cluster # 12902

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Oryza sativa
cluster # 12902 cluster # 12902 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12902#0 length = 2465 sequences # 10

consensus_12902#1 length = 287 sequences # 1

consensusID : consensus_12902#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2465
fasta sequence

                              [AGTCTACGGCCGCGTTCCCTTCTCTTCCTCCTTCCTTCTTNCCTGCTGCCTGCCTAGTCTAGTCTACCACCCTCCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAGCCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCAGGCGCGGCCAGGACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGAATCTTGGGGAGGAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAAATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGATACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATTGAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTTCGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCACCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTGAGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGATGAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTCTCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAACAACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGCCGCAGGACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTTGCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAAGAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTA-TTGTGCATT-CGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTTGAAGTTGGTGTAACTTTACTGTTTTTTTCAGTGTGGAGAAACTGTAAC]

[+] EMBL OSC100301            [AGTCTACGGCCGCGTTCCCTTCTCTTCCTCCTTCCTTCTTNCCTGCTGCCTGCCTAGTCTAGTCTACCACCCTCCTNTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAGCCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCNAGGCGCGGCCAGGACCTNCGGATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK073816             [                 CCTTCTCTTCCTCCTTCCTTCTTTCCTGCTGCCTGCCTAGTCTAGTCTACCACCCTCCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAGCCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCAGGCGCGGCCAGGACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGAATCTTGGGGAGGAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAAATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGATACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATTGAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTTCGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCACCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTGAGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGATGAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTCTCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAACAACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGCCGCAGGACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTTGCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAAGAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTA TTGTGCATT CGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTTGAAGTTGGTGTAACTTTACTGTTTTTTTCAGTGTGGAGAAACTGTAAC]
[+] EMBL CF277272             [                                                                         CCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAGCCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCAGGCGCGGCCAGGACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGAATCTTGGGGAGGAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAAATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGATTGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGATACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACGCTTTATGTGCTAGAGACTCTAAGCAAAAACTGGGGGGATGGTGGTTACCAGCAAATCATTGAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCA ATTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB640162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTTCGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGCAGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCACCTCGTGAGGATAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAACCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTTCAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGAATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTGAGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGATGAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AF251071             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATGGACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGATGAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCAGGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGGGTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTCTCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCGTTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB000824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGAAGACGAGTTCTCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCTGCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAGAGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACAGAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCTCATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB000043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATTCAAAAACAGAAACGAATCCGCCGCCAAGCTATTATAGCCGGTCAGAAAGTGTGTCTGATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGCGAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAACCCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGTGAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCAGCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAACAACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGGAATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGC                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF308635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGGTACGATGGACTGGCGAGCCAAACAGAAGGCCTTTCGCTTAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU029841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACCTGAAGATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAACCAGCCAACAGCCGCA GACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTTGCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAAGAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTATTTGTGCATTCCGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGGTGTGTGTTGTGGNANCAGGATGTTTTTTTTTTTGG ACC TTGCC NATTTTTTTc                                                                                                                                   ]
[+] EMBL AU077687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAAGAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTA TTGTGCATT CGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTaaaaaa                                           ]




>consensus_12902#0
AGTCTACGGCCGCGTTCCCTTCTCTTCCTCCTTCCTTCTTNCCTGCTGCCTGCCTAGTCT
AGTCTACCACCCTCCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAG
CCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCA
GGCGCGGCCAGGACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGA
ATCTTGGGGAGGAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAA
ATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGAT
TGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGAT
ACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACG
CTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATT
GAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTT
CGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGC
AGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCA
CCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAA
CCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTT
CAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGA
ATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTG
AGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATG
GACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGAT
GAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCA
GGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGG
GTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTC
TCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCT
GCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAG
AGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACA
GAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCT
CATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCT
GATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGC
GAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAAC
CCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGT
GAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCA
GCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAAC
AACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGG
AATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAA
GATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAA
CCAGCCAACAGCCGCAGGACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTT
GCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAA
GAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTATTGT
GCATTCGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTG
TGTGTTGTGTAGTCAGGATGTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTT
CCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCAT
AGTTCAGGTTGCAATTTGAAGTTGGTGTAACTTTACTGTTTTTTTCAGTGTGGAGAAACT
GTAAC

consensusID : consensus_12902#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 287
fasta sequence

                              [GATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATAAAACGGCCG]

[+] EMBL CF302394             [GATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATAAAACGGCCG]




>consensus_12902#1
GATACATTCAGTCATGATCATAATGGGTTGTGTGTTGTGTAGTCAGGATGTTTTTTTTTT
TTGGAACCTTTGCCACATTTTTTTTCCTTTTCCATTCATGCTCCTACTTTCCTTTGCTGT
ATATATTACTCCATTTGGCAGCAATATTCATAGTTCAGGTTGCAATTTGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCAAATAAAACGGCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12902#0      AGTCTACGGCCGCGTTCCCTTCTCTTCCTCCTTCCTTCTTNCCTGCTGCCTGCCTAGTCT 60
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AGTCTACCACCCTCCTCTCCAACCTTTCTCCTTCCTCCTCATCTCCTCCTCCAAGCCGAG 120
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CCACCGAAATTCCTCCAATCCTACAGTTCGCTCGCATCTCTCCCTCTCCTCCCCGTCCCA 180
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GGCGCGGCCAGGACCTCCGGATCGGTGAAAAGAGGCCGCCTTGGTGCTTCTTGGCGCCGA 240
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      ATCTTGGGGAGGAGGTCGCTCAGATTCGGATTTAGGGTTTTTGGTGGTGAGAGGGGGAAA 300
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      ATGGCGACGGCCGTGGCGTGCGCGGAGAGGGCGACGAGCGACATGCTGATCGGGCCGGAT 360
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      TGGGCGGTGAACATCGAGCTCTGCGACATCATCAACATGGATCCCGGACAAGCCAAGGAT 420
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      ACACTCAAGCTCCTAAAGAAACGCCTGGGAAACAAGAATTCAAAAGTGCAAATTCTGACG 480
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CTTTATGTGCTAGAGACTCTAAGCAAAAACTGTGGGGATGTTGTTTACCAGCAAATCATT 540
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAGCGAGACATATTAAGTGAAATGGTTAAGATAGTAAAGAAAAAGCCAGATTTAAATGTT 600
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CGGGAGAAAATATTGAGTTTGATTGACACATGGCAAGTGGCTTTTGGAGGTGCATCTGGC 660
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AGATATCCCCAGTATCACGCTGCTTACCAAGAACTCAGGAATGCTGGTGTTGATTTTCCA 720
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CCTCGTGAGGAGAACACGGTTCCACTGTTTACACCTCCTCAAACTCAACCATTGAGGCAA 780
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CCACATCTATATCCACCTCCAGGTCAAAGCTATGAAGATGCAGCGATACAAGCTTCTCTT 840
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CAATCTAGCGCCCCTTCTGCACCTGCCTTGAGTCTAAGTGAGATTCAGAGTGCTCGAGGA 900
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      ATTGTGGATGTGTTGGATGAGATGTTAAATGCTTTGGACCACAGGCACCCTGAGGGTGTG 960
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AGGGAGGAGGTCATTGTTGACCTTGTTGGGCAGTGCCGATCTTATCAAGGTCGAGTCATG 1020
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GACCTTGTTAGCAATACTGGTGATGAGAGCCTTCTATTTCAAGCTCTCGGTTTAAATGAT 1080
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAACTGCAGCGTGTTCTTCAGCGTCATGATGACATCGCAAAGGGAGTGCCTCCCGGTTCA 1140
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GGCCCAGCTCCTGCTGCTGCTAATGTAAACCGAGGAACAGCCCCTCCTAGGCCTACTGGG 1200
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GTTTCATTTTCCCCACTTCTTAATGTGCACCATGAAGACGATGAGCCAGAAGACGAGTTC 1260
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      TCTGTTCTTTCCCGCAGGTCTGCAAGGGATGGCACAGCAGCACAGGGCAATCTACCTTCT 1320
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GCTCCAAAAAGTGAAAGGCCTTACCCAAGCCCACTTCTTCCTCCGCCACCATCATCAAAG 1380
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AGGCCAGTTTTCACGGAGGCAAGCAGTGTTGACTATCTTAGTGGCGACTCCTACAAGACA 1440
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAAAAAGTATCAGATGACTTTATTAATCCAACTGCCCCAGCCAATATACCTGCGCCGTCT 1500
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CATTCAAAAACAGAAACGAATCCGCCGCCAAGTTATGATAGCCGGTCAGAAAGTGTGTCT 1560
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GATGACTTCATAAACCCAACTGCAGCACCCAGCTTCTCTATGCCTTCTCGTCCTATGAGC 1620
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAGTCAAATCGTCCTGCTGTCAATAGGCAGGAGAGTCTACCTGATGATGATTTTATAAAC 1680
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CCAACAGCTATCCCTGGTTTTTCTTCGTCTTCAAATGCTAACAAGTATGGAGACTCCGGT 1740
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAAGATCTTCCAAAAGCTCCATGGGAAGCGCAAGCTCCAGGTTCCTTACCGCCACCTCCA 1800
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GCAAGGTATGGCCAAAGACAGCAGTACTTCGAGCAACAGCACGGCCTTCCTAGTGGTAAC 1860
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AACGGTGCCGGGTACAATGGACTGGTGAGCCAAACAGAAGGCCTTTCGCTTAATCAGAGG 1920
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      AATACCGAGAATGAGAGAGGTTCATCAGTTCCGACCGCATCACGGCAGACCAAACCTGAA 1980
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GATTCTCTTTTCAAGGATCTTGTCGATTTCGCTAAGAACAAACCGTCTTCTCCATCTAAA 2040
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      CCAGCCAACAGCCGCAGGACTCGCTGACCAATGGGTGCTAGGGAAGCACTTTGAGGAGTT 2100
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GCCAAGCTATTTGGCTTTACAGGTTTAGCGGCTTTAGAGATGATATATACCATCAAATAA 2160
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GAGTTTCAGTCTGGATTTCATTACCTTGGGAATTACTTTGGCTGTGCAAGGTGTTATTGT 2220
consensus_12902#1      ------------------------------------------------------------
                                                                                   

consensus_12902#0      GCATTCGACAGTTAGAATTCACAGATATCAGATACATTCAGTCATGATCATAATGGGTTG 2280
consensus_12902#1      ------------------------------GATACATTCAGTCATGATCATAATGGGTTG 30
                                                     ******************************

consensus_12902#0      TGTGTTGTGTAGTCAGGATGTTTTTTTTTTT-GGAACCTTTGCCACATTTTTTTTCCTTT 2339
consensus_12902#1      TGTGTTGTGTAGTCAGGATGTTTTTTTTTTTTGGAACCTTTGCCACATTTTTTTTCCTTT 90
                       ******************************* ****************************

consensus_12902#0      TCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCA 2399
consensus_12902#1      TCCATTCATGCTCCTACTTTCCTTTGCTGTATATATTACTCCATTTGGCAGCAATATTCA 150
                       ************************************************************

consensus_12902#0      TAGTTCAGGTTGCAATTTGAAGTTGGTGTAACTTTACTGTTTTTTTCAGTGTGGAGAAAC 2459
consensus_12902#1      TAGTTCAGGTTGCAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 210
                       *********************        **    *           *      * *** 

consensus_12902#0      TGTAAC------------------------------------------------------ 2465
consensus_12902#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG 270
                          **                                                       

consensus_12902#0      -----------------
consensus_12902#1      GGCAAATAAAACGGCCG 287