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Oryza sativa
cluster # 12918 cluster # 12918       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12918#0 length = 2651 sequences # 5  
 consensus_12918#1 length = 1551 sequences # 5  
consensus_12918#2 length = 680 sequences # 1  
consensusID : consensus_12918#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2651
fasta sequence 
                              [CACACCGTCACAGCCTCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGCCTCCACGCCGCCGTCGCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCAACCGTCACAGCCTCCACGCCGTCGTCGCCGCCCCCCGGACTCCACCGCATCCACGCCGGCGTCGCCGCAGCGGGAGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCTTAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGTGAGCAGCTTTCTAGACCTCTTTGCAATTTTGTTTGGTCTTTGTTTATTCCTTGCAAATTGTAGGCTGACATCGCCATCATCTGATTGTTTATCAGACCTGATCGTTTAGTTTAGTTTTTTTTTTTTTTTTTTGCATTGCATCAACGTGAGGACGCTTCATAATTAGGGAGAAACTGTGGGTAAAAAGAATTCCAGGTGCCAAATGCGTGGGTAAAAAGAATCATGGACTGATATTATAGGAGACATTGAAATGTTTCATGAACTGTGAAAATAAATATTTGATTCAATGAGGCTGTTCACAGTCTGAAAACAATGTTCTGTTGATAGGCTTCAACCTTTCATTTGTAGCTGCAGCCATATACGCACAAATTTCATTAAAGCTTGGTGCTCTCAGCACTTAAATGCCAAAACAGATCTCAATTCGTATATGACCTGAGTTTTTTTTTTTTTTGAAAGATGGGCAAAAGCTTTGCCTCCTTTGTATTAATAGAGAAGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTGGGCATTTGTAACAAGAAATTTAGATGTGTCAGAGGAATAGCTCATTAACCAGAACATAATTGGTTTATCAACCAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTCTGGCTTTACTCCTGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTGCTCTT-GCTAGGTTGTGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGACATCCCTTACTGGATTATTTTGACATGATTGCTATGAGAATATGGCCGAGTTTAGTTCCAAACTTTTTATTCAAACTTCCAACTTTTTTATCACATCAAAACTTTCCT--ACACATAAACTTCCAACTTTTCCGTCATATCATTCCAATTTCAATCAAACTTCCAATTTCGGCGTGAACTAAACACACCCTGTGTGTTGGAATTCTTTTCAGGCTGTTTTCCATATAGCCAAGTAAAACTCGTAGGCAATGTAATGGTAGTAACAAGTAATGTATTCCTCACAGTGATATTTCACCATGCTATCATTCTTTACGAGCATCTTGTGAATGGTTTCAGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAATATAATATAATAAATTTGTGCGGAGGTTTCTGGATGAGCCTCTTAT]

[+] EMBL AK122114             [CACACCGTCACAGCCTCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGCCTCCACGCCGCCGTCGCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCAACCGTCACAGCCTCCACGCCGTCGTCGCCGCCCCCCGGACTCCACCGCATCCACGCCGGCGTCGCCGCAGCGGGAGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCTTAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGTGAGCAGCTTTCTAGACCTCTTTGCAATTTTGTTTGGTCTTTGTTTATTCCTTGCAAATTGTAGGCTGACATCGCCATCATCTGATTGTTTATCAGACCTGATCGTTTAGTTTAGTTTTTTTTTTTTTTTTTTGCATTGCATCAACGTGAGGACGCTTCATAATTAGGGAGAAACTGTGGGTAAAAAGAATTCCAGGTGCCAAATGCGTGGGTAAAAAGAATCATGGACTGATATTATAGGAGACATTGAAATGTTTCATGAACTGTGAAAATAAATATTTGATTCAATGAGGCTGTTCACAGTCTGAAAACAATGTTCTGTTGATAGGCTTCAACCTTTCATTTGTAGCTGCAGCCATATACGCACAAATTTCATTAAAGCTTGGTGCTCTCAGCACTTAAATGCCAAAACAGATCTCAATTCGTATATGACCTGAGTTTTTTTTTTTTTTGAAAGATGGGCAAAAGATTTGCCTCCTTTGTATTAATAGAGAAGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTGGGCATTTGTAACAAGAAATTTAGATGTGTCAGAGGTATAGCTCATTAACCAGAACATAATTGGTTTATCAACCAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTCTGGCTTTACTCCTGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTGCTCTT GCTAGGTTGTGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGACATCCCTTACTGGATCATTTTGACATGATTGCTATGAGAATATGGCCGAGTTTAGTTCCAAACTTTTTATTCAAACTTCCAACTTTTTTATCACATCAAAACTTTCCT  ACACATAAACTTCCAACTTTTCCGTCATATCATTCCAATTTCAATCAAACTTCCAATTTCGGCGTGAACTAAACACACCCTGTGTGTTGGAATTCTTTTCAGGCTGTTTTCCATATAGCCAAGTAAAACTCGTAGGCAATGTAATGGTAGTAACAAGTAATGTATTCCTCACAGTGATATTTCACCATGCTATCATTCTTTACGAGCATCTTGTGAATGGTTTCAGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAATATAATATAATAAATTTGTGCGGAGGTTTCTGGATGAGCCTCTTAT]
[+] EMBL CA754322             [CACACCGTCACAGCCTCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGCCTCCACGCCGCCGTCGCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCAACCGTCACAGCCTCCACGCCGTCGTCGCCGCCCCCCGGACTCCACCGCATCCACGCCGGCGTCGCCGCAGCGGGAGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGAC ACTTTCTGCAGCCGCCGATCGCCAGACACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB653152             [     CGTCACATCCTCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGCCTCCACGCCGCCGTCGCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCAACCGTCACAGCCTCCACGCCGTCGTCGCCGCCCCCCGGACTCCACCGCATCCACGCCGGCGTCGCCGCAGCGGGAGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTCTCTTAATATACATGTATATATTTTCATATATGCAAACATTGCGATGCGACATTATCTATTACAACACTGAAAGTTTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA759286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTTTTTTTTTTTTGCATTGCATCAACGTGAGGACGCTTCATAATTAGGGAGAAACTGTGGGTAAAAAGAATTCCAGGTGCCAAATGCGTGGGTAAAAAGAATCATGGACTGATATTATAGGAGACATTGAAATGTTTCATGAACTGTGAAAATAAATATTTGATTCAATGAGGCTGTTCACAGTCTGAAAACAATGTTCTGTTGATAGGCTTCAACCTTTCATTTGTAGCTGCAGCCATATACGCACAAATTTCATTAAAGCTTGGTGCTCTCAGCACTTAAATGCCAAAACAGATCTCAATTCGTATATAACCTGA     TTTTTTTTTTGAAAGATGGGCAAAAGCTTTGCCTCCTTTGTATTAATAGAGAAGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTGGGCATTTGTAACAAGAAATTTAGATGTGTCAGAGGAATAGCTCATTAACCAGAACATAATTGGTTTATCAACCAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTCTGGCTTTACTCCTGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTGCTCTTNGCTAGGTTGNGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGACATCCCTTACTGGATTATTTTGACATGATTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB627732             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGATGGGCAAAAGCTTTGCCTCCTTTGTATTAATAGAGAAGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTGGGCATTTGTAACAAGAAATTTAGATGTGTCAGAGGAATAGCTCATTAACCAGAACATAATTGGTTTATCAACCAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTCTGGCTTTACTCCTGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTGCTCTT GCTAGGTTGTGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGACATCCCTTACTGGATTATTTTGACATGATTGCTATGAGAATATGGCCGAGTTTAGTTCCAAACTTTTTATTCAAACTTCCAACTTTTTTATCACATCAAAACTTTCCTACACACATAAACTTCCAACTTTTCCGTCATATCATTCCAATTTCAATCAAACTTCCAATTTCGGCGTGAACTAAACACACCCTGTGTGTTGGAATTCTTTTCAGGCTGTATTCCATATAGCCAAGTAAAACTCGTAGGCAATGTAATAGTAGTAACAAGTAATGTATTCCTCACAGTGATATTTCACCATGCTATCATTCTTTACGAGCATCTTGTGAATGGTTTCAGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACAGAACTTATACCATCTATTTTCTT                                                                                                                      ]




>consensus_12918#0
CACACCGTCACAGCCTCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGC
CTCCACGCCGCCGTCGCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCA
ACCGTCACAGCCTCCACGCCGTCGTCGCCGCCCCCCGGACTCCACCGCATCCACGCCGGC
GTCGCCGCAGCGGGAGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTC
TCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCAC
AGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCG
TTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGT
GTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGG
CTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGC
AGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAG
TAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAG
CAGAACTTTTTTCTTAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGA
CATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACT
TACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATA
CCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACAT
CATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGT
AGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGT
TTCAACAAATCGCCATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGAT
CTTCTGCCGACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTG
GCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGAT
CTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGTG
AGCAGCTTTCTAGACCTCTTTGCAATTTTGTTTGGTCTTTGTTTATTCCTTGCAAATTGT
AGGCTGACATCGCCATCATCTGATTGTTTATCAGACCTGATCGTTTAGTTTAGTTTTTTT
TTTTTTTTTTTGCATTGCATCAACGTGAGGACGCTTCATAATTAGGGAGAAACTGTGGGT
AAAAAGAATTCCAGGTGCCAAATGCGTGGGTAAAAAGAATCATGGACTGATATTATAGGA
GACATTGAAATGTTTCATGAACTGTGAAAATAAATATTTGATTCAATGAGGCTGTTCACA
GTCTGAAAACAATGTTCTGTTGATAGGCTTCAACCTTTCATTTGTAGCTGCAGCCATATA
CGCACAAATTTCATTAAAGCTTGGTGCTCTCAGCACTTAAATGCCAAAACAGATCTCAAT
TCGTATATGACCTGAGTTTTTTTTTTTTTTGAAAGATGGGCAAAAGCTTTGCCTCCTTTG
TATTAATAGAGAAGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTG
GGCATTTGTAACAAGAAATTTAGATGTGTCAGAGGAATAGCTCATTAACCAGAACATAAT
TGGTTTATCAACCAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTC
TGGCTTTACTCCTGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTG
CTCTTGCTAGGTTGTGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGA
CATCCCTTACTGGATTATTTTGACATGATTGCTATGAGAATATGGCCGAGTTTAGTTCCA
AACTTTTTATTCAAACTTCCAACTTTTTTATCACATCAAAACTTTCCTACACATAAACTT
CCAACTTTTCCGTCATATCATTCCAATTTCAATCAAACTTCCAATTTCGGCGTGAACTAA
ACACACCCTGTGTGTTGGAATTCTTTTCAGGCTGTTTTCCATATAGCCAAGTAAAACTCG
TAGGCAATGTAATGGTAGTAACAAGTAATGTATTCCTCACAGTGATATTTCACCATGCTA
TCATTCTTTACGAGCATCTTGTGAATGGTTTCAGGAACAGAGCAAATGGATTGCAGTTAA
GAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTT
TGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATAC
CATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGC
TTGATAGCCAAAATAAAAAGAGAAATATAATATAATAAATTTGTGCGGAGGTTTCTGGAT
GAGCCTCTTAT

consensusID : consensus_12918#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1551
fasta sequence 
                              [AGCAATGCCGCGTGGAGGTGGAAGGCCCACGGGTCGTCAACTTCTTTTCTCGGAGAAGAAACAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCTTAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCT-CCTC-TCTCTATCCATCAGTTG-CCTGCC-GACGA-TCTTCTG-CCG-ACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAATATAATATCATACAAAAAGGGA]

[+] EMBL CB671808             [AGCAATGCCGCGTGGAGGTGGAAGGCCCACGGGTCGTCAACTTCTTTTCTCGGAGAAGAAACAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTCTTCTCCCTCCCGCGTGGTCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCTTAATATACATGTATATATTTTCATATATGCAAACATTGNGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB653153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCT CCTC TCTCTATCCATCAGTTG CCTGCC GACGA TCTTCTG CCG ACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGGTAGCCAAAATAAAAAGAGAAATATAATATCATACAAAAAGGGA]
[-] EMBL CB659475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCT CCTC TCTCTATCCATCAGTTG CCTGCC GACGA TCTTCTG CCG ACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAATATAATAT              ]
[-] EMBL CB671809             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACATTGGGATGCGACATTATCTATTTCAACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCT CCTC TCTCTATCCATCAGTTG CCTGCC GACGA TCTTCTG CCG ACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTAGTGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGG TAAGGGATAGCCAAAATAAAAAGAGAAATATAATATC T  AAAAAGGa ]
[+] EMBL BI811844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gtCCTCCCTCTTCTCTATCCATCATTTGCCCTGCCTGACGATTCTTCTGCCCGTACGAAGT CT CTGTCC CCGCGATC TTTGCATAC CCAC CCAC TTT GCCTTCTCAGATGATCGCTGGGAA GCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGC ATTTTCCCCTTTACTGTACAGAACTTATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGC TTGTGTC CTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAATATAATAaaaa           ]




>consensus_12918#1
AGCAATGCCGCGTGGAGGTGGAAGGCCCACGGGTCGTCAACTTCTTTTCTCGGAGAAGAA
ACAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGA
CAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCA
AGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGA
GTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTCTTCTCCCTCCCGCGTGGTCCCT
CCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAACGCCAC
GGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCACCGGT
CGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGATGAAT
GTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTCTCCAG
CAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCCAGACA
CATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTCATATG
GTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCTTAATA
TACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCAACACT
GAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATATAGGAA
TAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTCTTTTA
TCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTTGAGAT
GATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGTCAATG
AAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACC
CTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCT
GCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCT
GGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGATGGTC
TACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAG
TTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCAC
TTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTT
ATACCATCTATTTTCTTAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGG
TTGCTTGATAGCCAAAATAAAAAGAGAAATATAATATCATACAAAAAGGGA

consensusID : consensus_12918#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 680
fasta sequence 
                              [GAGAAGTTAATAGCCAAAGCAATAGGTTGCACGCTCTCAGGTGCGAGGCCACACCACAGCTGTTCAATATGGCCGTTGTTAAAAGGCCAGCCTGCCGTTCAAGATGTTAGCAGGCCTGGGCACGCGGCCAACTCCGGAATGCATTAAAAGGCATCGGAATCGGCCCGGCGGGGACGGATTGGGGGCCTGCATTTTGCCAATGCGGAAATGGTGTTGAATTAATGTCAATAAANNTTATAAAAAAGACCTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATGGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACT]

[-] EMBL AW155408             [GAGAAGTTAATAGCCAAAGCAATAGGTTGCACGCTCTCAGGTGCGAGGCCACACCACAGCTGTTCAATATGGCCGTTGTTAAAAGGCCAGCCTGCCGTTCAAGATGTTAGCAGGCCTGGGCACGCGGCCAACTCCGGAATGCATTAAAAGGCATCGGAATCGGCCCGGCGGGGACGGATTGGGGGCCTGCATTTTGCCAATGCGGAAATGGTGTTGAATTAATGTCAATAAANNTTATAAAAAAGACCTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATGGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCTTAAATGTCAAATACT]




>consensus_12918#2
GAGAAGTTAATAGCCAAAGCAATAGGTTGCACGCTCTCAGGTGCGAGGCCACACCACAGC
TGTTCAATATGGCCGTTGTTAAAAGGCCAGCCTGCCGTTCAAGATGTTAGCAGGCCTGGG
CACGCGGCCAACTCCGGAATGCATTAAAAGGCATCGGAATCGGCCCGGCGGGGACGGATT
GGGGGCCTGCATTTTGCCAATGCGGAAATGGTGTTGAATTAATGTCAATAAANNTTATAA
AAAAGACCTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCCATACCCTGTGCCTCCT
CTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAAGTGCTGCTGTCCGCCG
CGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGATCGCTGGGAAGGCCTC
ACGGCCCTTCCCCCTGATGGACTGCTTGATCTACCTCGACACGATGGTCTACAGCAAGGC
TGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGCAAATGGATTGCAGTTAAGAAATGC
TTATCGATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATT
ATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTAT
TTTCTTAAATGTCAAATACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12918#0      ---------------------------------------------CACACCGTCACAGCC 15
consensus_12918#1      AGCAATGCCGCGTGGAGGTGGAAGGCCCACGGGTCGTCAACTTCTTTTCTCGGAGAAGAA 60
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TCCACGCCACCGTCGCCGGCCCCCCGCTTTCCCCGACTCTACCGCCTCCACGCCGCCGTC 75
consensus_12918#1      ACAATGACGGTATC-TGAGGAATAAGCATCGGCTAACTCTGT-GCCAGCA-GCCGCGGTA 117
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      GCTGCCGCCCTTCTCCCCTCCCCCCCTTTTCCCCCACGCCATCCAACCGTCACAGCCTCC 135
consensus_12918#1      AGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTT 177
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      ACGCCGTCGTCGCCGCCCCCC-GGACTCCACCGCATCCACGCCGGCGTCGCCGCAGCGGG 194
consensus_12918#1      TCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCT 237
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AGAAGGAGGTCTCCGCGCGACGGATTCCGGAGACGCCGCGGTCTTCTCCCTCCCGCGTGG 254
consensus_12918#1      GGAGTACGGTAGGGGCAGAGGGAATTTCCGG--TGGAGCGGTCTTCTCCCTCCCGCGTGG 295
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAAC 314
consensus_12918#1      TCCCTCCATCACCACCGATTGACCGCCTCCACGATGCCGCCTCCACAGGAGCAGGGGAAC 355
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      GCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCA 374
consensus_12918#1      GCCACGGCCTTCTCCCTCTCCCGCGCGGTCCTCCCCATCAACGCCGTTTCACCGGCTCCA 415
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      CCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGA 434
consensus_12918#1      CCGGTCGCTGTCCAGGCCGCCGCCACCTCAGCTGGGTATTATCTGTGTCTGATGATTTGA 475
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTC 494
consensus_12918#1      TGAATGTTGGATCGAAGGTTTGAATAGAACGGTGATTAGCTGCTGGCTGTCGGGTACTTC 535
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCC 554
consensus_12918#1      TCCAGCAGCCGCCGCCGCTGATCTTCTTCCCAGGACAACTTTCTGCAGCCGCCGATCGCC 595
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTC 614
consensus_12918#1      AGACACATATCACTTGTTCATGGTTATTTAATTCAAGGCTACTTAGTAGTATATGTTCTC 655
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      ATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCT 674
consensus_12918#1      ATATGGTCTTTAGTACAGTCAGTCTATCATGCATATTATGCTGCAGCAGAACTTTTTTCT 715
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCA 734
consensus_12918#1      TAATATACATGTATATATTTTCATATATGCAAACATTGGGATGCGACATTATCTATTTCA 775
consensus_12918#2      ------------------------------------------GAGAAGTTAATAGCCAAA 18
                                                                 * **  ***        *

consensus_12918#0      ACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATAT 794
consensus_12918#1      ACACTGAAAGTTTCTGAAAAATATAAGATAGGGAAGTCTGAAAACTTACTATCACAATAT 835
consensus_12918#2      GCAATAGG-----TTGCACGCTCTCAGGT-GCGAGGCCACACCACA-GCTGTT-CAATAT 70
                        ** *         ** *   * * ** * * ** * *  *  **   ** *  ******

consensus_12918#0      AGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTC 854
consensus_12918#1      AGGAATAATAGGGAGGTCTATGGCCCTCAATTTCCTCTGTTCTATACCTCTATGTAATTC 895
consensus_12918#2      GGCCGTTGTTAAAAGGCC---AGCCTGCCGTTCAAGATGTTA-GCAGGCCTGGGCA-CGC 125
                        *   *  *    *** *    ***  *  **     ****    *   **  * *   *

consensus_12918#0      TTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTT 914
consensus_12918#1      TTTTATCTGATAGTTTTATATATCACCACCAAATTCATATATACATCATATATAATCTTT 955
consensus_12918#2      GGCCAACTCCGGAATGCATTAAAAGGCATCGGAATCG---GCCCGGCGGGGACGGATTGG 182
                           * **      *  **  *    ** *  * **       *  *    *     *  

consensus_12918#0      GAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGT 974
consensus_12918#1      GAGATGATATTTTATATAGTGTAGTCTTACCAATTTCTTTTGTAGTAGATCTGAACACGT 1015
consensus_12918#2      GGGCCTGCATTTTGC-CAATGCGG-------AAATGGTGTTGAATTA---------ATGT 225
                       * *     *****    * **  *       ** *  * *** * **         * **

consensus_12918#0      CAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCC 1034
consensus_12918#1      CAATGAAGGGTATTAATAATGACTTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCC 1075
consensus_12918#2      CAATAAANNTTAT-AAAAAAGACCTGTTTGTTTTCTGCATTGTAGTTTCAACAAATCGCC 284
                       **** **   *** ** ** *** ************************************

consensus_12918#0      ATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAA 1094
consensus_12918#1      ATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAA 1135
consensus_12918#2      ATACCCTGTGCCTCCTCTCTCTATCCATCAGTTGCCTGCCGACGATCTTCTGCCGACGAA 344
                       ************************************************************

consensus_12918#0      GTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGA 1154
consensus_12918#1      GTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGA 1195
consensus_12918#2      GTGCTGCTGTCCGCCGCGATCTTTTGCATACGCCACGCCACGTTTGGCCTTCTCAGATGA 404
                       ************************************************************

consensus_12918#0      TCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGA 1214
consensus_12918#1      TCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATCGACTGCTTGATCTACCTCGACACGA 1255
consensus_12918#2      TCGCTGGGAAGGCCTCACGGCCCTTCCCCCTGATGGACTGCTTGATCTACCTCGACACGA 464
                       ********************************** *************************

consensus_12918#0      TGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGTGAGCAGCTTTCTAGA 1274
consensus_12918#1      TGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGC------AA 1309
consensus_12918#2      TGGTCTACAGCAAGGCTGCAGTGCGGTCATGAGGTCCACCTTGGAACAGAGC------AA 518
                       ********************************************     ***       *

consensus_12918#0      CCTCTTTGCAATTTTGTTTGGTCTTTGTTTATTCCTTGCAAATTGTAGGCTGACATCGCC 1334
consensus_12918#1      ATGGATTGCAGTTAAGA--AATGCTTATCGATATTCAACATTTCTTAGGTCAGC-TGGTC 1366
consensus_12918#2      ATGGATTGCAGTTAAGA--AATGCTTATCGATATTCAACATTTCTTAGGTCAGC-TGGTC 575
                            ***** **  *     *  ** *  **      **  *  ****    * * * *

consensus_12918#0      ATCATCTGATTGTTTATCAGACCTGATCGTTTAGTTTA-GTTTTTTTTTTTTTTTTTTGC 1393
consensus_12918#1      AGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTT 1426
consensus_12918#2      AGAGGCTGGGTCACTTTTTGGCATTATTGAGCAGAAGATGTTCTCGCAATTTTCCCCTTT 635
                       *    ***  *   * *  * * * ** *   **   * *** *     ****    *  

consensus_12918#0      ATTGCATCAACGTGAGGACGCTTCATAATTAGGGAGAAACTGTGGGTAAAAAGAATTCCA 1453
consensus_12918#1      ACTGTACTGAACTTATACCATCTATTTTCTT------AAATGTCAA-ATACTTAATTGAG 1479
consensus_12918#2      ACTGTACTGAACTTATACCATCTATTTTCTT------AAATGTCAA-ATACT-------- 680
                       * ** *   *  * *   *   *  *   *       ** ***    * *          

consensus_12918#0      GGTGCCAAATGCGTGGGTAAAAAGAA-TCATGGACTGATATTATAGGAGACATTGAAATG 1512
consensus_12918#1      ACTGC--ATTGTGTCACTGACGGTTGCTTGATAGCCAAAATAAAAAGAGAAAT-ATAATA 1536
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TTTCATGAACTGTGAAAATAAATATTTGATTCAATGAGGCTGTTCACAGTCTGAAAACAA 1572
consensus_12918#1      TCATACAAAAAGGGA--------------------------------------------- 1551
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGTTCTGTTGATAGGCTTCAACCTTTCATTTGTAGCTGCAGCCATATACGCACAAATTTC 1632
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      ATTAAAGCTTGGTGCTCTCAGCACTTAAATGCCAAAACAGATCTCAATTCGTATATGACC 1692
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGAGTTTTTTTTTTTTTTGAAAGATGGGCAAAAGCTTTGCCTCCTTTGTATTAATAGAGA 1752
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AGGAGCTGAGTTATTGGTCTGAGTGTCTTGGATCTTATTAGGAAACTGGGCATTTGTAAC 1812
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AAGAAATTTAGATGTGTCAGAGGAATAGCTCATTAACCAGAACATAATTGGTTTATCAAC 1872
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      CAGATATAATGCACATTATCAATGAAATAGACCCTCTACCAGCCTCTCTGGCTTTACTCC 1932
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGATATTGAGGAACTTTTATTATTTTTTTATGGGTAGTATAAAGCTTGCTCTTGCTAGGT 1992
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGTGGTTATTAAACAAAATTTAGAAGCTTCACATCTGATACATGCTGACATCCCTTACTG 2052
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      GATTATTTTGACATGATTGCTATGAGAATATGGCCGAGTTTAGTTCCAAACTTTTTATTC 2112
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AAACTTCCAACTTTTTTATCACATCAAAACTTTCCTACACATAAACTTCCAACTTTTCCG 2172
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TCATATCATTCCAATTTCAATCAAACTTCCAATTTCGGCGTGAACTAAACACACCCTGTG 2232
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGTTGGAATTCTTTTCAGGCTGTTTTCCATATAGCCAAGTAAAACTCGTAGGCAATGTAA 2292
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TGGTAGTAACAAGTAATGTATTCCTCACAGTGATATTTCACCATGCTATCATTCTTTACG 2352
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      AGCATCTTGTGAATGGTTTCAGGAACAGAGCAAATGGATTGCAGTTAAGAAATGCTTATC 2412
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      GATATTCAACATTTCTTAGGTCAGCTGGTCAGAGGCTGGGTCACTTTTTGGCATTATTGA 2472
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      GCAGAAGATGTTCTCGCAATTTTCCCCTTTACTGTACTGAACTTATACCATCTATTTTCT 2532
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      TAAATGTCAAATACTTAATTGAGACTGCATTGTGTCACTGACGGTTGCTTGATAGCCAAA 2592
consensus_12918#1      ------------------------------------------------------------
consensus_12918#2      ------------------------------------------------------------
                                                                                   

consensus_12918#0      ATAAAAAGAGAAATATAATATAATAAATTTGTGCGGAGGTTTCTGGATGAGCCTCTTAT 2651
consensus_12918#1      -----------------------------------------------------------
consensus_12918#2      -----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)