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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1651 fasta sequence
[CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAAACTACTTAAAAGGA]
[+] EMBL AK099720 [CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCGTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAgttcta ]
[+] EMBL CB655552 [ CTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAGGACTTGCTGCCTCAACGAAAGAAAGCGTATAGAATCACTTGGCGGCTATGTTGATG ]
[+] EMBL CB654058 [ CCTCCCCCTTA TAAACTCGGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGTCGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATTACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAGTGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAGCTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTGAGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGTGCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAAGGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCGCAATTGAAATGTCCAAGGACCACAG ]
[+] EMBL CB640257 [ GGTTTTTTTAGATATTCCCAAGAATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCCGTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAGCTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCACCGGCATGTGCGTGGAGGAACTCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAGACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTCGATTACAAGCAGGCTATGCCGAGCAGCTGTGCCCCAGTTATCCGATCAAGGGACTGGTCGGATATCGGAGGTCGCGATCACATGGAAGATGCTCATGTCTGC ]
[-] EMBL CB655553 [ AATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGGGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAGTACCGGGATTGTTAGTGTGATTAAAAAAAAAACTTAAAAGGA]
[+] EMBL BI797855 [ TTGTGCTGCAACCAGATCGTCGAGGAGGCCATAAGGCGA GGGCCTCAGACAACCTAAC GCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAATGATATCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAAA ]
[+] EMBL BI795688 [ GAATAAAACC ACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAAA ]
consensusID : consensus_13142#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 796 fasta sequence
[TTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCC-ACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCC-AATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCC-AATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAATTAAAAGG]
[-] EMBL CB654059 [TTTGAATGGTCAATTAGCAGTCACTAGAGCATTGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCGCGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGCTCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGCGAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCC ACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCC AATGATAGCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTGCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCC AATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTAGGGGTGTGATTAAAAGTTCTATCGTGTGATGAATCCTTAAAAGG]
[+] EMBL BI795411 [ GGTGAT GTCTCATTCCAACCAGGAGGCCCCTCCTCAGCTCAGAGTGAACAGGACGGGGA GGTCGAGCGGAGCATATC GCTGAAGGGCTTCACAGCCTCAGGGTGCTCCTGGAAGGCCAAATGATATCTCCACTGCTATCATCAGCCTTGAAGTTGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGT CAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCATTGTCGACATTCCAGTGTGTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAAaaa ]
[+] EMBL BI797292 [ TGAGATCTCACCTTGCGTTGTGAGGCCCAGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGGGGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGGATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAAAAA ]
consensusID : consensus_13142#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 468 fasta sequence
[ANTCGNNANGCTTGTNNGGGGCGCGANAGGGCGTGNNACCGGANTTGAAATGTNCAGGGCCCAGGACTTGCTGCCTAACGAAAGAAAGCGTNTAGAATNACTTGGCGGNTCTGTTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGCTATAGCATTGGGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGCGGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCTCGAACCAGANTGCCGTGGATTTCANCANGAAGAGGCTNCAAGANCACACTGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATACAACCTAACGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC]
[+] EMBL CA765038 [ANTCGNNANGCTTGTNNGGGGCGCGANAGGGCGTGNNACCGGANTTGAAATGTNCAGGGCCCAGGACTTGCTGCCTAACGAAAGAAAGCGTNTAGAATNACTTGGCGGNTCTGTTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGCTATAGCATTGGGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGCGGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCTCGAACCAGANTGCCGTGGATTTCANCANGAAGAGGCTNCAAGANCACACTGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATACAACCTAACGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC]
consensusID : consensus_13142#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[CGAGAGCATAAGCGAGGGCCTCAGCAACTAACGCGTGATGTCTCATCCACCAGGAGCCCCTCCTCAGCTCAGATGACAGGACGGGGAGGTCGAGCGGACATATCGCTGAAGGCTTCACAGCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTATCATCACCTTGAAGTTGTCAGAATTGAAGAGAAACCTTATCTTGATGTTGTCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCAGACATCCATTTTGAGAATAAACCACGACGGAGATCTCACCCATGAGCCAGCATGTAATAATTGGAATATAGTAAGGATTGATATCACAGGGGCTTGAGGCTCATTACGAGTATTCCCGGTCATCGGTAAAAAAAATACCGGGATGTTAGGTGATAAATTCTATCGGGAGAATAAAAAAAAAA]
[+] EMBL BI797639 [CGAGAGCATAAGCGAGGGCCTCAGCAACTAACGCGTGATGTCTCATCCACCAGGAGCCCCTCCTCAGCTCAGATGACAGGACGGGGAGGTCGAGCGGACATATCGCTGAAGGCTTCACAGCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTATCATCACCTTGAAGTTGTCAGAATTGAAGAGAAACCTTATCTTGATGTTGTCAGAATTGAAGAGCAACTGTATTTAGTGATTTTCGGCATCTTGCTGTTTACCCCCAAATCCAGACATCCATTTTGAGAATAAACCACGACGGAGATCTCACCCATGAGCCAGCATGTAATAATTGGAATATAGTAAGGATTGATATCACAGGGGCTTGAGGCTCATTACGAGTATTCCCGGTCATCGGTAAAAAAAATACCGGGATGTTAGGTGATAAATTCTATCGGGAGAATAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CGCCTTCGCTTAATAATCTCCTCCTCCGTATTAAACTCGGTTTTTTTAGATATTCCCAAG 60
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 AATCTCTCCTCTCCTTTCCATTGTTGCTCCGCTCGGATTCCGCTCTTCTTCTTCTTCTCC 120
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 GTCTCCGATTCGGTCTCCTCCTCCTCTGCTCCGACCAGGATTCTGCAGCGGCAGCGGCAG 180
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CTGCTGCGGTTGGTTTTTCAGGCTCGGTGGCGGCAGGCAGCGGCATGTGCGTGGAGGAAC 240
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 TCGAAGGCGCAGAGAGGCTCGATTTTGGTGGGGTTGCGGAGCTCGAGACAACACCGGCAG 300
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 ACTTCGAGATGGAGAAAGTTTGTGAGAACACAGTATCTCTTGATTTCAAGCAGGCTAGGT 360
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CGAGCAGTTTTGTCCCAGTTATCCGATCAGGGGACTGGTCGGATATTGGAGGTCGCGATT 420
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 ACATGGAAGATGCTCATGTCTGCATCTCAGATCTAGCTAATAATTTTGGTCATAATTCAG 480
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 TGGATGATGAGATTATTTCCTTTTATGGGGTCTTTGATGGGCATGGTGGAAAAGATGCAG 540
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CTCATTATGTGCGTGATAACTTGCCACGGGTTATCGTGGAAGATGCTGATTTTCCTCTTG 600
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 AGCTAGAGAAAGTTGTCAGGAGGTCATTTGTGCAAACTGATAGTCAATTTGCAGAGAGGT 660
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 GCTCTCATCAGAATGCACTTTCTTCTGGAACGACAGCGCTTACAGCAATGATTTTTGGAA 720
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 GGTCTCTTCTGGTTGCTAATGCTGGTGATTGCCGAGCAGTTCTTTCAAGGCGTGGTACCG 780
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ------------------------------------------------------------
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CAATTGAAATGTCCAAGGACCACAGGACTTACTGCCTCAACGAAAGAAAGCGTATAGAAT 840
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 ----------------------------TTTGAATGGTCAATTAGCAGTCACTAGAGCAT 32
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CACTTGGCGGCTATGTTGATGATGGCTATTTGAATGGTCAATTAGCAGTCACTAGAGCAT 900
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 TGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCG 92
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 TGGGTGACTGGCATCTCGAGGGTCTGAAAGAAGTGGGTGAGCCAGGTGGCCCCTTGAGCG 960
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 CGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAA 152
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 CGGAACCAGAGCTCAAGATGATCACACTGACGAAGGAAGACGAGTTCTTGATAATAGGAA 1020
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 GCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGC 212
consensus_13142#3 ------------------------------------------------------------
consensus_13142#0 GCGACGGCATCTGGGACTTCTTCTCGAACCAGAATGCCGTGGATTTCACCAGGAAGAGGC 1080
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 TCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGC 272
consensus_13142#3 ----------------------------------------------CGAGAGCATAAG-C 13
consensus_13142#0 TCCAAGAGCACAATGACTTGAGGTTGTGCTGCAAGCAGATCGTCGAGGAGGCAATAAGGC 1140
consensus_13142#2 ------------------------------------------------------------
consensus_13142#1 GAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTC 332
consensus_13142#3 GAGGG-CCTCAG-CAAC-TAACGC--GTGATG-TCTCAT-CCACCAGGAG-CCCCTCCTC 65
consensus_13142#0 GAGGGGCCTCAGACAACCTAACGGCGGTGATGGTCTCATTCCACCAGGAGGCCCCTCCTC 1200
consensus_13142#2 -------------ANTCGNNANGCTTGTNNGGGGCGCGA-----NAGGGCGTGNNACCGG 42
* * * ** * * * *** **
consensus_13142#1 AGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACA 392
consensus_13142#3 AGCTCAGAT--GACAGGACGGGGAGG-TCGAGCGGA-CATATCG-CTGAAGG-CTTCACA 119
consensus_13142#0 AGCTCAGAGTGAACAGGACGGGGAGGGTCGAGCGGAGCATATCGGCTGAAGGGCTTCACA 1260
consensus_13142#2 ANTTGAAATGTNCAGGGCCCAGGA----CTTGCTG--CCTAACGAAAGAAAGCGTNTAGA 96
* * * * ** * *** * ** * * ** ** *** * * * *
consensus_13142#1 GCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTA-TCATCAGCCTTGAAGT 451
consensus_13142#3 GCCTCCAGGTGCTCCTGGAAGCCCAATGATATCTCCACTGCTA-TCATCA-CCTTGAAGT 177
consensus_13142#0 GCCTCAGGGTGCTCCTGGAAGGCCAATGATAGCTCCACTGCTA-TCATCAGCCTTGAAGT 1319
consensus_13142#2 ATNACTTGGCGGNTCTG-----TTGNTGATGGCTTTTTGGATGGTNATTAGCAAGACAGC 151
* ** * *** **** ** * * * ** * * **
consensus_13142#1 TGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTG-CAGAATTGAA-GAGCAACTGT 509
consensus_13142#3 TGT-CAGAATTGAAGAGAAACCTTATCTTGATGTTGT--CAGAATTGAA-GAGCAACTGT 233
consensus_13142#0 TGTGCAGAATTGAAGAGAAACCTTATCTTGATGTTGTG-CAGAATTGAA-GAGCAACTGT 1377
consensus_13142#2 TAT--AGCATTG--GGTGACTGNNATCTCGAGGGTCTGACANANNTGGGTGAGCCAGGGC 207
* * ** **** * * **** ** * * * ** * ** **** * *
consensus_13142#1 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGT 568
consensus_13142#3 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAAATC----CAGACATCC------ 282
consensus_13142#0 ATTTAGTGATTTTCGGCATCTT-GCTGTTTACCCCCAATCCATTGTCGACATTCCAGTGT 1436
consensus_13142#2 GGCCCCTTGNGCGCGGANCCANANCTCANGATGATCACACTGACGAAGGAAGACGAG--- 264
* *** * ** * ** * * *
consensus_13142#1 GTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCC 628
consensus_13142#3 -----ATTTTG--AGAATAAACC--ACGA--CGGAGATCTCACCC------ATGAGCC-- 323
consensus_13142#0 GTGTTATTGTGTGAGAATAAAACCAACGAACCTGAGATCTCACCTTGCATTGTGAGGCCC 1496
consensus_13142#2 -----TTCTTGATAATAGGAAGNGACGGCNTCTGGGACTTCTTCT-------CGAACC-- 310
* ** * * ** * * * ** ** * ** *
consensus_13142#1 AGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGG 688
consensus_13142#3 -AGCAT-GTAAT--AATTGGAATATAGTAAG----------GATTGATAT-----CACAG 364
consensus_13142#0 AGGCATTGTAAATAAGTTGGGAGATAGTAGGTAAGGAGTGTGAGTAGTGTGCATCCAGGG 1556
consensus_13142#2 -AGANT-GCCGT-GGATTTCANCANGAAGAGG---------CTNCAAGAN-----CACAC 353
* * * ** * * **
consensus_13142#1 GGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGG 748
consensus_13142#3 GGGCTTGAGGCTCATTACGAG---TATTCCCG-GTCATCGGTAAAAAAA---ATACCGGG 417
consensus_13142#0 GGCTTTGAGGCTCATTATGCGATGTATTCCCCTGTCATCTGTAAAAAAATAAATACCGGG 1616
consensus_13142#2 TGACTTGANGTTGAGCTGCAAGCAGATCGTCNAGGNGGCNATAAGGCGANGGNCCTTATA 413
* **** * * * ** * * * *** *
consensus_13142#1 ATTGTTAGTGTGATTAAAAGTTCTATCGTGTGATGAATAATTAAAAGG--------- 796
consensus_13142#3 AT-GTTAG-GTGAT---AAATTCTATCGGGAGAATAAAAAAAAAA------------ 457
consensus_13142#0 ATTGTTAGTGTGATTAAAAAAACTACTTAAAAGGA---------------------- 1651
consensus_13142#2 CAACCTAA--CGGCAGGNGATGNTCTTATTCCACCANNGAGGCCGCCTTCTCAGCTC 468
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||