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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13106#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 4348 fasta sequence
[GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGCCTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCGCCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGAGGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTTCGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTCGCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGTTGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAAAGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAATGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGGAATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGAAGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGTGGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGAGTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGCCCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAACTGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGCAACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGGGAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTATCCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGAAGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGAGGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGCATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGTCTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTCTGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGATCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATATGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCTTGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACCCGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGTTGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGGAGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAAGCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAATTGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGCGGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGATGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCTGGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCCCAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGCATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTGTCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAACCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGGTCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGGAATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTGTAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGCTGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGTTGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGCATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATTTAAAGCATGGA-TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG-TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA-AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT-CT-CTGCGAT-AATCTAAAACT-GGAT-AAATAGATGTATGAG-TTCTC-TCT-CCATTGGATC-ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC-TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT-GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT-CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACAGTTCAAAGGAAAAAATATATATAGGAAA]
[+] EMBL AK067968 [GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGCCTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCGCCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGAGGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTTCGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTCGCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGTTGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAAAGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAATGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGGAATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGAAGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGTGGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGAGTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGCCCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAACTGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGCAACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGGGAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTATCCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGAAGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGAGGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGCATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGTCTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTCTGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGATCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATATGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCTTGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACCCGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGTTGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGGAGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAAGCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAATTGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGCGGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGATGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCTGGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCCCAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGCATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTGTCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAACCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGGTCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGGAATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTGTAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGCTGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGTTGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGCATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATATATGAG TTATC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGC ]
[+] EMBL CF306798 [ GTTTCTAGAGACAAGGATAGGCAAAGATGTCATTTAAAGCATGGACTACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGAGCGTTTTTTTCACTGTCAATGATGAATCCAAAGCATATTTTCATGCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTGAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGCTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGTGAGA ]
[+] EMBL OSR10021A [ CATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGNCACCAACTGTTGATGGAGNAAANNGNAGNTNTGTCATATTTGGGCTtcttt ]
[+] EMBL AU173107 [ CATTTAAAGCATGGA TACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACGACCTGGGCG TTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGGTGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATCAATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGGTGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATGGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTG ]
[+] EMBL CB622468 [ AAGCACTATCCATTTAAGTGGTGCACCACTTGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGTTGATCGAGCAAA AGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCCTCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACCTTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGGGCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACAACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAGTGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATATAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGAAAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAGGTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAAGTGACTACCGTGACATATTAAACCTTACAAGGGT ]
[+] EMBL CA882819 [ TTATTTCACACACAGGATATGGTGGTGTTGCTTATGCATTGGCCATTACATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCACGGAACAAACAACAGAAACACACTTCATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACC ]
[+] EMBL CA766765 [ aggggGGAACAAACAGCAGAAACACACTTCATAT AACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATCGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCACATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGCTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGGTATGTAATTTGGTTATATATATGCATAT CCTTGGTCTGNCTGCTTCTTTATCAGTAACTCAAAACTGNTGNCACGTACGG ]
[+] EMBL CB096864 [ AAACATCAGCTGATATAGCTCTCAAGCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATGCAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACT TGATGATGAGACATGGTCATATCTAATAGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCAGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGTTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGGTACTAGTTTTGGTTTTTCTCCGGTTATTTTGCAATAAATGGTATGTAATTTGGTTATATATATGCATATCCCTTGg ]
[-] EMBL CB622469 [ AGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGATATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTCATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCGATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAGGCCTGAACTTGGCCAT CT CTGCGAT AATCTAAAACT GGAT AAATAGATGTATGAG TTCTC TCT CCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACAGTTCAAAGGAAAAAATATATATAGGAAA]
[+] EMBL BI809731 [ ttGCCATCCTCCTGCGATAAATCT AAACTGGGATAAAATAGATGTATGAGTTTCTCTTCTCCCATTGGATC ATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATA GGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGAC TTGTTGGCGCCCATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTT GTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTTGTTCTGTCTGCTTCTTTATCAGTAAAAAAAAAa ]
[+] EMBL BI797720 [ ATAGATGTATGAG TTCTC TCT CCATTGGATCAATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAATAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATTTTACCAGACATTGTTGGCCCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTAAATTGTAGAGGAACATA CTGAGGTTACTA TTTT TTTTTCTCC TTTATTTTCAAATAAATGTTATGTAATTTGTTTATATATATGCATAT CCTT TTCT TCTGCTTCTTaa ]
consensusID : consensus_13106#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 232 fasta sequence
[NCAGAAAGGAGTAGTTCGTNGGNCATTTTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU095442 [NCAGAAAGGAGTAGTTCGTNGGNCATTTTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTAAATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATAAATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13106#0 GCTCCCCGCATCCTCCCATCTCGCCGCGTTATCGCCTTCCGCCTCCTCCTCCGCCGCCGC 60
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CTACGCTTCTCGCCGCCGCCGCCGCCGCCTACGCTTATCTTGTTGTGCTGGTTGCATGCG 120
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CCGCGGCGCAGGGGCTGACGGAGAGGGGTGCGCGTGGAATTGAGAGGAGTGGCGGATGGA 180
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GGCGGTGGAGGAGCAGGTGGCGCCGGAGCAGGTCATCAGCACGAGGGGAGGCTCGGTGTT 240
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CGGGAAGAAGACCATCCTCAAGAGCGACCACTTCCCCGGCTGCCAGAACAAGCGCCTCTC 300
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GCCGCAAATCGACGACGCGCCCAATTATCGCCAGGCGGGTTCTTTACGAGTTCATGGTGT 360
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCAATGCCGACAATGAAGGGAATTGTAAATGTGTTAAATCACATTGGAGCACAAAAGAA 420
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AGGAAAACAAACCCAGGTTCTATGGCATAGTCTTCGCGAGGAGCCGGTTATCTACATCAA 480
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGGTCGCCCTTTTGTTCTGCGAGATGTTGAAAGGCCCTTCTCAAACCTTGAATATACGGG 540
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AATTAACCGGGAAAGAGTGGAACAGATGGAGTTTCGCCTGAAAGAAGATATTCTTCAGGA 600
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AGCTTCACGATATGGTAATAAGATCCTCGTCACTGATGAGCTGCCAAATGGTCAGATGGT 660
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GGACCAGTGGGAGTCAGTGGTAACTGATACAGTCAAGACCCCTCTTGAGGTATATGAGGA 720
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GTTGCAGCATCAAGGATACCTTGTAGATTATGAGCGTGTTCCTATTACTGATGAAAAGGC 780
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CCCAAAAGAAGGAGATTTTGACAATCTGGTACGCCGAATCTCCCAAGTTGATATAGAAAC 840
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGGAATCATATTTAATTGTCAAATGGGGAGGGGAAGGACAACCACTGGTATGGTTATAGC 900
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AACATTGATTTATCTGAACCGGATAGGATCATCAGGTATCCCTAGGACAAGTTCAATCGG 960
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GAAAGTCTTCCATTCTGGAAATGATGTAGATGACTATATGCCTAGCTCAGAAGAAGCTAT 1020
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CCTCAGAGGAGAATATTCTGTCATTAGGAGCTTGGTACGAGTTCTGGAGGGTGGTGTTGA 1080
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AGGAAAAAGGCAAGTTGACAAAGTTATTGATAAATGTGACACGATGCAGAACTTAAGAGA 1140
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GGCTATTGCTACATACCGCAATAGTATTCTTCGACAACCTGATGAGATGAAACGGGAGGC 1200
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATCACTTTCCTTCTTTGTTGAGTACTTGGAACGTTATTACTTCCTCATATGCTTTGCTGT 1260
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CTATGTTCATTCAGTGTGCTCTGCTCAACAATCAAACTTTTCAGAAGAAGTTAGTTTTTC 1320
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGATTGGATGAGAGCAAGGCCTGAACTGTACAGCATTCTTCGAAGGCTGTTGAGGAGAGA 1380
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TCCAATGGGCGCTCTTGGTTATTCAAGTTCGAAACCCTCTCTTGCAAAAATTGTTGAATA 1440
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCTGATGGACGCCCTCATGAGATGGATATTGTTGCTGCCATGAGAAATGGAGAAGTTCT 1500
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGGACGCCAAACTGTGTTAAAAAGTGACCACTGCCCAGGTTGTCACAACCTTCATTTACC 1560
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CGAAAGAGTGGAGGGTGCACCTAATTTTAGGGAAATTCCTGAATTTCCGGTTTATGGTGT 1620
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCAAACCCTACTGTTGATGGCATTCGAGCTGTTATTCAGCGTATTAGTACAAGCAAGGG 1680
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AGGGCGACCAATTCTGTGGCATAATATGAGAGAAGAACCAGTTATTTATATAAATGGGAA 1740
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GCCATTTGTACTACGTGAAGTGGAAAGACCATACAAGAATATGCTGGAGTACACGGGAAT 1800
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGATCGTGATAGGGTGGAACGAATGGAAGCTCGTTTGAAGGAGGATATTTTACGGGAAGC 1860
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GGAACGCTATAGTGGGGCCATAATGGTTATTCATGAAACTGACAATGGCGAGATATTTGA 1920
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCATGGGAAAATGTAAATAATGAAGCTGTCCTGACTCCATTGGAGGTGTACAAACTTCT 1980
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GGAGTCTGAAGGTCTTCCAATCAAGTATGCTCGAGTGCCAATCACTGATGGCAAAGCCCC 2040
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CAAAAGTTCAGATTTTGACACAATAACCTTAAATGTGGCAGCTGCTCACAAGGATACTGC 2100
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATTTGTTTTTAATTGCCAGATGGGCAGGGGAAGAACAACTACAGGTACTGTGATTGCTTG 2160
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TCTGCTGAGATTGCGAATTGATCATGGCAGACCTATTAGATTGCCAGCTTGTGAATATAA 2220
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CCATGAAGATCCAAATGAATTGGGTTACTCAAGTGGAGAAGAAACAACGGATCACAATGG 2280
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TCACCTTAATTCAAGTTCACCAAGACCTCATACTGTGACAGAACAACATCCTAGATTTGG 2340
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AATTGATGACATACTTGTTTTGCGGAAGATTACAAGATTATTTGACAACGGAATCGAGTG 2400
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TAGACAAACTTTGGATAATGTTATTGACAAATGCTCGGCTTTACAGAATATTCGCCAGGC 2460
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGTTTTGCAGTACACAAAAGTAATTAACCAACAGCATGTGGAGCAAAGAGTTAAGAGGGT 2520
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCATTAAATCGTGGTGCTGAATATTTGGAGAGGTACTTGAAATTAGTTGCATTCTCAGC 2580
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATATCTTTGGAGTGAAGCATTTGATGGTTTCTGCGGGCAAGGAGAGGCAAAGATGTCATT 2640
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TAAAGCATGGATACACCAGAGGCCAGAGATCCAAAGCATGAAATGGAGCATACGGTTACG 2700
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ACCTGGGCGTTTTTTCACTGTTAATGATGAATCCAAAGCATCTTTTCAGCCTTCACAAGG 2760
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGACGTAATGATGGAAGCCATTGTCAAAGCTCGTAATGGTTCTGTTTTGGGAAAGGGATC 2820
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AATACTCAAAATGTACTTCTTTCCTGGACAGAAAAGGTCAAGCACTATTAACTTCTGTGG 2880
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGCACCACAAGTTTTCAAGGTTGATGGATACCCTGTGTATAGCATGGCGACACCAACTGT 2940
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGATGGAGCAAAAGAAGTTCTGTCATATTTGGGCTCTAAAGATACTGGGAGAAGCATTCC 3000
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TCAAAAGGTGGTTGTCACGGATCTTAGGGAGGAAGTGGTTGTTTACATCAAGGGAACACC 3060
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TTTTGTTTTGAGAGAACTAGATCAGCCTGTTGATACTCTTAAGCATGTTGGCATAAGTGG 3120
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GCCAATGGTTGAAAACATAGAGGCAAGACTAAAGGAGGATATACTCTCCGAAGTTAAACA 3180
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ACAAGGTGGTCGGCTACTTCTGCACCAAGAAGAATTTAACTCGTCAACAGGCCAAAGTAG 3240
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TGTTGTAGGTTTTTGGGAACATATAGGTACGGAGGATGTGATGACACCGGCTGAAGTATA 3300
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TAGTGTACTGAGAAATCAGGGGTACTGTATCGACTACAAAAGAATACCTCTCACCAGGGA 3360
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 AAGAGAAGCATTAGCTTCTGATGTAGATGCAATACAATCGTCGGTTGATGAGAATGCTAG 3420
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GTACTACCTCTTTATTTCACACACAGGATATGGTGGTGTTGCTTATGCAATGGCCATTAC 3480
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATGCCTGGGACTGGGAGCAGATGAAAAGTTCATCATGGAACAAACAGCAGAAACACACTT 3540
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CATATCAACTTCTCTTACAAAAAGTGTGTCTATCAAAACATCAGCTGATATAGCTCTCAA 3600
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GCAAGGTGACTACCGTGACATATTAAACCTTACAAGGGTACTGGTACATGGCCCAAAATG 3660
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 CAAAGAAGAGGTTGACACTGTTATTGACAGGTGTGTTGGTGCTGGGCATTTGCGGGAGGA 3720
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TATTATGCATTACAGAAAGGCACTGCAAGATTGTTCACTTGATGATGATGAGACATGGTC 3780
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATATCTAATGGATATGGGCACTAAAGCTTTGAGGCGGTACTTCTTCCTGATCACCTTCCG 3840
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 ATCCTACCTCTACTGTTCATCTTTGCGTGAGCCAACATTTGCATCATGGATGGAGGCCAG 3900
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 GCCTGAACTTGGCCATCTCTGCGATAATCTAAAACTGGATAAATAGATGTATGAGTTCTC 3960
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TCTCCATTGGATCATTGAACAGCTTGCTAGTTCGTGGACTTGAGGAAGATAGGGCTGAAA 4020
consensus_13106#1 ------------------------------------------------------------
consensus_13106#0 TAATTTCTTAGGAAGGAGGAAACATAAGAACCGGCAGAAAGGAGTAGTTCGTAGGACATT 4080
consensus_13106#1 ---------------------------------NCAGAAAGGAGTAGTTCGTNGGNCATT 27
****************** ** ****
consensus_13106#0 TTACCAGACTTGTTGGCGCCAATTGGCACCAGCAAGGATGTATATATAATTCCGAGGTTA 4140
consensus_13106#1 TTACNAGACTTGTTGGCGCCAATTGGCNCCNGCAAGGATGTNTATATAATTCCGAGGTTA 87
**** ********************** ** ********** ******************
consensus_13106#0 AATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATA 4200
consensus_13106#1 AATTGTAGAGGAACATAGCTGAGGTTACTAGTTTTGTTTTTCTCCGTTTATTTTGCAATA 147
************************************************************
consensus_13106#0 AATGTTATGTAATTTGTTTATATATATGCATATCCTTGTTCTGTCTGCTTCTTTATCAGT 4260
consensus_13106#1 AATGTTATGTAATTTGTTTATATATATGCATANCCTTGTTCTGTCTAAAAAAAAAAAAAA 207
******************************** ************* * *
consensus_13106#0 AACTCAAAACTGTTGCCACATACGGATATTGTAATACGAGCTGTATTATGCAAGTGTACA 4320
consensus_13106#1 AAAAAAAAAAAAAAAAAAAAAAAAA----------------------------------- 232
** **** * * *
consensus_13106#0 GTTCAAAGGAAAAAATATATATAGGAAA 4348
consensus_13106#1 ----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||