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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13073#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1947 fasta sequence
[ACTCTACTTCTACTGCTGCTGCGCTTCCCTGCTTGTACCAGCCGAGGGAGAGAGAGAGAGAGAGAGAGAGAGGGGCAGCCACTCCCTCTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGTAGGGTGGGAGGGGAGTGATTCATGGA-GGGGATGGAGGAAGCAAACAGGGAGGCAGTGCAGAGCTGTCACAGGGTGCTCACCCTCCTCTCCAGCCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGATGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAAAGGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT-GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGGGTGTTAATCTCAAGTTTGACAGTTCTAATTGCACGGCATCATCCTCCCGTTCATTCTTGTCGTCTCTGAGTATGGAGGGGAGCATTGCGAGTTTGGACGGTAGCCGCTCCAGTCGTCCATTCCAGCTAGTTAGTGGGTCACAGACGTCAAGCACTCCAGAGTTAGGCCTCATGCAGAGGAGGAGGTGCACTGGTAGGGAGGATGGTAGTGGACGATGCACAACTGGGAGCCGATGTCACTGTGCGAAGAAAAGGAAGCTGAGGATAAGGAGGTCTATCAAAGTCCCTGCAATCAGTAATAAGGTTGCTGACATTCCAGCTGATGAGTTCTCATGGAGGAAGTATGGACAGAAGCCAATAAAAGGATCCCCACATCCTAGGGGTTACTATAAGTGTAGCAGTGTAAGAGGATGCCCAGCCAGGAAGCATGTTGAGAGGTGCGTCGACGACCCCTCGATGTTGATTGTTACCTATGAAGGTGATCACAATCACAACCGGGTCCTAGCTGCCCAGCCAGCCTGATCGACATTTCAGGCTTTCAGTCGCCGGATCACTTAGATAGCATCCCTTTCTAGACAAGAGATTAAAAAGTAAAAAAAAAAAGAACAAGAGGAGCCTAGTTTGTACATACTGCTCTGTTCCTAACTGTTGGGTGGTAGAGACAGCTCTTGCAGAAGAATCCATGGCGAAAGGAATTTACCGCATAGATGGAGTATTTTCTCATCGGAGACTCGTAATTTTGTAGCCTTTTCTCTCCTTTTTATTTTGCCCTCTTCATGTTGGTCCTAGAAACTATCTTGTGTTGCAGTGTGACATTCAGCTGCTGCAGTTATATGTCTGGGGGTGTGGTGGTGGTGAAGGTGATTTACTGTTTAGAGGATTGGAGAGGACAGTGCCTGTAAAAGTGGCAACACCTAGGAACAAAATGTACCCTCATCTTCAGTCTGGAATGGTAGTACAATCTTTGTTGTGATGGGAAAAATCGGGTTGTTTGTGATGTGTTTGCTAGCACAAGTGTGATCCTGCGACGGGATCGTCAGGCTTTAAAATTCTGACCGTGTTTTGTCCTGCGAAATTCAGATTTCAGAGGCCAGTTTCTGGGCGATCTGAAAACGCATGCAGCCATTGTACCTAAAAA]
[+] EMBL AK121838 [ACTCTACTTCTACTGCTGCTGCGCTTCCCTGCTTGTACCAGCCGAGGGAGAGAGAGAGAGAGAGAGAGAGAGGGGCAGCCACTCCCTCTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGTAGGGTGGGAGGGGAGTGATTCATGGA GGGGATGGAGGAAGCAAACAGGGAGGCAGTGCAGAGCTGTCACAGGGTGCTCACCCTCCTCTCCAGCCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGATGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAAAGGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGGGTGTTAATCTCAAGTTTGACAGTTCTAATTGCACGGCATCATCCTCCCGTTCATTCTTGTCGTCTCTGAGTATGGAGGGGAGCATTGCGAGTTTGGACGGTAGCCGCTCCAGTCGTCCATTCCAGCTAGTTAGTGGGTCACAGACGTCAAGCACTCCAGAGTTAGGCCTCATGCAGAGGAGGAGGTGCACTGGTAGGGAGGATGGTAGTGGACGATGCACAACTGGGAGCCGATGTCACTGTGCGAAGAAAAGGAAGCTGAGGATAAGGAGGTCTATCAAAGTCCCTGCAATCAGTAATAAGGTTGCTGACATTCCAGCTGATGAGTTCTCATGGAGGAAGTATGGACAGAAGCCAATAAAAGGATCCCCACATCCTAGGGGTTACTATAAGTGTAGCAGTGTAAGAGGATGCCCAGCCAGGAAGCATGTTGAGAGGTGCGTCGACGACCCCTCGATGTTGATTGTTACCTATGAAGGTGATCACAATCACAACCGGGTCCTAGCTGCCCAGCCAGCCTGATCGACATTTCAGGCTTTCAGTCGCCGGATCACTTCGATAGCATCCCTTTCTAGACAAGAGATTAAAAAGTAAAAAAAAAAAGAACAAGAGGAGCCTAGTTTGTACATACTGCTCTGTTCCTAACTGTTGGGTGGTAGAGACAGCTCTTGCAGAAGAATCCATGGCGAAAGGAATTTACCGCATAGATGGAGTATTTTCTCATCGGAGACTCGTAATTTTGTAGCCTTTTCTCTCCTTTTTATTTTGCCCTCTTCATGTTGGTCCTAGAAACTATCTTGTGTTGCAGTGTGACATTCAGCTGCTGCAGTTATATGTCTGGGGGTGTGGTGGTGGTGAAGGTGATTTACTGTTTAGAGGATTGGAGAGGACAGTGCCTGTAAAAGTGGCAACACCTAGGAACAAAATGTACCCTCATCTTCAGTCTGGAATGGTAGTACAATCTTTG ]
[+] EMBL CF296363 [ CTCTACTTCTACTGCTGCTGCGCTTCCCTGCTTGTACCAGCCGAGGGAGAGAGAGAGAGAGAGAGAGAGAGGGGCAGCCACTCCCTCTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGg ]
[+] EMBL CB659934 [ ACTTCTACTGCTGCTGCGCTTCCCTGCTTGTACCAGCCGAGGGAGAGAGAGAGAGAGAGAGAGAGAGGGGCAGCCACTCCCTCTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGTAGGGTGGGAGGGGAGTGATTCATGGA GGGGATGGAGGAAGCAAACAGGGAGGCAGTGCAGAGCTGTCACAGGGTGCTCACCCTCCTCTCCAGCCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGATGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAAAGGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGAGTGT ]
[+] EMBL CA755841 [ AGAGAGAGAGGGGCAGCCACTCCCTCTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGTAGGGTGGGAGGGGAGTGATTCATGGANGGGGATGGAGGAAGCAAACAGGGAGGCAGTGCAGAGCTGTCACAGGGTGCTCACCCTCCTCTCCAGCCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGATGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAAAGGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTTGGCG CCCCAGCTGGAACGCCTCACCC ]
[+] EMBL CB657556 [ CTCCTCCTCGTCGTCGTCGTCTCCACCGGTGGAGGTCTCAGCCCTGGCTCCAGCGAGGTAGGGTGGGAGGGGAGTGATTCATGGA GGGGATGGAGGAAGCAAACAGGGAGGCAGTGCAGAGCTGTCACAGGGTGCTCACCCTCCTCTCCAGCCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGATGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAAAGGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGGGTGTTAATCTCAAGTTTGACAGTTCTAATTGCACGGCATCATC ]
[+] EMBL AI978441 [ AGCTGTCACAGGGTGCTCACCCTCCTCTCCAGTCCCCATAGCCAGCTTGTCCCTAACAAGGATCTCGCGGCGGCTACGGGAGAGGCTGTTGCAAAGTTCTGCTCCGTGGCATCCAGGCTGAACAATGGCAATGGCCTCCAGGGCCATGCCCGGGTTAGAAAGATCAAGAAGCCCTTGCCTATCTTTGATAGCAACCTCTTTTTGGAGAGCCCTGCACTGGCTGTGGCGACGGCAGCCAAGACACCTAACTCGAGTCCGATCACTAGCCTCCAGCTGTTTCCGAGGTACCATCAGATGGAGGGCTCTTCTTCAAAGGATCCTGTTAGGATCCCTGCCCAATTCCCCAAnnnnnn ]
[-] EMBL CB659933 [ TTCCCCAAAAAGTTGCTTCTAGATAACCCTGCGGTTGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGAGTGTTAATCTCAAGTTTGACAGTTCTAATTGCACGGCATCATCCTCCCGTTCATTCTTGTCGTCTCTGAGTATGGAGGGGAGCATTGCGAGTTTGGACGGTAGCCGCTCCAGTCGTCCATTCCAGCTAGTTAGTGGGTCACAGACGTCAAGCACTCCAGAGTTAGGCCTCATGCAGAGGAGGAGGTGCACTGGTAGGGAGGATGGTAGTGGACGATGCACAACTGGGAGCCGATGTCACTGTGCGAAGAAAAGGAAGCTGAGGATAAGGAGGTCTATCAAAGTCCCTGCAATCAGTAATAAGGTTGCTGACATTCCAGCTGATGAGTTCTCATGGAGGAAGTATGGACAGAAGCCAATAAAAGGATCCCCACATCCTAGGGGTTACTATAAGTGTAGCAGTGTAAGAGGATGCCCAGCCAGGAAGCATGTTGAGAGGTGCGTCGACGACCCCTCGATGTTGATTGTTACCTATGAAGGTGATCACAATCACAACCGGGTCCTAGCTGCCCAGCCAGCCTGATCGACATTTCAGGCTTTCAGTCGCCGGATCACTTAGATAGCATCCCTTTCTAGACAAGAGATTAAAAAG ]
[+] EMBL CK085204 [ TGATTCGGATGGGCCATCACGGGGGCCACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGC ]
[-] EMBL CB657557 [ CACCGCTCCAGCTCATCCAGCCGGTGTCTGTT GCGCCCCCAGCTGGAACGCCTCACCCGGCATTGCCTTCGGCGCATCTTCATTTCATCCAGCAGCATCAGAGCTACCAGAGGTTTCAGCTCATGCAGCAGATGAAGATGCAGAGTGAGATGATAAAGAGGAGTGGCCTTGGTGAACAGGGTGGTAGCAATGGTGGTGGTAAGGGTGTTAATCTCAAGTTTGACAGTTCTAATTGCACGGCATCATCCTCCCGTTCATTCTTGTCGTCTCTGAGTATGGAGGGGAGCATTGCGAGTTTGGACGGTAGCCGCTCCAGTCGTCCATTCCAGCTAGTTAGTGGGTCACAGACGTCAAGCACTCCAGAGTTAGGCCTCATGCAGAGGAGGAGGTGCACTGGTAGGGAGGATGGTAGTGGACGATGCACAACTGGGAGCCGATGTCACTGTGCGAAGAAAAGGAAGCTGAGGATAAGGAGGTCTATCAAAGTCCCTGCAATCAGTAATAAGGTTGCTGACATTCCAGCTGATGAGTTCTCATGGAGGAAGTATGGACAGAAGCCAATAAAAGGATCCCCACATCCTAGGGGTTACTATAAGTGTAGCAGTGTAAGAGGATGCCCAGCCAGGAAGCATGTTGAGAGGTGCGTCGACGACCCCTCGATGTTGATTGTTACCTATGAAGGTGATCACAATCACAACCGGGTCCTAGCTGCCCAGCCAGCCTGATCGACATTTCAGGCTTTCAGTCGCCGGATCACTTAGGTAGCATCCCTTTCTAGACAAGAGATTAAAAAG ]
[+] EMBL AI978442 [ AAGAGGAGNNTAGTNNNNACATACTGCTCTGNNNNTAACTGTTGGGTGGTAGAGACAGCTCTTGCAGAAGAATCCATGGCGAAAGGAATTTACCGCATAGATGGAGTATTTTCTCATCGGAGACTCGTAATTTTGTAGCCTTTTCTCTCCTTTTTATTTTGCCCTCTTCATGTTGGTCCTAGAAACTATCTTGTGTTGCAGTGTGACATTCAGCTGCTGCAGTTATATGTCTGGGGGTGTGGTGGTGGTGAAGGTGATTTACTGTTTAGAGGATTGGAGAGGACAGTGCCTGTAAAAGTGGCAACACCTAGGAACAAAATGTACCCTCATCTTCAGTCTGGAATGGTAGTACAATCTTTGT ]
[-] EMBL CF296364 [ AGAGGAGCCTAGTTTGTACATACTGCTCTGTTCCTAACTGTTGGGTGGTAGAGACGGCTCTTGCAGAAGAATCCATGGCGAAAGGAATTTACCGCATAGATGGAGTATTTTCTCATCGGAGACTCGTAATTTTGTAGCCTTTTCTCTCCTTTTTATTTTGCCCTCTTCATGTTGGTCCTAGAAACTATCTTGTGTTGCAGTGTGACATTCAGCTGCTGCAGTTATATGTCTGGGGGTGTGGTGGTGGTGAAGGTGATTTACTGTTTAGAGGATTGGAGAGGACAGTGCCTGTAAAAGTGGCAACACCTAGGAACAAAATGTACCCTCATCTTCAGTCTGGAATGGTAGTACAATCTTTGTTGTGATGGGAAAAA ]
[+] EMBL AU165136 [ CCGCATAGATGAAGTATTTTCTCATCGGAGACTCGTAATTTTGTAGCCTTTTCTCTCCTTTTTATTTTGCCCTCTTCATGTTGGTCCTAGAAACTATCTTGTGTTGCAGTGTGACATTCAGCTGCTGCAGTTATATGTCTGGGGGTGTGGTGGTGGTGTAGGTGATTTACTGTTTAGAGGATTGGAGAGGACAGTGCCTGTAAAAGTGGCAACACCTAGGAACAAAATGTACCCTCATCTTCAGTCTGGAATGGTAGTACAATCTTTGTTGTGATGGGAAGCATCGGGTTGTTTGTGATGTGTTTGCTAGCACAAGTGTGATCCTGCGACGGGATCGTCAGGCTTTAAAATTCTGACCGTGTTTTGTCCTGCGAAATTCAGATTTCAGAGGCCAGTTTCTGGGCGATCTGAAAACGCATGCAGCCATTGTACCTAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||