cluster # 13071

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Oryza sativa
cluster # 13071 cluster # 13071 Sequences # 12 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13071#0 length = 1308 sequences # 12
consensusID : consensus_13071#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1308
fasta sequence
                              [TCGGTCTTCCTTCCTTCCGTCCGTCCGCGGGGCACAAACGCACCCACCACCCCCCCATAACGCGCGAGATCCCCTCTCCGCCCCCCCTCTCCCGATCCGCCCCGCCGGATCCCGCCCCGCCCCGATCCGATCCGACCTAGCCCGCCTCGCCGCCGCCGCCGTCGCCGGCCGGAGAAGGGAGGAAGGAGAAGGAGAAGGAGAAGAAGAGGAGGCACGAGATGGCCCCCGTGTCGGCGCTCGCCAAGTACAAGCTGGTGTTCCTCGGCGACCAGTCCGTCGGCAAGACCAGCATCATCACCCGCTTCATGTACGACAAGTTCGACAACACCTACCAGGCTACAATCGGTATTGACTTCCTGTCAAAGACAATGTACCTTGAAGATAGGACTGTCAGACTGCAACTTTGGGATACAGCTGGTCAGGAACGATTCAGGAGTTTGATTCCAAGCTATATCAGAGACTCTTCCGTTGCTGTCATCGTATTTGATGTTGCAAGCAGACAGTCTTCCTAAACACTTCAAAATGGATAGAGGAAGTTAGAACTGAGAGGGGCAGTGATGTTATCATTGTGCTGGTTGGGAACAAAACTGATCTTGTTGACAAGAGGCAAGTCTCCATAGAGGAAGGAGAGGGCAAAGCGAAAGATCTCGGTGTGATGTTCATTGAAACCAGTGCTAAAGCTGGTTTTAACATTAAGGCGTTGTTCCGTAAGATTGCGGCTGCACTTCCTGGAATGGAGACCCTCTCATCAGCAAAGCAGGAAGACATGGTTGATGTGAACTTGAAGTCAAGCAACGCCAACTCATCCCAGTCTCAGGCACAGGCTGGGGGATGCAGTTGTTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCA-TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTG-TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA-ACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGACCATTCAAAAAAAAAAAAAAA]

[+] EMBL AK111986             [TCGGTCTTCCTTCCTTCCGTCCGTCCGCGGGGCACAAACGCACCCACCACCCCCCCATAACGCGCGAGATCCCCTCTCCGCCCCCCCTCTCCCGATCCGCCCCGCCGGATCCCGCCCCGCCCCGATCCGATCCGACCTAGCCCGCCTCGCCGCCGCCGCCGTCGCCGGCCGGAGAAGGGAGGAAGGAGAAGGAGAAGGAGAAGAAGAGGAGGCACGAGATGGCCCCCGTGTCGGCGCTCGCCAAGTACAAGCTGGTGTTCCTCGGCGACCAGTCCGTCGGCAAGACCAGCATCATCACCCGCTTCATGTACGACAAGTTCGACAACACCTACCAGGCTACAATCGGTATTGACTTCCTGTCAAAGACAATGTACCTTGAAGATAGGACTGTCAGACTGCAACTTTGGGATACAGCTGGTCAGGAACGATTCAGGAGTTTGATTCCAAGCTATATCAGAGACTCTTCCGTTGCTGTCATCGTATTTGATGTTGCAAGCAGACAGTCTTCCTAAACACTTCAAAATGGATAGAGGAAGTTAGAACTGAGAGGGGCAGTGATGTTATCATTGTGCTGGTTGGGAACAAAACTGATCTTGTTGACAAGAGGCAAGTCTCCATAGAGGAAGGAGAGGGCAAAGCGAAAGATCTCGGTGTGATGTTCATTGAAACCAGTGCTAAAGCTGGTTTTAACATTAAGGCGTTGTTCCGTAAGATTGCGGCTGCACTTCCTGGAATGGAGACCCTCTCATCAGCAAAGCAGGAAGACATGGTTGATGTGAACTTGAAGTCAAGCAACGCCAACTCATCCCAGTCTCAGGCACAGGCTGGGGGATGCAGTTGTTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGGAATTTTT                                                                              ]
[+] EMBL AU173528             [                                 ACAAACGCACCCACCACCCCCCCATAACGCGCGAGATCCCCTCTCCGCCCCCCCTCTCCCGATCCGCCCCGCCGGATCCCGCCCCGCCCCGATCCGATCCGACCTAGCCCGCCTCGCCGCCGCCGCCGTCGCCGGCCGGAGAAGGGAGGAAGGAGAAGGAGAAGGAGAAGAAGAGGAGGCACGAGATGGCCCCCGTGTCGGNGCTCGCCAAGTACAAGCTGGTGTTCCTCGGng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA756608             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACAAAACTGATCTTGTTGACAAGAGGCAAGTCTCCATAGAGGAAGGAGAGGGCAAAGCGAAAGATCTCGGTGTGATGTTCATTGAAACCAGTGCTAAAGCTGGTTTTAACATTAAGGCGTTGTTCCGTAAGATTGCGGCTGCACTTCCTGGAATGGAAACCCTCTCATCAGCAAAGCAGGAAGACATGGTTGATGTGAACTTGAAGTCAAGCAACGCCAACTCATCCCAGTCTCAGGCACAGGCTGGGGGATGCAGTTGTTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTGTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTGNTTTTAAGTTCATNCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTANTGTTTTCTATGGTGTACC                                                                                                   ]
[+] EMBL BM419914             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAGACAT GTTGATGTGAACTTGAAGTCAAGCAAC CC ACTCATCCCAGTCTCAGGCACA GCTGGGGGATGCAGTTGTTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACC AAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCACTTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGC ACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTNTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGGAATTTTTGTAAGCTTAC ATAATCTCTACATGGC GTAGCCATATGTTATCCCGGTTGTTTTGACCATTCAAAA           ]
[+] EMBL AA751658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCAGGCNCAGGCTGGGGGATGCAGTTGTTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTNAACTTCTATCTCTTGAGTTGGGTATTTANAANTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCC                                                                                                                            ]
[-] EMBL CB966444             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGGAATTTTTGTAAGCTTAC ATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTT                            ]
[-] EMBL BU673631             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTCAGTCCCCTTACACTGACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAAGATAACGTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGG ATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTT                            ]
[+] EMBL AU173529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCCCCATGCCTCTTTCACCAAAAGCATCAGTACTGCTTGTNTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCAGTGAATCCGACCGAGTTTTCGATTCGGTCGAACGAACCA TTTGCATTGGAAAAANATAACGTTTTATGAGTTTNTACCATTTTNTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGGTTGGCNCTGTGAACTTNTATNTCTTGAGTTGGGTATTTANAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCNCAGTTAGCCTCAGTAATGTTTTNTATGGTGTACCGA ACATATATTGGAATTTTTGTAAGCTTACAATAATCTNTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGNCCNAAAAAAAAAAAAAAAAAA]
[+] EMBL CF328001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGACCATTCAAAAA          ]
[-] EMBL CF328000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAGTTAGTGATTG TTTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGACACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGACCATTCAAAAAA         ]
[+] EMBL CF330815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGA ACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGACCAaaaa              ]
[-] EMBL CF330814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTAAGTTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCTATGGTGTACCGACACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGTAGCCATATGTTATCCCGGTTGTTTTGACCA   AAAAA          ]




>consensus_13071#0
TCGGTCTTCCTTCCTTCCGTCCGTCCGCGGGGCACAAACGCACCCACCACCCCCCCATAA
CGCGCGAGATCCCCTCTCCGCCCCCCCTCTCCCGATCCGCCCCGCCGGATCCCGCCCCGC
CCCGATCCGATCCGACCTAGCCCGCCTCGCCGCCGCCGCCGTCGCCGGCCGGAGAAGGGA
GGAAGGAGAAGGAGAAGGAGAAGAAGAGGAGGCACGAGATGGCCCCCGTGTCGGCGCTCG
CCAAGTACAAGCTGGTGTTCCTCGGCGACCAGTCCGTCGGCAAGACCAGCATCATCACCC
GCTTCATGTACGACAAGTTCGACAACACCTACCAGGCTACAATCGGTATTGACTTCCTGT
CAAAGACAATGTACCTTGAAGATAGGACTGTCAGACTGCAACTTTGGGATACAGCTGGTC
AGGAACGATTCAGGAGTTTGATTCCAAGCTATATCAGAGACTCTTCCGTTGCTGTCATCG
TATTTGATGTTGCAAGCAGACAGTCTTCCTAAACACTTCAAAATGGATAGAGGAAGTTAG
AACTGAGAGGGGCAGTGATGTTATCATTGTGCTGGTTGGGAACAAAACTGATCTTGTTGA
CAAGAGGCAAGTCTCCATAGAGGAAGGAGAGGGCAAAGCGAAAGATCTCGGTGTGATGTT
CATTGAAACCAGTGCTAAAGCTGGTTTTAACATTAAGGCGTTGTTCCGTAAGATTGCGGC
TGCACTTCCTGGAATGGAGACCCTCTCATCAGCAAAGCAGGAAGACATGGTTGATGTGAA
CTTGAAGTCAAGCAACGCCAACTCATCCCAGTCTCAGGCACAGGCTGGGGGATGCAGTTG
TTAGCTTCAGTCCCCTAACACTTACTGCTTCGCGGTCTCAAGGCCCCCCATGCCTCTTTC
ACCAAAAGCATCAGTACTGCTTGTCTGAGGGGAGGAGAGTTAAATTGTCGTCTCATGCCA
GTGAATCCGACCGAGTCTTCGATTCGGTCGAACGAACCATTTGCATTGGAAAAAGATAAC
GTTTTATGAGTTTCTACCATTTTCTCAGTGGCCTAAAGCTAGCAACAGTGTATAGTTGGG
TTGGCACTGTGAACTTCTATCTCTTGAGTTGGGTATTTAGAAGTTAGTGATTGTTTTAAG
TTCATCCTCTATATATTTTCATCTCCCATCTTGTCACAGTTAGCCTCAGTAATGTTTTCT
ATGGTGTACCGAACATATATTGGAATTTTTGTAAGCTTACAATAATCTCTACATGGCAGT
AGCCATATGTTATCCCGGTTGTTTTGACCATTCAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case