Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13112 cluster # 13112       Sequences # 12       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13112#0 length = 2855 sequences # 8  
consensus_13112#1 length = 599 sequences # 1  
 consensus_13112#2 length = 533 sequences # 1  
consensus_13112#3 length = 270 sequences # 1  
consensus_13112#4 length = 163 sequences # 1  
consensusID : consensus_13112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2855
fasta sequence 
                              [TCATTCCCCTTCCTTCCTCCCTCTTCCGCCTCCGCCTCCTCCTCCTCCGCCCTTACCCCCGCGCGCGTGCACGCGACGGCGCGGCGATCTGATGCTGCCGCCGCTGCTGCTGCAGGCGCCGCGGTGATGGCGGCGGCGCCGTCCGCCGGCGGCGTTGGGGAGGGCTCTTCCTCCTCCGCCGCCGCCGCCGCTGCTGCTGCTGCCGCGACGATCGGGCCCCACGTGGTCGACGAAGGAGCGCTCTGTTTTGGTCATTCTCACAATGCTGATATGTTTTATAATGTGGATACGTTGTCGGTGAGGCAATGTGGCAGATGAATCTAGGAGAAGCTATGGAAGCTGGGCCATACCCAGAGCGTATTGGAGAACCAGATTGTAGTTATTACATGAGGACTGGCTTGTGCAGGTTTGGGATGACCTGTAAATTTAATCACCCAGCAGATCGTAAGATGGCTGTTGCTGCTGCAAGGATGAAGGGGGAATATCCTCAAAGAATTGGTCAACCTGAATGTCAATATTATTTGAAGACTGGAACATGCAAATTTGGAGCAACATGCAAGTTTCACCACCCCCGAGAAAAAGCTGCAATTGCAACCCGAGTACAGCTGAATGCTTTAGGCTACCCATTGCGGCCGAATGAGAAGGAATGCGCTTATTATTTAAGAACCGGACAGTGCAAATTTGGGAGCACATGTAAGTTTCATCATCCACAGCCATCTAATACGATGGTTGCTGTACGTGGCTCTGTTTATTCACCTGGACAGTCAGTTACTTCTCCTAGTCAGCATACTTACCCAGGGGCTGTAACAAACTGGCCCTTGTCAAGATCTGCTTCGTTTATTGCAAGTCCAAGGTGGCCAGGCCATTCTAGCTATGCACAAGTGATTGTTCCTCCAGGGCTCGTTCAAGTTCCAGGGTGGAATCCTTATGCAGCACAAATTGGTTCTTCATCCTCAGACGATCAACAGAGGACAGCTGGAGGTGCACAATACTATACTGGCTCACGTCACAGTGAAACACCTAACATGGGTGGCCAGGGAATGTTTTCATCATACCAAGCTGGTTCTGTTCCTCTTGGGCTATATACAGTACAGAGGGAGAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGTTCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGGAGAGAATTA-TCCCTACTCCAAACTGTG-CGTTG-AGCTCATTAGGTCTTCCACTGCGT-CCGGGAG-AGCCCATATG-CACATTCT-ATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAATTGCAAATTTG-ATCATCCAATGGGAACTGTG-ATGTATGGTCTCGC-AACATCACCAACTGGTGATGTGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCG-CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG-CACCGAGAGAGAGGCGTCCTAA-GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGC-TTGTTAGGGATGCTCT-TTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAATGGACAAAGCTTTTGCCAAACGGGGGATATGTGCAAATCGCTCTCCTCTCTGTTTCTTTCTTTTTTTTGCCTTCCCTCTAATTTAGCAGTTTCATAAGGGGCAACCCCCGCTTCTGGAATTGTGCATGTTGAGGATGCGGAAATAATAGGCAATTGTATAATCATCTACATATTTATACCCTGTCACTTGTTCCCATAAGAGAGCAGAAAATTCACCTTGATGGTGCCGGCTTTAGTTTGTCATTTCATCTTGCAAAATTTTGTTCTGCTACTGAACCTTTTATCAATTGTGCATCATTTTTTTGCCATTATATGTGCACGGGAAGGATGGTTACTAAAGAACAAGTAACAAGAGGTAGGGTTAGACTGGTTGAGACAGGTCCGGTTCCTAATTCTGTTACAGCAATCTATCATTTGCACAGCTATCAAGGTTGCCAAACACCTCTATCCGGTGTTACGCCTCCTAAATCCTGATGAACGGAGCAGCTGCGTCAACACCTATGTCCTGATAAACGGAGCAGCTGCATCAGGATTCTGGAGTGTCAGGTAGGTGAAGGTATAATGTGGAGCAAAAGGAGTTCCAGATGACTCCTAATCCTATAATCATCCGATACGAGTAGGTTCGCCACATGCGGATGAAATGTAGTGGATGGTTTCTAAACTACAAATGTAGTGGATGGTTTCTTATAAATAGGATTATCAGATCATCAGCCCTTCAAAACTATGGGCCTGGTTGGCACAGCTCTAGCTCCCGCTCCACCCCTCCTGGAGCTGGAGCTCAGCCAAACAGTTTTAGCTCCACCAAAAATGGGAGTGGAGTTGGGTAGAGCTCTCTCACAGAATGTACTGGAGTTGTAGAGCTGGGTTTAGGCAGCTCCACAACTCCACTTCAGACTCAACTCCTAAAGTTATATTTAGGAGTTAGAGTTGTACTAAACAGGCCTTACAAATAGAACACTACTTATATGTCCACATTATAAGTTTGCCTAAGAGGG]

[+] EMBL AK110345             [TCATTCCCCTTCCTTCCTCCCTCTTCCGCCTCCGCCTCCTCCTCCTCCGCCCTTACCCCCGCGCGCGTGCACGCGACGGCGCGGCGATCTGATGCTGCCGCCGCTGCTGCTGCAGGCGCCGCGGTGATGGCGGCGGCGCCGTCCGCCGGCGGCGTTGGGGAGGGCTCTTCCTCCTCCGCCGCCGCCGCCGCTGCTGCTGCTGCCGCGACGATCGGGCCCCACGTGGTCGACGAAGGAGCGCTCTGTTTTGGTCATTCTCACAATGCTGATATGTTTTATAATGTGGATACGTTGTCGGTGAGGCAATGTGGCAGATGAATCTAGGAGAAGCTATGGAAGCTGGGCCATACCCAGAGCGTATTGGAGAACCAGATTGTAGTTATTACATGAGGACTGGCTTGTGCAGGTTTGGGATGACCTGTAAATTTAATCACCCAGCAGATCGTAAGATGGCTGTTGCTGCTGCAAGGATGAAGGGGGAATATCCTCAAAGAATTGGTCAACCTGAATGTCAATATTATTTGAAGACTGGAACATGCAAATTTGGAGCAACATGCAAGTTTCACCACCCCCGAGAAAAAGCTGCAATTGCAACCCGAGTACAGCTGAATGCTTTAGGCTACCCATTGCGGCCGAATGAGAAGGAATGCGCTTATTATTTAAGAACCGGACAGTGCAAATTTGGGAGCACATGTAAGTTTCATCATCCACAGCCATCTAATACGATGGTTGCTGTACGTGGCTCTGTTTATTCACCTGGACAGTCAGTTACTTCTCCTAGTCAGCATACTTACCCAGGGGCTGTAACAAACTGGCCCTTGTCAAGATCTGCTTCGTTTATTGCAAGTCCAAGGTGGCCAGGCCATTCTAGCTATGCACAAGTGATTGTTCCTCCAGGGCTCGTTCAAGTTCCAGGGTGGAATCCTTATGCAGCACAAATTGGTTCTTCATCCTCAGACGATCAACAGAGGACAGCTGGAGGTGCACAATACTATACTGGCTCACGTCACAGTGAAACACCTAACATGGGTGGCCAGGGAATGTTTTCATCATACCAAGCTGGTTCTGTTCCTCTTGGGCTATATACAGTACAGAGGG GAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGTTCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGGAGAGAATTA TCCCTACTCCAAACTGTG CGTTG AGCTCATTAGGTCTTCCACTGCGT CCGGGAG AGCCCATATG CACATTCT ATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAATTGCAAATTTG ATCATCCAATGGGAACTGTG ATGTATGGTCTCGC AACATCACCAACTGGTGATGTGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCG CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG CACCGAGAGAGAGGCGTCCTAA GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGC TTGTTAGGGATGCTCT TTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAATGGACAAAGCTTTTGCCAAACGGGGGATATGTGCAAATCGCTCTCCTCTCTGTTTCTTTCTTTTTTTTGCCTTCCCTCTAATTTAGCAGTTTCATAAGGGGCAACCCCCGCTTCTGGAATTGTGCATGTTGAGGATGCGGAAATAATAGGCAATTGTATAATCATCTACATATTTATACCCTGTCACTTGTTCCCATAAGAGAGCAGAAAATTCACCTTGATGGTGCCGGCTTTAGTTTGTCATTTCATCTTGCAAAATTTTGTTCTGCTACTGAACCTTTTATCAATTGTGCATCATTTTTTTGCCATTATATGTGCACGGGAAGGATGGTTACTAAAGAACAAGTAACAAGAGGTAGGGTTAGACTGGTTGAGACAGGTCCGGTTCCTAATTCTGTTACAGCAATCTATCATTTGCACAGCTATCAAGGTTGCCAAACACCTCTATCCGGTGTTACGCCTCCTAAATCCTGATGAACGGAGCAGCTGCGTCAACACCTATGTCCTGATAAACGGAGCAGCTGCATCAGGATTCTGGAGTGTCAGGTAGGTGAAGGTATAATGTGGAGCAAAAGGAGTTCCAGATGACTCCTAATCCTATAATCATCCGATACGAGTAGGTTCGCCACATGCGGATGAAATGTAGTGGATGGTTTCTAAACTACAAATGTAGTGGATGGTTTCTTATAAATAGGATTATCAGATCATCAGCCCTTCAAAACTATGGGCCTGGTTGGCACAGCTCTAGCTCCCGCTCCACCCCTCCTGGAGCTGGAGCTCAGCCAAACAGTTTTAGCTCCACCAAAAATGGGAGTGGAGTTGGGTAGAGCTCTCTCACAGAATGTACTGGAGTTGTAGAGCTGGGTTTAGGCAGCTCCACAACTCCACTTCAGACTCAACTCCTAAAGTTATATTTAGGAGTTAGAGTTGTACTAAACAGGCCTTACAAATAGAACACTACTTATATGTCCACATTATAAGTTTGCCTAAGAGGG]
[+] EMBL CF324237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCCATCTAATACGATGGTTGCTGTACGTGGCTCTGTTTATTCACCTGGACAGTCAGTTACTTCTCCTAGTCAGCATACTTACCCAGGGGCTGTAACAAACTGGCCCTTGTCAAGATCTGCTTCGTTTATTGCAAGTCCAAGGTGGCCAGGCCATTCTAGCTATGCACAAGTGATTGTTCCTCCAGGGCTCGTTCAAGTTCCAGGGTGGAATCCTTATGCAGCACAAATTGGTTCTTCATCCTCAGACGATCAACAGAGGACAGCTGGAGGTGCACAATACTATACTGGCTCACGTCACAGTGAAACACCTAACATGGGTGACCAGGGAATGTTTTCATCATACCAAGCTGGGTCTGTTCCTCTTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK112047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTTCATCATACCAAGCTGGTTCTGTTCCTCTTGGGCTATATACAGTACAGAGGGAGAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGTTCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGGAGAGAATTA TCCCTACTCCAAACTGTG CGTTG AGCTCATTAGGTCTTCCACTGCGT CCGGGAG AGCCCATATG CACATTCT ATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAATTGCAAATTTG ATCATCCAATGGGAACTGTG ATGTATGGTCTCGC AACATCACCAACTGGTGATGTGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCG CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG CACCGAGAGAGAGGCGTCCTAA GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGC TTGTTAGGGATGCTCT TTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAATGGACAAAGCTTTTGCCAAACGGGGGATATGTGCAAATCGCTCTCCTCTCTGTTTCTTTCTTTTTTTTGCCTTCCCTCTAATTTAGCAGTTTCATAAGGGGCAACCCCCGCTTCTGGAATTGTGCATGTTGAGGATGCGGAAATAATAGGCAATTGTATAATCATCTACATATTTATACCCTGTCACTTGTTCCCATAAGAGAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BE228899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cggcacgagTGGTTCTGTTCCTCTTGGGCTATATACAGTACAGAGGGAGAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGTTCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGGAGAGAATTA TCCCTACTCCNAACTGTG CGTTG AGCTCATTAGGTCTTCCACTGCGT CCGGGAG AGCCCATATG CACATTCT ATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAATTGCAAATTTG ATCATCCNATGGGAACTGTG ATGTNTGGTCTCGC GACATCACCNACTGGTGATGTNTCTGCCCNACGTNTGCTGGCNCCTGTACCAGCACATTCAGAAGTNTCGCCCTGACAATTTCCCAGGGAGGTCCCGGAGGNTCACCCTTCCCAATTCCCCCCAAATACCCCCTGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AA751468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccangnGAGAANTANTCCCAATACCAAACTGTGACGTTGAAGCTCCATAGGTNTTCCACTGCGTNCCGGGAGAANCCCTTATGNCACA TCTAATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAA TNNAAATTTGAATCATCCAATGGGAACTGTGAATGTATGGTCTCGCGAACATCACCAACTGGTGATGTGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCG CCTGACAATGTCTCAGGGNGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGGNCACCGNGAGAGAGGCGTCCTAAGGCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB096337             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAGTTTGGTCCGAATTGCAAATTTG ATCATCCAATGGGAACTGTG ATGTATGGTCTCGC GACATCACCAACTGGTGATGTGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCG CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG CACCGAGAGAGAGGCGTCCTAA GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACCTTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGC TTGTTAGGGATGCTCT TTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAATGGACAAAGCTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI805588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGTATCG CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG CACCGAGAGAGAGGCGTCCTAA GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAAC AAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGC TTGTTAGGGATGCTCT TTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAAC AACTCACCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAATGGACCAAGCTTTTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OS0754A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CG CCTGACAATGTCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAAGAGG CACCGAGAGAGAGGCGTCCTAA GCCATCCTCGGTGCAAATGTTTCATGCTGCTTCCTGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAGGTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCAACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGCTTTGTTAGGGATGCTCTNTTTGCCCCGTGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_13112#0
TCATTCCCCTTCCTTCCTCCCTCTTCCGCCTCCGCCTCCTCCTCCTCCGCCCTTACCCCC
GCGCGCGTGCACGCGACGGCGCGGCGATCTGATGCTGCCGCCGCTGCTGCTGCAGGCGCC
GCGGTGATGGCGGCGGCGCCGTCCGCCGGCGGCGTTGGGGAGGGCTCTTCCTCCTCCGCC
GCCGCCGCCGCTGCTGCTGCTGCCGCGACGATCGGGCCCCACGTGGTCGACGAAGGAGCG
CTCTGTTTTGGTCATTCTCACAATGCTGATATGTTTTATAATGTGGATACGTTGTCGGTG
AGGCAATGTGGCAGATGAATCTAGGAGAAGCTATGGAAGCTGGGCCATACCCAGAGCGTA
TTGGAGAACCAGATTGTAGTTATTACATGAGGACTGGCTTGTGCAGGTTTGGGATGACCT
GTAAATTTAATCACCCAGCAGATCGTAAGATGGCTGTTGCTGCTGCAAGGATGAAGGGGG
AATATCCTCAAAGAATTGGTCAACCTGAATGTCAATATTATTTGAAGACTGGAACATGCA
AATTTGGAGCAACATGCAAGTTTCACCACCCCCGAGAAAAAGCTGCAATTGCAACCCGAG
TACAGCTGAATGCTTTAGGCTACCCATTGCGGCCGAATGAGAAGGAATGCGCTTATTATT
TAAGAACCGGACAGTGCAAATTTGGGAGCACATGTAAGTTTCATCATCCACAGCCATCTA
ATACGATGGTTGCTGTACGTGGCTCTGTTTATTCACCTGGACAGTCAGTTACTTCTCCTA
GTCAGCATACTTACCCAGGGGCTGTAACAAACTGGCCCTTGTCAAGATCTGCTTCGTTTA
TTGCAAGTCCAAGGTGGCCAGGCCATTCTAGCTATGCACAAGTGATTGTTCCTCCAGGGC
TCGTTCAAGTTCCAGGGTGGAATCCTTATGCAGCACAAATTGGTTCTTCATCCTCAGACG
ATCAACAGAGGACAGCTGGAGGTGCACAATACTATACTGGCTCACGTCACAGTGAAACAC
CTAACATGGGTGGCCAGGGAATGTTTTCATCATACCAAGCTGGTTCTGTTCCTCTTGGGC
TATATACAGTACAGAGGGAGAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGT
TCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGG
AGAGAATTATCCCTACTCCAAACTGTGCGTTGAGCTCATTAGGTCTTCCACTGCGTCCGG
GAGAGCCCATATGCACATTCTATTCTCGCTATGGCATCTGCAAGTTTGGTCCGAATTGCA
AATTTGATCATCCAATGGGAACTGTGATGTATGGTCTCGCAACATCACCAACTGGTGATG
TGTCTGCCCGACGTATGCTGGCACCTGTACCAGCACATTCAGAAGTATCGCCTGACAATG
TCTCAGGGAGGTCTCGGAGGATCACCCATTCAGATTCCCAGCAAATACCCTCTGGTGAAA
GAGGCACCGAGAGAGAGGCGTCCTAAGCCATCCTCGGTGCAAATGTTTCATGCTGCTTCC
TGTTCTTGACTCTCTGAGTAAATTACCCGCAACAAAACTTGAGGAGCCGAAGCTGTACAG
GTCTCGCCCTTTTGCCTCACATTTGAGCTTTACATACCGGAGCTTGCTTCAAGACTTCCA
ACATGTATCGCATTCAGGCAGGAAAAAGTTCTTGCTTGTTAGGGATGCTCTTTTGCCCCG
TGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGA
CATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAA
TGGACAAAGCTTTTGCCAAACGGGGGATATGTGCAAATCGCTCTCCTCTCTGTTTCTTTC
TTTTTTTTGCCTTCCCTCTAATTTAGCAGTTTCATAAGGGGCAACCCCCGCTTCTGGAAT
TGTGCATGTTGAGGATGCGGAAATAATAGGCAATTGTATAATCATCTACATATTTATACC
CTGTCACTTGTTCCCATAAGAGAGCAGAAAATTCACCTTGATGGTGCCGGCTTTAGTTTG
TCATTTCATCTTGCAAAATTTTGTTCTGCTACTGAACCTTTTATCAATTGTGCATCATTT
TTTTGCCATTATATGTGCACGGGAAGGATGGTTACTAAAGAACAAGTAACAAGAGGTAGG
GTTAGACTGGTTGAGACAGGTCCGGTTCCTAATTCTGTTACAGCAATCTATCATTTGCAC
AGCTATCAAGGTTGCCAAACACCTCTATCCGGTGTTACGCCTCCTAAATCCTGATGAACG
GAGCAGCTGCGTCAACACCTATGTCCTGATAAACGGAGCAGCTGCATCAGGATTCTGGAG
TGTCAGGTAGGTGAAGGTATAATGTGGAGCAAAAGGAGTTCCAGATGACTCCTAATCCTA
TAATCATCCGATACGAGTAGGTTCGCCACATGCGGATGAAATGTAGTGGATGGTTTCTAA
ACTACAAATGTAGTGGATGGTTTCTTATAAATAGGATTATCAGATCATCAGCCCTTCAAA
ACTATGGGCCTGGTTGGCACAGCTCTAGCTCCCGCTCCACCCCTCCTGGAGCTGGAGCTC
AGCCAAACAGTTTTAGCTCCACCAAAAATGGGAGTGGAGTTGGGTAGAGCTCTCTCACAG
AATGTACTGGAGTTGTAGAGCTGGGTTTAGGCAGCTCCACAACTCCACTTCAGACTCAAC
TCCTAAAGTTATATTTAGGAGTTAGAGTTGTACTAAACAGGCCTTACAAATAGAACACTA
CTTATATGTCCACATTATAAGTTTGCCTAAGAGGG

consensusID : consensus_13112#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence 
                              [GCCTGCTAGGTACCGTGTCCGGAAGTTGCCCGGGTCGACCCACGCGTCCGGGTCCGAATTTGCAAATTTGATCANTCCAATGGGAACTGTGATGTATGGTCTCGCGACAGTCACCAACTTGTGTGATGTGTCTGTCCCGACGTATGCTGGCACCTGTACCAGCACAGTTCAGAAGTATTCGCCGTGACAATGTTCTCAGGGAGGTCTCGGAGGATCACCCAGTGTCAGAGTTCCCAGCAAAGTATCCGCGTCTGGTGAATAGAGGCACCCGAGAGAGAGGCGGTCCTAAGCCAGTCCTCGGTGCAAATGTTTGTCAGTGCGTGCGTGTCCGTGGTTCGTTGACGTCGTCGTGAGNTAAAGTNTACCCGCAACANAAACGTTGAGGAGCCGAAGCGTGGTACAGGTCTCGCCCGTTTTGCCTCACCGTGTGTGAGCGTTGTACATACCGGAGCTTGCTTCAAGACGTTCCACAGTGTAGTCGCATTCAGGCCAGGAAAAAGNTTCGTGCTTGTTAGGGATGCTCTTTTGCCCCGTGTAAACGGGACAACCGACCTTANTTAAACATCTATATATGGAACAACTCACCTCTGGACAAAAAA]

[+] EMBL BQ908594             [GCCTGCTAGGTACCGTGTCCGGAAGTTGCCCGGGTCGACCCACGCGTCCGGGTCCGAATTTGCAAATTTGATCANTCCAATGGGAACTGTGATGTATGGTCTCGCGACAGTCACCAACTTGTGTGATGTGTCTGTCCCGACGTATGCTGGCACCTGTACCAGCACAGTTCAGAAGTATTCGCCGTGACAATGTTCTCAGGGAGGTCTCGGAGGATCACCCAGTGTCAGAGTTCCCAGCAAAGTATCCGCGTCTGGTGAATAGAGGCACCCGAGAGAGAGGCGGTCCTAAGCCAGTCCTCGGTGCAAATGTTTGTCAGTGCGTGCGTGTCCGTGGTTCGTTGACGTCGTCGTGAGNTAAAGTNTACCCGCAACANAAACGTTGAGGAGCCGAAGCGTGGTACAGGTCTCGCCCGTTTTGCCTCACCGTGTGTGAGCGTTGTACATACCGGAGCTTGCTTCAAGACGTTCCACAGTGTAGTCGCATTCAGGCCAGGAAAAAGNTTCGTGCTTGTTAGGGATGCTCTTTTGCCCCGTGTAAACGGGACAACCGACCTTANTTAAACATCTATATATGGAACAACTCACCTCTGGACAAAAAA]




>consensus_13112#1
GCCTGCTAGGTACCGTGTCCGGAAGTTGCCCGGGTCGACCCACGCGTCCGGGTCCGAATT
TGCAAATTTGATCANTCCAATGGGAACTGTGATGTATGGTCTCGCGACAGTCACCAACTT
GTGTGATGTGTCTGTCCCGACGTATGCTGGCACCTGTACCAGCACAGTTCAGAAGTATTC
GCCGTGACAATGTTCTCAGGGAGGTCTCGGAGGATCACCCAGTGTCAGAGTTCCCAGCAA
AGTATCCGCGTCTGGTGAATAGAGGCACCCGAGAGAGAGGCGGTCCTAAGCCAGTCCTCG
GTGCAAATGTTTGTCAGTGCGTGCGTGTCCGTGGTTCGTTGACGTCGTCGTGAGNTAAAG
TNTACCCGCAACANAAACGTTGAGGAGCCGAAGCGTGGTACAGGTCTCGCCCGTTTTGCC
TCACCGTGTGTGAGCGTTGTACATACCGGAGCTTGCTTCAAGACGTTCCACAGTGTAGTC
GCATTCAGGCCAGGAAAAAGNTTCGTGCTTGTTAGGGATGCTCTTTTGCCCCGTGTAAAC
GGGACAACCGACCTTANTTAAACATCTATATATGGAACAACTCACCTCTGGACAAAAAA

consensusID : consensus_13112#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 533
fasta sequence 
                              [ATTTACAATACCAGGAGCTTGCTTCAAAGACTTCCACAACATGTATCGCATTCAGCCAAGGAAAAAGTTCTTGCTTTGTTAGGGATCGCTCTTGTTGCCACCAGTGTAAACAGGGACAAACCGACCTTAATNTTAAACAATCTATAATGATGGACACACAACTCAACCTCTGGGACAATTCAGATTTCGAGTGATGTCCGCCTTGGATGCCCATTTGGTGTGTAAGTTATAACAGGTCNCCTTGGCAAATGGACAAAGCTTTTGCCACAACTGGGGGATAATGTCGCAAAATGCAGCTGCTCCTCTGCTGTTGTGCTTTCTGGTGTTGTTGTTGCCTGGCCACTGCTAATTTACGCAAGTTTCATAAAGGGCCAAACACCCCAGCTTCCTGGGAATTGTCGCATGTTGGAGGATCGCAGGAAATAAATAGCAATTGTATAATCATCTACATATTTATACCCTGTCACATTGTTCCCATAAGAGACCAGAAAATTCACCTTGGTGGTCCCGNCTTTAGTTTGTCAAAAAAAAAA]

[+] EMBL BM421821             [ATTTACAATACCAGGAGCTTGCTTCAAAGACTTCCACAACATGTATCGCATTCAGCCAAGGAAAAAGTTCTTGCTTTGTTAGGGATCGCTCTTGTTGCCACCAGTGTAAACAGGGACAAACCGACCTTAATNTTAAACAATCTATAATGATGGACACACAACTCAACCTCTGGGACAATTCAGATTTCGAGTGATGTCCGCCTTGGATGCCCATTTGGTGTGTAAGTTATAACAGGTCNCCTTGGCAAATGGACAAAGCTTTTGCCACAACTGGGGGATAATGTCGCAAAATGCAGCTGCTCCTCTGCTGTTGTGCTTTCTGGTGTTGTTGTTGCCTGGCCACTGCTAATTTACGCAAGTTTCATAAAGGGCCAAACACCCCAGCTTCCTGGGAATTGTCGCATGTTGGAGGATCGCAGGAAATAAATAGCAATTGTATAATCATCTACATATTTATACCCTGTCACATTGTTCCCATAAGAGACCAGAAAATTCACCTTGGTGGTCCCGNCTTTAGTTTGTCAAAAAAAAAA]




>consensus_13112#2
ATTTACAATACCAGGAGCTTGCTTCAAAGACTTCCACAACATGTATCGCATTCAGCCAAG
GAAAAAGTTCTTGCTTTGTTAGGGATCGCTCTTGTTGCCACCAGTGTAAACAGGGACAAA
CCGACCTTAATNTTAAACAATCTATAATGATGGACACACAACTCAACCTCTGGGACAATT
CAGATTTCGAGTGATGTCCGCCTTGGATGCCCATTTGGTGTGTAAGTTATAACAGGTCNC
CTTGGCAAATGGACAAAGCTTTTGCCACAACTGGGGGATAATGTCGCAAAATGCAGCTGC
TCCTCTGCTGTTGTGCTTTCTGGTGTTGTTGTTGCCTGGCCACTGCTAATTTACGCAAGT
TTCATAAAGGGCCAAACACCCCAGCTTCCTGGGAATTGTCGCATGTTGGAGGATCGCAGG
AAATAAATAGCAATTGTATAATCATCTACATATTTATACCCTGTCACATTGTTCCCATAA
GAGACCAGAAAATTCACCTTGGTGGTCCCGNCTTTAGTTTGTCAAAAAAAAAA

consensusID : consensus_13112#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence 
                              [ATTCAGGCNGGAAAAAGTTCTTGCTTGTTAGGGATGCTCTTTTGCCCCGTNTAAACGGGNCAACCGACCTTNTTTAAACATCTATATATGGAACAAACTCNCCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTNCAATGGACAAAGCTTTTGCCNAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANANNAAAAAAANAAAAA]

[+] EMBL AU162163             [ATTCAGGCNGGAAAAAGTTCTTGCTTGTTAGGGATGCTCTTTTGCCCCGTNTAAACGGGNCAACCGACCTTNTTTAAACATCTATATATGGAACAAACTCNCCTCTGGACATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTNCAATGGACAAAGCTTTTGCCNAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANANNAAAAAAANAAAAA]




>consensus_13112#3
ATTCAGGCNGGAAAAAGTTCTTGCTTGTTAGGGATGCTCTTTTGCCCCGTNTAAACGGGN
CAACCGACCTTNTTTAAACATCTATATATGGAACAAACTCNCCTCTGGACATTCGATTTC
GAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTNCAATGGACAAAGCT
TTTGCCNAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAANANNAAAAAAANAAAAA

consensusID : consensus_13112#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 163
fasta sequence 
                              [CCACTGCGCTGGGAGAGCCCATATGTATATTCTATTCCTCGCTATGGCATCTGCAAGTTTGGTCGAATTGCAAATTTGATCATCCAATGGGAACTGTGATGTATGGTCTCGCAACATCACCAACTGGTGATGTGCTGCCGACTGCATGCTGGCACTGTACAGC]

[+] EMBL AA749843             [CCACTGCGCTGGGAGAGCCCATATGTATATTCTATTCCTCGCTATGGCATCTGCAAGTTTGGTCGAATTGCAAATTTGATCATCCAATGGGAACTGTGATGTATGGTCTCGCAACATCACCAACTGGTGATGTGCTGCCGACTGCATGCTGGCACTGTACAGC]




>consensus_13112#4
CCACTGCGCTGGGAGAGCCCATATGTATATTCTATTCCTCGCTATGGCATCTGCAAGTTT
GGTCGAATTGCAAATTTGATCATCCAATGGGAACTGTGATGTATGGTCTCGCAACATCAC
CAACTGGTGATGTGCTGCCGACTGCATGCTGGCACTGTACAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TCATTCCCCTTCCTTCCTCCCTCTTCCGCCTCCGCCTCCTCCTCCTCCGCCCTTACCCCC 60
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GCGCGCGTGCACGCGACGGCGCGGCGATCTGATGCTGCCGCCGCTGCTGCTGCAGGCGCC 120
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GCGGTGATGGCGGCGGCGCCGTCCGCCGGCGGCGTTGGGGAGGGCTCTTCCTCCTCCGCC 180
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GCCGCCGCCGCTGCTGCTGCTGCCGCGACGATCGGGCCCCACGTGGTCGACGAAGGAGCG 240
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      CTCTGTTTTGGTCATTCTCACAATGCTGATATGTTTTATAATGTGGATACGTTGTCGGTG 300
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AGGCAATGTGGCAGATGAATCTAGGAGAAGCTATGGAAGCTGGGCCATACCCAGAGCGTA 360
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TTGGAGAACCAGATTGTAGTTATTACATGAGGACTGGCTTGTGCAGGTTTGGGATGACCT 420
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GTAAATTTAATCACCCAGCAGATCGTAAGATGGCTGTTGCTGCTGCAAGGATGAAGGGGG 480
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AATATCCTCAAAGAATTGGTCAACCTGAATGTCAATATTATTTGAAGACTGGAACATGCA 540
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AATTTGGAGCAACATGCAAGTTTCACCACCCCCGAGAAAAAGCTGCAATTGCAACCCGAG 600
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TACAGCTGAATGCTTTAGGCTACCCATTGCGGCCGAATGAGAAGGAATGCGCTTATTATT 660
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TAAGAACCGGACAGTGCAAATTTGGGAGCACATGTAAGTTTCATCATCCACAGCCATCTA 720
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      ATACGATGGTTGCTGTACGTGGCTCTGTTTATTCACCTGGACAGTCAGTTACTTCTCCTA 780
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GTCAGCATACTTACCCAGGGGCTGTAACAAACTGGCCCTTGTCAAGATCTGCTTCGTTTA 840
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TTGCAAGTCCAAGGTGGCCAGGCCATTCTAGCTATGCACAAGTGATTGTTCCTCCAGGGC 900
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TCGTTCAAGTTCCAGGGTGGAATCCTTATGCAGCACAAATTGGTTCTTCATCCTCAGACG 960
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      ATCAACAGAGGACAGCTGGAGGTGCACAATACTATACTGGCTCACGTCACAGTGAAACAC 1020
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      CTAACATGGGTGGCCAGGGAATGTTTTCATCATACCAAGCTGGTTCTGTTCCTCTTGGGC 1080
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TATATACAGTACAGAGGGAGAGCATATTTCCAGAGCGACCTGACCAACCAGAATGCCAGT 1140
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TCTATATGAAGACTGGGGACTGTAAGTTTGGTGCTGTATGCAAGTTCCATCATCCCAAGG 1200
consensus_13112#2      ----------------------------------------------------------AT 2
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ----------------------------------------------------GC--CTGC 6
consensus_13112#4      -----------------------------------------------CCACTGCG-CTGG 12
consensus_13112#0      AGAGAATTATCCCTACTCCAAACTGTGCGTTGAGCTCATTAGGTCTTCCACTGCGTCCGG 1260
consensus_13112#2      TTACAATACCAGGAGCTTGCTTCAAAGACTTCCACAACATGTATCGCATTCAGCCAAGGA 62
consensus_13112#3      -----------------------------------------------ATTCAGGCN-GGA 12
                                                                           *     * 

consensus_13112#1      TAGGTACCGTGTCC-GGAA---GTTGCCCGGGTCGACCC--ACGCGTCCGGGTCCGAATT 60
consensus_13112#4      GAGAGCCCATATGT-ATATTCTATTCCTCGCTATGGCAT--CTGCAAGTTTGGTCGAATT 69
consensus_13112#0      GAGAGCCCATATGC-ACATTCTATT-CTCGCTATGGCAT--CTGCAAGTTTGGTCCGAAT 1316
consensus_13112#2      AAAAGTTCTTGCTTTGTTAGGGATCGCTCTTGTTGCCACCAGTGTAAACAGGGACAAACC 122
consensus_13112#3      AAAAGTTCTTGCTT-GTTAGGGAT-GCTCTT-TTGCCCC--GTNTAAACGGGNC--AACC 65
                        *     * *             *  * *     * *              *     *  

consensus_13112#1      TGCA---AATTTGATCANTCCAATG----GGAACTGTGATGTATGGTCTCGCGACAGTCA 113
consensus_13112#4      -GCA---AATTTGATCAT-CCAATG----GGAACTGTGATGTATGGTCTCGCAACA-TCA 119
consensus_13112#0      TGCA---AATTTGATCAT-CCAATG----GGAACTGTGATGTATGGTCTCGCAACA-TCA 1367
consensus_13112#2      GACCTTAATNTTAAACAATCTATAATGATGGACACACAACTCAACCTCTGGGACAATTCA 182
consensus_13112#3      GACCTT--NTTTAAACA-TCTATAT--ATGGA---ACAAACTCNCCTCTGGA--CATTC- 114
                         *       ** * **  * *       ***      *       *** *    * ** 

consensus_13112#1      CCAACTTGTGTGATGTGTCTGTCCCGACGTATGCTGGCACCTGTACCAGCACAGTTCAGA 173
consensus_13112#4      CCAACTGGTG--ATGTG-CTG-CCGACTGCATGCTGGCAC-TGTAC-AGC---------- 163
consensus_13112#0      CCAACTGGTG--ATGTGTCTG-CCCGACGTATGCTGGCACCTGTACCAGCACA-TTCAGA 1423
consensus_13112#2      -GATTTCGAGTGATGTCCGCCTTGGATGCCCATTTGGTGTGTAAGTTATAACAGGTCNCC 241
consensus_13112#3      -GATTTCGAGTGATGT--GCCTTGA---TCCCTTTGTTGT---AGTTATA-CAGGTGCCT 164
                         *  * * *  ****                  **           *            

consensus_13112#1      AGTATTCGCCGTGACAATGTTCTCAGGGAGGTCTCGGAGGATCACCCAGTGTCAGAGTTC 233
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AGTATC--GCCTGACAATGT-CTCAGGGAGGTCTCGGAGGATCACCCA---TTCAGATTC 1477
consensus_13112#2      TTGGCAAATGGACAAAGCTTTTGCCACAACTGGGGGATAATGTCGCAAAATGCAGCTGCT 301
consensus_13112#3      TNC---AATGGACAAAGCTTTTGCCNAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAA 221
                                                                                   

consensus_13112#1      CCAGCAAAGTATCCGCGTCTGGTGAATAGAGGCACCCGAGAGAGAGGCGGTCCTAAGCCA 293
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      CCAGCAAA----TACCCTCTGGTGAA-AGAGGCACC-GAGAGAGAGGCG-TCCTAAGCCA 1530
consensus_13112#2      CCTCTGCTGTTGTGCTTTCTGGTGTTGTTGTTGCCTGGCCACTGCTAATTTACGCAAGTT 361
consensus_13112#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANANNAAAAAAANAAAAA----------- 270
                                                                                   

consensus_13112#1      GTCCTCGGTGCAAATGTTTGTCAGTGCGTGCGTGTCCGTGGTTCGTTGACGTCGTCGTGA 353
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      -TCCTCGGTGCAAATGTTTCATGCTGC-TTCCTGTTCTTGACTCTCTGA----------- 1577
consensus_13112#2      TCATAAAGGGCCAAACACCCCAGCTTCCTGGGAATTGTCGCATGTTGGAGGATCGCAGGA 421
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      GNTAAAGTNTACCCGCAACANAAACGTTGAGGAGCCGAAGCGTGGTACAGGTCTCGCCCG 413
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      ---GTAAATTACCCGCAACAAAAC--TTGAGGAGCCGAAGC--TGTACAGGTCTCGCCC- 1629
consensus_13112#2      AATAAATAGCAATTGTATAATCAT--CTACATATTTATACCCTGTCACATTGTTCCCATA 479
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      TTTTGCCTCACCGTGTGTGAGCGTTGTACATACCGGAGCTTGCTTCAAGACGTTCCACAG 473
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TTTTGCCTCAC-----ATTTGAGCTTTACATACCGGAGCTTGCTTCAAGAC-TTCCAACA 1683
consensus_13112#2      AGAGACCAGAAAATTCACCTTGGTGGTCCCGNCTTTAGTTTGTCAAAAAAAAAA------ 533
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      TGTAGTCGCATTCAGGCCAGGAAAAAGNTTCGTGCTTGTTAGGGATGCTCTTTTGCCCCG 533
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TGTA-TCGCATTCAGGC--AGGAAAAAGTTCTTGCTTGTTAGGGATGCTCTTTTGCCCCG 1740
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      TGTAAACGGGACAACCGACCTTANTTAAACATCTATATATGGAACAA-CTCACCTCTGGA 592
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TGTAAACGGGACAACCGACCTTATTTAAACATCTATATATGGAACAAACTCACCTCTGGA 1800
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      CAAAAAA----------------------------------------------------- 599
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      CATTCGATTTCGAGTGATGTGCCTTGATCCCTTTGTTGTAGTTATACAGGTGCCTTGCAA 1860
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TGGACAAAGCTTTTGCCAAACGGGGGATATGTGCAAATCGCTCTCCTCTCTGTTTCTTTC 1920
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TTTTTTTTGCCTTCCCTCTAATTTAGCAGTTTCATAAGGGGCAACCCCCGCTTCTGGAAT 1980
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TGTGCATGTTGAGGATGCGGAAATAATAGGCAATTGTATAATCATCTACATATTTATACC 2040
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      CTGTCACTTGTTCCCATAAGAGAGCAGAAAATTCACCTTGATGGTGCCGGCTTTAGTTTG 2100
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TCATTTCATCTTGCAAAATTTTGTTCTGCTACTGAACCTTTTATCAATTGTGCATCATTT 2160
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TTTTGCCATTATATGTGCACGGGAAGGATGGTTACTAAAGAACAAGTAACAAGAGGTAGG 2220
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GTTAGACTGGTTGAGACAGGTCCGGTTCCTAATTCTGTTACAGCAATCTATCATTTGCAC 2280
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AGCTATCAAGGTTGCCAAACACCTCTATCCGGTGTTACGCCTCCTAAATCCTGATGAACG 2340
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      GAGCAGCTGCGTCAACACCTATGTCCTGATAAACGGAGCAGCTGCATCAGGATTCTGGAG 2400
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TGTCAGGTAGGTGAAGGTATAATGTGGAGCAAAAGGAGTTCCAGATGACTCCTAATCCTA 2460
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TAATCATCCGATACGAGTAGGTTCGCCACATGCGGATGAAATGTAGTGGATGGTTTCTAA 2520
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      ACTACAAATGTAGTGGATGGTTTCTTATAAATAGGATTATCAGATCATCAGCCCTTCAAA 2580
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      ACTATGGGCCTGGTTGGCACAGCTCTAGCTCCCGCTCCACCCCTCCTGGAGCTGGAGCTC 2640
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AGCCAAACAGTTTTAGCTCCACCAAAAATGGGAGTGGAGTTGGGTAGAGCTCTCTCACAG 2700
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      AATGTACTGGAGTTGTAGAGCTGGGTTTAGGCAGCTCCACAACTCCACTTCAGACTCAAC 2760
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      ------------------------------------------------------------
consensus_13112#4      ------------------------------------------------------------
consensus_13112#0      TCCTAAAGTTATATTTAGGAGTTAGAGTTGTACTAAACAGGCCTTACAAATAGAACACTA 2820
consensus_13112#2      ------------------------------------------------------------
consensus_13112#3      ------------------------------------------------------------
                                                                                   

consensus_13112#1      -----------------------------------
consensus_13112#4      -----------------------------------
consensus_13112#0      CTTATATGTCCACATTATAAGTTTGCCTAAGAGGG 2855
consensus_13112#2      -----------------------------------
consensus_13112#3      -----------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)