCCGTGCTCCGACTTAAGACTGGTTCAGCTAAGAGT-GGACATGCATGGATCT 533
                       ** ****************** ******* ************* ****************

consensus_12805#0      CTATGTGTTTGCAACACCATATAGGATAACATGGGATTACTATTTTGCTGCTCGAGAACA 600
consensus_12805#1      CTATGGGTTGGCA-CACCATATAGGGTAACCTGGGATTACTATTTTG-TGGTCGAGAAC- 590
                       ***** *** *** *********** **** **************** ** ******** 

consensus_12805#0      CACTTTGGAGATTAAATCATGGGAAGAAGAAGCGGAACTGGAATATGTGAAGCAACACGG 660
consensus_12805#1      CACTTTGGAGATTAA-TCATGGGAGAA--GAGCGGAACTGGAT--TGTGAAC--ACCCGG 643
                       *************** ********  *   ************   ******   ** ***

consensus_12805#0      CATCTCTGTTTTTCTCATGCCATCTGGGATGCTTGGAACTTTGTTATCTTTGATTGATGT 720
consensus_12805#1      -ATCTTGGTTTT---CATG-----------GCTCGGAAGTTGG--ACCTTTTTTTGATGA 686
                        ****  *****   ****           *** **** ** *  * ****  ****** 

consensus_12805#0      CCTACCTTTGTTTTCCAATACTGGTTGGGGTCAACATTCCAACTTGGCCTTTTTGGAGAA 780
consensus_12805#1      GGCTACTTGGTTCA-----ACTGG--GGGG---ACATTC--ACT--GCCTTTGAAA---- 728
                            *** ***       *****  ****   ******  ***  ******        

consensus_12805#0      GCATATGGGAGCTTCATTTGAGAAACGTTCTCAGCCTTGGGTTACTACTATTAGGAAGGA 840
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      GGATATACATTCTGGTGATTTTTTGGCTCTATCGAAGATACGAGGACGCTGGGGTGCATT 900
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TGAGACACTAGAGAAATGGGTGACTGGTGCGTTTGCTGGGCACACCGCAGTTTGCTTGAA 960
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      AGATGAGAAGGGTGAAGTTTGGGTTGCGGAATCAGGCTTTGAAAATGAAAAGGGAGAAGA 1020
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      AATTATTGTTATAGTTCCTTGGGATGAATGGTGGGCAATGGCACTCAAGGATTCGTCAAA 1080
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TCCTCAGATAGCCCTTCTACCACTACATCCTGATGTACGGGCCAGATTCAATGAAAGTGC 1140
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      AGCATGGGACTATGCTCGAAGCATGGTTGGAAAGCCTTATGGCTATCATAACATGATATT 1200
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TAGCTGGATTGATACAATCGGAGACAATTATCCACCTCCTCTTGATGCAAACCTGGTGAT 1260
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      GGCTGTTATGTCAATGTGGACTAGGTTACAACCGCTTTATGCTGCAAACATGTGGAATGA 1320
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      AGCCCTTAACAAACGACTTGGGACTGAGGGGTTGGACCTTCATGGGATCATTGTTGAAAC 1380
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TGAAAGACGTGGGATGTCTTTTGATCAGTTGCTCACCATCCCTGAGCAAGATGAATGGGT 1440
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TTACAGTGATGGTAAATCTACAACATGTGTTGCCTTTATTCTTGCAATGTACAAGGAGGC 1500
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TGGAATATTCACGCCTTTTGCAGAGTCGATTCAGGTGACCGAGTTCACTATACGCGACGC 1560
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      GTACATGCTCAAGATTTTCGAAGATAACCAGGCCAGACTTCCAAGCTGGTGCAACACAGA 1620
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      ATCTGACAAGCTCCCCTTCTGCCAGATCCTGGGGGAGTACAGGATGGAGCTACCGGAGTA 1680
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      CAACACAATAGAACCGTATGCCAAAATGAATGAGAACTGCCCATCTTTACCCCCAACGTA 1740
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      CAAGCGGCCAGCGCGTTGCTGACACTGTGCCCCCACAACTGAAAGTAGGATGTTGTTTGA 1800
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      AAGTTTATCATGTAAGTAAATCATATTGTATATAGGTGTTTGATAGATCGCAGTTTTCAC 1860
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      ACGTAAGGAAGGTGACCCTCAGGTTTCTGCCTGTTACGAGAGCTGTTCTTGAGCTCAGGC 1920
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      ATCCAATATGAAGGACTGACCTGTCTAAGAATTTGCTCACAACACAGAACTTTGAAATGA 1980
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      TATCTACTGAAAAACTGGCTCTGATAAGTTTTCGGCTTGAGGAATCAAACCGATTCTAGA 2040
consensus_12805#1      ------------------------------------------------------------
                                                                                   

consensus_12805#0      ATAATTTCAAAGGGATAAATGCATTCTCAATTTTCTGTTAAGCCCTAAAG 2090
consensus_12805#1      --------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)