cluster # 12885

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Oryza sativa
cluster # 12885 cluster # 12885 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12885#0 length = 1266 sequences # 11
consensusID : consensus_12885#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1266
fasta sequence
                              [ACCGAAAACCGCAGCGAACGCACCTACCTACCACCCAAACGGCAAGCGGCAGTGCCAATGGAGCAGCAACAGGCGGCGCCCATGGCGA-GGAACAGGAAGGTGGTGCTGCGCGAGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGAGGCCGCCGC-CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT-ATG-AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA-CATCTTCTGCCTTGTA-CCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAAGGTTGTGTGTGTGTCACA-GGAGTTAAGTCAGTTTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCAAAATATACCT-GGGAAAAAAGTTCAAATCGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK063674             [ACCGAAAACCGCAGCGAACGCACCTACCTACCACCCAAACGGCAAGCGGCAGTGCCAATGGAGCAGCAACAGGCGGCGCCCATGGCGA GGAACAGGAAGGTGGTGCTGCGCGAGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGAGGCCGCCGC CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT ATG AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA CATCTTCTGCCTTGTA CCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAAGGTTGTGTGTGTGTCACA GGAGTTAAGTCAGTTTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCAAATTATACCT GGG                                                     ]
[+] EMBL C26689               [                   GCACCTACCTACCACCCAAACGGCAAGCGGCAGTGCCAATGGAGCAGCAACAGGCGGCGCCCATGG GATGGAACAGGAAGGTGGTGCTGCGCGAGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTNCCGGAGG CGCCGC CCCCGCCCCGGCGGTCCTCGTNAAGAATCTCTACCTCTCCTGCNACCCCTACATGCGCGGCCGGATGCGGGACTTCCANGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BP184867             [                         acgaggCACCCAAACGGCAAGCGGCAGTGCCAATGGAGCAGCAACAGGCGGCGCCCATGGCGA GGAACAGGAAGGTGGTGCTGCGCGAGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGAGGCCGCCGC CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT ATG AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK099151             [                                 CCCAAACGGCAAGCGGCAGTGCCAATGGAGCAGCAACAGGCGGCGCCCATGGCGA GGAACAGGAAGGTGGTGCTGCGCGAGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGAGGCCGCCGC CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT ATG AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA CATCTTCTGCCTTGTA CCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAAGGTTGTGTGTGTGTCACA GGAGTTAAGTCAGTTTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGA                                                                                       ]
[+] EMBL AU088575             [                                                                                                                 AGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGA GNCGCCGC CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATA CCCTCTCTTACCATTTGGGGCTTCTTGGNATGCCTGGTTTTAAAGNTAATGCTGG TTCTAATG A ATTTNCTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C27603               [                                                                                                                 AGTACATCGCCGGCC GNCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGA  CNG CGCNCCCCGCCCCGGNTNCACTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTNGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATG CTGGGTTTACAGCTTATGCTGGTTTCT ATT AGATCTNCTCACCG AGAAGGGCGAGTTT TTTTTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU166897             [                                                                                                                 AGTACATCGCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTGCGCGTGCCGGAGGCCGCCGC CCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCCTGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTCAAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCGGGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT ATG AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA764728             [                                                                                                                                                                                                                                                                                                                                                                                                       GATGACTGGTTGGGAGGAATACAGTCTGATCGACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTGGGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCT ATG AGATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCACTGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA CATCTTCTGCCTTGTA CCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGNGGNAAAAAAGNTGGCAAGAAGGTTGGGTGTGTGTCACAGGGAGNTAAGTCAGGGGACATTCTGATGAGTATCANAAANCTCTCTGAATTGAGGGGATAAGAAAAAAAGGNTTGGCTTAACAGGTTCAAAATATACCTGGGGAAAAAAGTTCAAA                                        ]
[+] EMBL AU092379             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTTTCT ATGAANATCTGCTCACCGAAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGACAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTTGAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA CATCTTCTGCCTTGTA CCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAAGGTTGTGTGTGTGTCACA GGAGTTAAGTCAGTTTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCAAAAaaaa                                                            ]
[+] EMBL BI799040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTTGAGCTCTTGAAGGGCAA TTTGGATTTGATCCAGCTTTCAACTATAAAGAGGAGCCTGACTTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTAGGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTATGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAA CATCTTCTGCCTTGTA CC AAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGC AAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAA GTTGTGTGTGTGTCACA GGAGTTAAGTCAGTGTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCAAAAaaa                                                             ]
[+] EMBL C97135               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACCCTGTAGGGACCCACAACCATCTTCTGCCTTGTACCCAAGGAGGATAAGAATGCAGGGNTTCATCCAGAGCGACCACCTCCATATGTTCCCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAAGACATGAGCATAGGGTTGGAGAATGCNCCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAAAATGTTGGCAAGAAGGTTGTGTGTGTGTCACA GGAGTTAAGTCAGTTTACATTCTGATGAGTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCAAATTATACCT GGGAAAAAAGTTCAATTCGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12885#0
ACCGAAAACCGCAGCGAACGCACCTACCTACCACCCAAACGGCAAGCGGCAGTGCCAATG
GAGCAGCAACAGGCGGCGCCCATGGCGAGGAACAGGAAGGTGGTGCTGCGCGAGTACATC
GCCGGCCGGCCGCCGAGGGAGGACGACATGGTGCTCGTCGACGGCGGCACGGTGGCCCTG
CGCGTGCCGGAGGCCGCCGCCCCCGCCCCGGCGGTCCTCGTGAAGAATCTCTACCTCTCC
TGCGACCCCTACATGCGCGGCCGGATGCGGGACTTCCACGGATCCTACATCCCGCCGTTC
AAGCCCGGATCCGTTATTGAAGGGCTTGGAGTGGCGAGAGTGGTGGATTCCACCCATCCG
GGATTCAGCGCGGGCGACATTGTCTCCGGGATGACTGGTTGGGAGGAATACAGTCTGATC
GACAGGCCTGAACAGCTGAGCAAGATTCAGCAAAGTGACATACCCCTCTCTTACCATTTG
GGGCTTCTTGGCATGCCTGGTTTTACAGCTTATGCTGGTTTCTATGAGATCTGCTCACCG
AAGAAGGGCGAGTTTGTTTTTGTTTCGGCTGCATCAGGAGCAGTTGGGCAAATTGTAGGA
CAACTCGCAAAGCTTCATGGATGCTATGTTGTGGGAAGTGCTGGAACAAATCAGAAAGTT
GAGCTCTTGAAGGGCAAGTTTGGATTTGATGCAGCTTTCAACTATAAAGAGGAGCCTGAC
TTGACTGCAGCCTTGAAAAGGTATTTCCCTGAAGGTATTGACATCTACTTTGAGAACGTA
GGTGGTCCAATGCTTGATGCTGTACTCCTCAACATGAGGACCCATGGTCGCATTGCCGTA
TGCGGGATGGTCTCTCAGAATGCGCTGACTGATCCTGTAGGGATCCACAACATCTTCTGC
CTTGTACCAAAGAGGATAAGAATGCAGGGGTTCATCCAGAGCGACCACCTCCATATGTTC
CCACAGTTTGTCAGTGACATGGCAAAGCATTACAGAGATGGCAAGATTGTGTATGTAGAA
GACATGAGCATAGGGTTGGAGAATGCACCTGCTGCGTTGGTTGGTCTATTCAGTGGAAAA
AATGTTGGCAAGAAGGTTGTGTGTGTGTCACAGGAGTTAAGTCAGTTTACATTCTGATGA
GTATCAGAAACCTCTCTGAATTGAGGTGATAAGTAATAGATGTTTGTCTTAACATGTTCA
AAATATACCTGGGAAAAAAGTTCAAATCGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
clustalw multiple alignements is not computed in this case