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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1164 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGGCACAAACAAAGCCACCCAAAAAAGTTGGGGAGAGGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCAT-CGGCGTCGAGTTCGCCA-CCCGCAGCATCCACGTCGACGACAAGGTCGTC-AAGGCCCAGATCTGGGACACCGCCGGG-CAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK109344 [TTCCTCGAGCACTGTTGGCCTACTGGGCACAAACAAAGCCACCCAAAAAAGTTGGGGAGAGGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCAT CGGCGTCGAGTTCGCCA CCCGCAGCATCCACGTCGACGACAAGGTCGTC AAGGCCCAGATCTGGGACACCGCCGGG CAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AU057092 [ cCCAAGTCCACCATCCGGCGTCGAGTTCCCCACCCCGCAGCACCCACGTCGACGACAAGGTCGTCNAAGCCCCAGATCTGGGACNCCCCCGGGCCAAGAAAGATATCGAGCTATTNCAAGCGCATACTATCCCGGAGCAGTAGGNGCACTCGTTGTCTATGATGTCACGCGACATGTCNCCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAAaaaaa ]
[+] EMBL CB096726 [ ACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGGTTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGGTACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTT ]
consensusID : consensus_12967#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1116 fasta sequence
[AAAGCCACCCAAAAAAGTTGGGGAGAGGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCA-AGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAG-TAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGA-GGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGT-GCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGC-AAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGAC-AACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTATATGTTGCTGTCTATTTTTCAGTAAAAA]
[+] EMBL AK073075 [AAAGCCACCCAAAAAAGTTGGGGAGAGGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCA AGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAG TAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGA GGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGT GCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGC AAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTATATGTTGCTGTCTATT ]
[+] EMBL AU057091 [ TGGGGAGAGGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTNCCCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCA GCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCA AGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAG TAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGA GGATGCGAAAG ATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGT GCTCANCCAGATATATCATGTAGTGAGCAAGAAGG TCTTGAC ]
[+] EMBL OSC478 [ cgCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGT G CANAGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGA AGTTAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGGATGCG AANATTTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGA ]
[+] EMBL C91586 [ AAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCA AGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGA NAG TAGGGGCACTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGA GGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGA ]
[+] EMBL BI806535 [ atCGAAAGCATTT CTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGT GCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGC AAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGAC AACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCATTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTATATGTTGCTGTCTATTTTTCAGTAAAAA]
[-] EMBL CB238415 [ AC AACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTT ]
consensusID : consensus_12967#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 844 fasta sequence
[CGCGACAAACGCTCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCAAGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCGCTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATTGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACTCTAGGGCTTGCTCTACTGATGATTCAAAAGCATTTGCTGAAAAAGAGAACACTTTTTTCTTTGAGACGTTTGTCCTGGAGTCAATGAATGGGGAGAATGGTTTAACTGAAGTGCTCAACCAGCAATTTATTTATATGGGCAAAATGTTATTGCTTATTGTTCATGAACCATTGGATCCATCAAAGGGGTTAGACTTTTTATGTTGGGGTACAAAATTATTCTCTCTTCAGAATAAAAGTTGTCTTGTGTTATTTCGCCGTTTTGCAATAGTGTTTGACCCTCTTTGGGATTCCTTAGTGGTTATTCTTATCTTATTAGACCAATTTGGTTATT]
[+] EMBL BE039940 [CGCGACAAACGCTCTCCCCTCCCCTCCCCCTCCGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTGAGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCTCTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTTCACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCGCAGCATCCACGTCGACGACAAGGTCGTCAAGGCCCAGATCTGGGACACCGCCGGGCAAGAAAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCGCTCGTTGTCTATGATGTCACGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATTGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACTCTAGGGCTTGCTCTACTGATGATTCAAAAGCATTTGCTGAAAAAGAGAACACTTTTTTCTTTGAGACGTTTGTCCTGGAGTCAATGAATGGGGAGAATGGTTTAACTGAAGTGCTCAACCAGCAATTTATTTATATGGGCAAAATGTTATTGCTTATTGTTCATGAACCATTGGATCCATCAAAGGGGTTAGACTTTTTATGTTGGGGTACAAAATTATTCTCTCTTCAGAATAAAAGTTGTCTTGTGTTATTTCGCCGTTTTGCAATAGTGTTTGACCCTCTTTGGGATTCCTTAGTGGTTATTCTTATCTTATTAGACCAATTTGGTTATT]
consensusID : consensus_12967#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence
[GTCCGCCATTGGCGACGCAGCCTCGTGCCGAATTCGGCACGAGGGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAG]
[-] EMBL CA999217 [GTCCGCCATTGGCGACGCAGCCTCGTGCCGAATTCGGCACGAGGGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGGATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACCTTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCATGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCCAGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCACCAAAGGGGCAGACCATCAATGTTGGTGGCAAAGATGATGTCTCTGCAGTGAAAAAGTCTGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTGGTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCATGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAATCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12967#0 TTCCTCGAGCACTGTTGGCCTACTGGGCACAAACAAAGCCACCCAAAAAAGTTGGGGAGA 60
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 -----------------------------AAAGCCACCCAAAAAAGTTGGGGAGAGGAGA 31
consensus_12967#2 ------------------------------------------------------------
consensus_12967#0 GGAGAGACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCCTC 120
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 GACCGAGATCGATCCGCACCCACCGCGACAAACGCTCTCCCCTCCCCTCCCCTCCCCCTC 91
consensus_12967#2 ----------------------------CGCGACAAACGCTCTCCCCTCCCCTCCCCCTC 32
consensus_12967#0 CGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTG 180
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 CGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTG 151
consensus_12967#2 CGCCCTTCGCTCCCATCCGCTCCGCCCCCTCGCCGCGCAGCGCCGGCGGCGAGAAGGTTG 92
consensus_12967#0 AGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCT 240
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 AGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCT 211
consensus_12967#2 AGTTCGTGGGGGGTGTGACCGAACGATGGCGTACCGGGCGGACGACGACTACGACTACCT 152
consensus_12967#0 CTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTT 300
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 CTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTT 271
consensus_12967#2 CTTCAAGGTGGTGCTCATCGGGGACTCCGGGGTCGGGAAGTCGAACCTGCTGTCCCGCTT 212
consensus_12967#0 CACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCG 360
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 CACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCG 331
consensus_12967#2 CACGCGCAACGAGTTCAGCCTCGAGTCCAAGTCCACCATCGGCGTCGAGTTCGCCACCCG 272
consensus_12967#0 CAGCATCCACGTCGACGACAAGGTCGTCAAGGCCCAGATCTGGGACACCGCCGGGCAAGA 420
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 CAGCATCCACGTCGACGACAAGGTCGTCAAGGCCCAGATCTGGGACACCGCCGGGCAAGA 391
consensus_12967#2 CAGCATCCACGTCGACGACAAGGTCGTCAAGGCCCAGATCTGGGACACCGCCGGGCAAGA 332
consensus_12967#0 AAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCACTCGTTGTCTA 480
consensus_12967#3 ----------------------GTCCGCCATTG----GCGACGCAGCCTCGTGCCGAATT 34
consensus_12967#1 AAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCACTCGTTGTCTA 451
consensus_12967#2 AAGATATCGAGCTATTACAAGCGCATACTATCGCGGAGCAGTAGGGGCGCTCGTTGTCTA 392
* * ** * ** * * * * * *
consensus_12967#0 TGATGTCACG-CGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGG 539
consensus_12967#3 CGGCACGAGGGCGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGG 94
consensus_12967#1 TGATGTCACG-CGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGG 510
consensus_12967#2 TGATGTCACG-CGACATGTCACCTTTGAGAATGTGGAGAGGTGGATGAGGGAGCTCAAGG 451
* * * *************************************************
consensus_12967#0 ATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACC 599
consensus_12967#3 ATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACC 154
consensus_12967#1 ATCACACGGACGCCAACATCGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACC 570
consensus_12967#2 ATCACACGGACGCCAACATTGTGATCATGCTTGTGGGGAACAAGGCAGATTTGCGCCACT 511
******************* ***************************************
consensus_12967#0 TTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCA 659
consensus_12967#3 TTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCA 214
consensus_12967#1 TTAGGGCTGTCTCGACTGAGGATGCGAAAGCATTTGCTGAGAAAGAGAACACTTTCTTCA 630
consensus_12967#2 CTAGGGCTTGCTCTACTGATGATTCAAAAGCATTTGCTGAAAAAGAGAACACTTTTTTCT 571
******* *** ***** *** * ************** ************** ***
consensus_12967#0 TGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCC 719
consensus_12967#3 TGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCC 274
consensus_12967#1 TGGAGACGTCGGCCCTGGAGTCAATGAATGTGGAGAATGCCTTCACTGAAGTGCTCACCC 690
consensus_12967#2 TTGAGACGTTTGTCCTGGAGTCAATGAATGGGGAGAATGGTTTAACTGAAGTGCTCAACC 631
* ******* * ***************** ******** ** ************* **
consensus_12967#0 AGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCAC 779
consensus_12967#3 AGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCAC 334
consensus_12967#1 AGATATATCATGTAGTGAGCAAGAAGGCTCTTGACATCGGCGATGACCCAGCTGCACCAC 750
consensus_12967#2 AGCAATTTATTTATATGGGCAAAATGTTATTGCTTATTGTTCATGAACCATTGGATCCAT 691
** ** * * ** **** * * * ** * **** *** * ***
consensus_12967#0 CAAAGGGGC-AGACCATCAATGTTGGTG-GCAAAGATGATGTCTCTGCAGTGAAAAAGTC 837
consensus_12967#3 CAAAGGGGC-AGACCATCAATGTTGGTG-GCAAAGATGATGTCTCTGCAGTGAAAAAGTC 392
consensus_12967#1 CAAAGGGGC-AGACCATCAATGTTGGTG-GCAAAGATGATGTCTCTGCAGTGAAAAAGTC 808
consensus_12967#2 CAAAGGGGTTAGACTTTTTATGTTGGGGTACAAAATTATTCTCTCTTCAGAATAAAAGTT 751
******** **** * ******* * **** * * ***** *** ******
consensus_12967#0 TGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTG 897
consensus_12967#3 TGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAAACATGGAGATACCCGAGGTG 452
consensus_12967#1 TGCTTGTTGTTCATCAGCGTAGATCGAAAGGACTTGACAA-CATGGAGATACCCGAGGTG 867
consensus_12967#2 GTCTTGTGTTATTTCGCCGTTTTGCAATAGTGTTTGACCCTCTTTGGGATTCCTTAG-TG 810
***** * ** *** * * ** ***** * * * *** ** ** **
consensus_12967#0 GTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCA 957
consensus_12967#3 GTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCA 512
consensus_12967#1 GTTGATACTATGCAGTAGGACACAGGATGTTATTGCATTCATAGACCTCATCTGTATTCA 927
consensus_12967#2 GTTATTCTTATCTTATTAGACCAATTTGGTTATT-------------------------- 844
*** * *** * *** * ******
consensus_12967#0 TGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAA 1017
consensus_12967#3 TGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAA 572
consensus_12967#1 TGTGTTACTAAGTGTCTCCTTCGTTTTGCCATTTGAAACATTAATTCATTCAGGACATAA 987
consensus_12967#2 ------------------------------------------------------------
consensus_12967#0 TCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCA 1077
consensus_12967#3 TCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAG---- 628
consensus_12967#1 TCTTGCCGGTATAGTTTAGGGATATGAAATTGTGAGGCCGTCAGATTTTCATACAGGCCA 1047
consensus_12967#2 ------------------------------------------------------------
consensus_12967#0 TTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTAAAAAAAAAAAAAAAAAAAA 1137
consensus_12967#3 ------------------------------------------------------------
consensus_12967#1 TTTGTTTGCTTCTATTATGGTTTGACCGCTTGATTTATTTATATGTTGCTGTCTATTTTT 1107
consensus_12967#2 ------------------------------------------------------------
consensus_12967#0 AAAAAAAAAAAAAAAAAAAGGCCACAT 1164
consensus_12967#3 ---------------------------
consensus_12967#1 CAGTAAAAA------------------ 1116
consensus_12967#2 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||