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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13151#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1838 fasta sequence
[GCCTCGGAGCAGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGTGAGTGACAGCGGCTCGTGTTCGGTTCAGGTCGTGTACCTTTGGCGGCGCCGGTGAAGCAAAGCTAAAATGGGTTTTGATGTCGCAGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTACACACGCTGCTCTGCTCCTCCTTAATTGCAGACTTATCTGATCTGATCCCCCCAAATTTCGCTGCTCCTGGTTTGGAGCAATGATTGTTGCTTGCTTATGTGCTTCAAATGCTATGAGAGGGAGGTTTATTCCTTTTTTATTTATTTAGTTATTATTAGTTATTTATTACCATTGTGGAGGGGCATATACTGATATGTTATCCTCCTGGGCCACCTGCTCTCGATGCAAATAGAGAGAAAATATATTGCTAGTCGTAGGCCACTTTTCTGTAGCTAATTACATCACTGATGATGCGCGAGATGTGCTAAAAGATTCCATCTTGTTTGGCTCTTCCGGTGACCCCCCTTGAATTCAGCGCTGCAAAAACATGCGCTTTGCATTAAACAACCGCATGTGATCCCGACGAGGGAATCAAATCACGCGATGATAGCAAAGCTCTAAATCAAAATGAAGTCATCTGAAATAGCCAAACAATTTTTTTTTTTTGACAAAATGAAACATGAACTTGGGCACTGATCCGCTCTGAATTCTGTGCTACGCAGGTGGTCCGCAATTGCCGCCAGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACCTCAAGAAGCGCCTCGATGCGCCGGCTCAGGGCGGTCATGTCGCGGCGAGCGGCGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAAGAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTCGCCCGAGCGGTCCGCCTCGTCGTCGGTGACGGAGT-CCTC-GATGGCCTCGTC--GGTGG-CGG-AGG-AG-CACGGCAACGCCGGGATCAG-CTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCA-TGGAG-CCCGGCGACGCGTTCGTCGCGCCGCCATCCG-CCG-ACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCA-CCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCA-GGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTC-TTTTTTTACCTCCTTCCTGTATGTATAGA-AACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCAACTTGCACGCTAAAAAAAAAA]
[+] EMBL AK111798 [GCCTCGGAGCAGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGTGAGTGACAGCGGCTCGTGTTCGGTTCAGGTCGTGTACCTTTGGCGGCGCCGGTGAAGCAAAGCTAAAATGGGTTTTGATGTCGCAGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTACACACGCTGCTCTGCTCCTCCTTAATTGCAGACTTATCTGATCTGATCCCCCCAAATTTCGCTGCTCCTGGTTTGGAGCAATGATTGTTGCTTGCTTATGTGCTTCAAATGCTATGAGAGGGAGGTTTATTCCTTTTTTATTTATTTAGTTATTATTAGTTATTTATTACCATTGTGGAGGGGCATATACTGATATGTTATCCTCCTGGGCCACCTGCTCTCGATGCAAATAGAGAGAAAATATATTGCTAGTCGTAGGCCACTTTTCTGTAGCTAATTACATCACTGATGATGCGCGAGATGTGCTAAAAGATTCCATCTTGTTTGGCTCTTCCGGTGACCCCCCTTGAATTCAGCGCTGCAAAAACATGCGCTTTGCATTAAACAACCGCATGTGATCCCGACGAGGGAATCAAATCACGCGATGATAGCAAAGCTCTAAATCAAAATGAAGTCATCTGAAATAGCCAAACAATTTTTTTTTTTTGACAAAATGAAACATGAACTTGGGCACTGATCCGCTCTGAATTCTGTGCTACGCAGGTGGTCCGCAATTGCCGCCAGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACCTCAAGAAGCGCCTCGATGCGCCGGCTCAGGGCGGTCATGTCGCGGCGAGCGGCGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAAGAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTCGCCCGAGCGGTCCGCCTCGTCGTCGGTGACGGAGT CCTC GATGGCCTCGTC GGTGG CGG AGG AG CACGGCAACGCCGGGATCAG CTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCA TGGAG CCCGGCGACGCGTTCGTCGCGCCGCCATCCG CCG ACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCA CCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCA GGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTC TTTTTTTACCTCCTTCCTGTATGTATAGA AACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCA ]
[+] EMBL BI805305 [ AGTCCCTCGGATGGCCTCGTCCGGGTGGCCGGAAGGTAGCCACGGCAACGCCGGGATCAGTCTCGGCGTCCGCGTCCGTGTGCGCCGAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCA TGGAG CCC GCGACGCGTTCGTCGCGCCGCCATCCG CCG ACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCA CCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCA GGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTC TTTTTTTACCTCCTTCCTGTATGTATAGA AACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCAACTTGCACGCTAAAAAAAAAA]
[+] EMBL BM420650 [ AGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCACTGGAGCCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCCGTACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCC CAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCACCCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCACGGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTC TTTTTTTACCTCCTTCCTGTATGTATAGACCACAGAAGAGATCAGTGATCGAAAaaaaaaa ]
[+] EMBL AU082312 [ GTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGNTACGACGTGTCCA TGGAG CCCGGCGACGCGTTCNTCGCGCCGCNATCCG CCG ACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCA CCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCA GGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTC TTTTTTTACCTCCTTCCTGTATGTATAGA AACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAAaaa ]
[+] EMBL BM421359 [ GGAAACGCTGTCGATCCCGCTGGACGGGTACGACGTGTCCA TGGAG CCCGGCGACGCGTTCGTCGCGCCGCCATCCG CCG ACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCNCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCT CCGCCATCTTGCA CCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCA GGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTCTTTTTTTTACCTCCTTCCTGTATGTATAGA AACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAAaaa ]
consensusID : consensus_13151#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1193 fasta sequence
[CGAGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCGCC-AGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACC-TCAAGAAGCGCCTCGATGCGCC-GGCTCAGGGCGGTCATGTCGCGGCGAGCGG-CGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAAGAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTTGCCCGAGCGGTCCGCCTCGTCGTCGGTGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAGCTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCACCGGAGGGACATAGCTACCAGACAAGAGTGTCCATGAGCGAATCATCAAGCAGGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTCTTTTTTTACCTCCTTCCTGTATGTATAGAAACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCAACTTGCACGCTAAAAAAA]
[+] EMBL AY323484 [CGAGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCGCC AGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACC TCAAGAAGCGCCTCGATGCGCC GGCTCAGGGCGGTCATGTCGCGGCGAGCGG CGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAAGAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTTGCCCGAGCGGTCCGCCTCGTCGTCGGTGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAGCTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCACCGGAGGGACATAGCTACCAGACAAGAGTGTCCATGAGCGAATCATCAAGCAGGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTCTTTTTTTACCTCCTTCCTGTATGTATAGAAACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCAACTTGCACGCTAA ]
[+] EMBL BP432988 [ AGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCG C AGGTTGCCCGGGAGGACGGACAACGAGATCAAG ]
[+] EMBL CA756857 [ GCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGTTGCGTTGCGGTAAGAGCTGCCGGC ]
[+] EMBL AF467733 [ CCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCGCC AGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACC TCAAGAAGCGCCTCGATGCGCC GGCTCAGGGCGGTCATGTCGCGGCGAGCGG CGGCAAGAAGCACAAGAAGCCGAAGA CGCGAAGAAGCCAGCCGCCGCCGCCGCCGGGCCG CGGGGTTG CCGAGCGGTCCG CTCGTCGTCGGTGACGGAGTCCTCGATGGCCTCGTC GTGGCGGAGGA CACGGCAACGCCGGGATCA CTCGGCGTCC CGT CGTGTGCG CAAGGAGGA AACT CTT ACCTCGGCTT CGAGGA ]
[+] EMBL OSMYB1202 [ CCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCGCC AGGTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGCACACCCACC TCAAGAAGCGCCTCGATGCGCC GGCTCAGGGCGGTCATGTCGCGGCGAGCGG CGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAAGAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTCGCCCGAGCGGTCCGCCTCGTCGTCGGTGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAGCTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCATCTTGCACCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCAGGAAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAATTTTCTTTTTTTACCTCCTTCCTGTATGTATAGAAACAGAAGAGATCAGTGATCGAAACCTGAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCATTTGATTAATTAAATTCAACTTGCACGCTAAAAAAA]
[+] EMBL C72644 [ AGGAGCAGAGCAGTTCAGATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGCCACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCGGCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCACGAGCTGCTTGGCAACAGGTGGTCCGCAATTGCCGCCAAGTTTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTTGCACACCCACCTTCAAGAAGCGCCTCGATGCGCCGGGCTCAGGGCGNNATTTTTTTGGCGAACGGCCGGCAAG ]
[+] EMBL CB000724 [ TGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAGCTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGAGTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGACGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTACTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAAGACAGAGAATTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13151#0 GCCTCGGAGCAGCCGCCTCCCTTCCAAGAACACACAACGCAAGAGGAGCAGAGCAGTTCA 60
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 GATCAGAGCAGGGAAGGAGCAAGCACAATGGGGAGGGCTCCGTGCTGCGAGAAGATGGGG 120
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 CTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTCGCCCACATCCAGCGC 180
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 CACGGCCACGGCAACTGGCGCGCCCTGCCCAAGCAAGCCGGTGAGTGACAGCGGCTCGTG 240
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 TTCGGTTCAGGTCGTGTACCTTTGGCGGCGCCGGTGAAGCAAAGCTAAAATGGGTTTTGA 300
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 TGTCGCAGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGGTGGATCAACTACCTGCG 360
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 GCCGGACATCAAGCGGGGCAACTTCTCCAAGGAGGAGGAGGACACCATCATCCATCTCCA 420
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 CGAGCTGCTTGGCAACAGGTACACACGCTGCTCTGCTCCTCCTTAATTGCAGACTTATCT 480
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 GATCTGATCCCCCCAAATTTCGCTGCTCCTGGTTTGGAGCAATGATTGTTGCTTGCTTAT 540
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 GTGCTTCAAATGCTATGAGAGGGAGGTTTATTCCTTTTTTATTTATTTAGTTATTATTAG 600
consensus_13151#1 ------------------------------------------------------------
consensus_13151#0 TTATTTATTACCATTGTGGAGGGGCATATACTGATATGTTATCCTCCTGGGCCACCTGCT 660
consensus_13151#1 CGAGCCGCCTCCCTTCC--AAGAACACACAACGCAAGAGGAGC-----AGAGCAGTTCAG 53
* ** ** * * ** * * * * * * * ** *
consensus_13151#0 CTCGATGCAAATAGAGAGAAAATATATTGCTAGTCGTAGGCCACTTTTCTGTAGCTAATT 720
consensus_13151#1 ATCAGAGCAGGGAAGGAGCAAGCACAATGG-----GGAGGGCTCCGTGCTGCGAGAA--- 105
** *** * *** ** * * ** * *** * * * *** *
consensus_13151#0 ACATCACTGATGATGCGCGAGATGTGCTAAAAGATTCCATCTTGTTTGGCTCTTCCGGTG 780
consensus_13151#1 --------GATGGGGCTCAAGAAGGGTCCATGGACGCCGGAGGAGGACAAGGTCCTCGTC 157
**** ** * *** * * * ** ** * * **
consensus_13151#0 ACCCCCCTTGAATTCAGCGCTGCAAAAACATGCGCTTTGCATTAAACAACCGCATGTGAT 840
consensus_13151#1 GCCCAC-----ATCCAGCGCCACGGCCACG-GCAACTGGCGC--GCCCTGCCCAAGCAAG 209
*** * ** ****** * ** ** * ** * * ** * *
consensus_13151#0 CCCGACGAGGGAATCAAATCACGCGATGATAGCAAAGCTCTAAATCAAAATGAAGTCATC 900
consensus_13151#1 CCGGGCTGCTGCGTTGCGGCAAGAGCTGCCGGCTCCGG--TGGATCAACTACCTGCGGCC 267
** * * * * ** * * ** ** * * ***** * *
consensus_13151#0 TGAAATAGCCAAACAATTTTTTTTTTTTGACAAAATGAAACATGAACTTGGGCACTGATC 960
consensus_13151#1 GGACAT---CAAGCGGGGCAACTTCTCCAAGGAGGAGGA----GGACACCATCATCCATC 320
** ** *** * ** * * * * * * ** ** ***
consensus_13151#0 CGCTCTGAATTCTGTGCTACGCAGGTGGTCCGCAATTGCCGCCAGGTTGCCCGGGAGGAC 1020
consensus_13151#1 TCCACGAGCTGCTTGGCAA--CAGGTGGTCCGCAATTGCCGCCAGGTTGCCCGGGAGGAC 378
* * * ** ** * ***************************************
consensus_13151#0 GGACAACGAGATCAAGAACGTGTGGCACACCCACCTCAAGAAGCGCCTCGATGCGCCGGC 1080
consensus_13151#1 GGACAACGAGATCAAGAACGTGTGGCACACCCACCTCAAGAAGCGCCTCGATGCGCCGGC 438
************************************************************
consensus_13151#0 TCAGGGCGGTCATGTCGCGGCGAGCGGCGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAA 1140
consensus_13151#1 TCAGGGCGGTCATGTCGCGGCGAGCGGCGGCAAGAAGCACAAGAAGCCGAAGAGCGCGAA 498
************************************************************
consensus_13151#0 GAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTCGCCCGAGCGGTCCGCCTCGTCGTC 1200
consensus_13151#1 GAAGCCAGCCGCCGCCGCCGCCGCGCCGCCGGCGTTGCCCGAGCGGTCCGCCTCGTCGTC 558
*********************************** ************************
consensus_13151#0 GGTGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAG 1260
consensus_13151#1 GGTGACGGAGTCCTCGATGGCCTCGTCGGTGGCGGAGGAGCACGGCAACGCCGGGATCAG 618
************************************************************
consensus_13151#0 CTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGA 1320
consensus_13151#1 CTCGGCGTCCGCGTCCGTGTGCGCCAAGGAGGAGAGCTCCTTCACCTCGGCTTCCGAGGA 678
************************************************************
consensus_13151#0 GTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGA 1380
consensus_13151#1 GTTCCAGATCGACGACAGCTTCTGGTCGGAGACGCTGTCGATGCCGCTGGACGGGTACGA 738
************************************************************
consensus_13151#0 CGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTA 1440
consensus_13151#1 CGTGTCCATGGAGCCCGGCGACGCGTTCGTCGCGCCGCCATCCGCCGACGACATGGACTA 798
************************************************************
consensus_13151#0 CTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAA 1500
consensus_13151#1 CTGGCTCGGAGTGTTCATGGAGTCCGGCGAAGCGCAAGACTTGCCGCAGATCTAGAGAAA 858
************************************************************
consensus_13151#0 GAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCAT 1560
consensus_13151#1 GAGAGAGAATTTTACCGTTTCTTCGGTTAATTGATTTGTTTTTTCTCTCTCTGCCGCCAT 918
************************************************************
consensus_13151#0 CTTGCACCGGAGGGACATAGCTAACAGACAAGAGTGTCCATGAGCGAATCATCAAGCAGG 1620
consensus_13151#1 CTTGCACCGGAGGGACATAGCTACCAGACAAGAGTGTCCATGAGCGAATCATCAAGCAGG 978
*********************** ************************************
consensus_13151#0 AAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAAT 1680
consensus_13151#1 AAGAACGCGAATCATGCGATGCGATGCGATGAGATGCACCCAGTAGCTTTGATAGTTAAT 1038
************************************************************
consensus_13151#0 TTTCTTTTTTTACCTCCTTCCTGTATGTATAGAAACAGAAGAGATCAGTGATCGAAACCT 1740
consensus_13151#1 TTTCTTTTTTTACCTCCTTCCTGTATGTATAGAAACAGAAGAGATCAGTGATCGAAACCT 1098
************************************************************
consensus_13151#0 GAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCAT 1800
consensus_13151#1 GAGATCCTTTCTCACAATGTGCAAACTGGATCATCAGAAAACGGGCTCTGCGTTTCTCAT 1158
************************************************************
consensus_13151#0 TTGATTAATTAAATTCAACTTGCACGCTAAAAAAAAAA 1838
consensus_13151#1 TTGATTAATTAAATTCAACTTGCACGCTAAAAAAA--- 1193
***********************************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||