cluster # 13172

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Oryza sativa
cluster # 13172 cluster # 13172 Sequences # 12 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13172#0 length = 552 sequences # 8
consensus_13172#1 length = 425 sequences # 1

consensus_13172#2 length = 424 sequences # 1
consensus_13172#3 length = 331 sequences # 1
consensus_13172#4 length = 220 sequences # 1

consensusID : consensus_13172#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 552
fasta sequence

                              [CCGCCTCCGCCTCCCCCNCCGCGCTCTCTGCCGCGGTCTCGGCGTCGCTGACCTTCACCTCTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT-CCCGGATTCTG-CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC-AAATTCAAGTTAGCCTTTTTGCTTGTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU088672             [CCGCCTCCGCCTCCCCCNCCGCGCTCTCTGCCGCGGTCTCGGCGTCGCTGACCTTCACCTCTGCCTCCTCATTTGCTGGTNCATCTTTGGGAATTGAATTCAGCTACANCAGAGTTACAACAGGAAGATNCCCGGATTCTGTCAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTTTGCTTGTGCAGTA                                         ]
[+] EMBL CF291564             [                            TGCCGCGGTCTCGGCGTCGCTGACCTTCACCTCTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTTTGCTaaaa                                              ]
[+] EMBL BF430626             [                            TGCCGCGGTCTCGGCGTCGCTGACCTTCACCTCTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCTACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTT                                                      ]
[+] EMBL AU161804             [                            TGCCGCGGTCTCGGCGTCGNTGACCTTNACCTNTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATNACCAAGAGAAATAGATCTAGGAAGTCG                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI795725             [                              CCGCGGTCTCGGCGTC CTGACCTTCACCTCTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAA TCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAAATTCAAGTTAaaaa                                                         ]
[-] EMBL CF291565             [                                                     TTCACCTCTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTTTGCT     A  AAAAAAAAA                                 ]
[+] EMBL CF338208             [                                                                                                 ATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTTTGCTTGTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF337629             [                                                                                                 ATTCAGCTACAACAGAGTTACAACAGGAAGAT CCCGGATTCTG CAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC AAATTCAAGTTAGCCTTTTTG                                                    ]




>consensus_13172#0
CCGCCTCCGCCTCCCCCNCCGCGCTCTCTGCCGCGGTCTCGGCGTCGCTGACCTTCACCT
CTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAA
CAGGAAGATCCCGGATTCTGCAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGA
GAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTA
CTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAA
AGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCT
CTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAA
CAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACA
AATTCAAGTTAGCCTTTTTGCTTGTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

consensusID : consensus_13172#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence

                              [TGGCAATTGAATTCAGCTACAGCAGAGTTACAACAGTAAGATCCCGGATTTTGCAGATTTGGGCTCTAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATGTAGTAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGTATTATTGCCGAAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTTTGCACAAAGACGAACTCCCCCACTGGTAAGAAACGAATGTTCTGATTGAATCGCATTATAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTTAAGTACATTATCAACGCAAAAAAAAAAAAAATTAACTCTGTCATGCCCGT]

[-] EMBL CF335728             [TGGCAATTGAATTCAGCTACAGCAGAGTTACAACAGTAAGATCCCGGATTTTGCAGATTTGGGCTCTAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATGTAGTAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGTATTATTGCCGAAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTTTGCACAAAGACGAACTCCCCCACTGGTAAGAAACGAATGTTCTGATTGAATCGCATTATAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTTAAGTACATTATCAACGCAAAAAAAAAAAAAATTAACTCTGTCATGCCCGT]




>consensus_13172#1
TGGCAATTGAATTCAGCTACAGCAGAGTTACAACAGTAAGATCCCGGATTTTGCAGATTT
GGGCTCTAAAGGCTGCTCTGTGCATGACCAAGAGAAATAGATGTAGTAAGTCGCTTGCCC
GTACACATGGTTTTCGCAGACGGATGAGTATTATTGCCGAAAGAAAGGTCCTGAAGCGCA
GACGCGCCAAAGGAAGAAGGGTTCTTTGCACAAAGACGAACTCCCCCACTGGTAAGAAAC
GAATGTTCTGATTGAATCGCATTATAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTT
TTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTG
TCCGGTTAATGTGTTAAGTACATTATCAACGCAAAAAAAAAAAAAATTAACTCTGTCATG
CCCGT

consensusID : consensus_13172#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 424
fasta sequence

                              [CCGGATTTTGCAAATTAGGGCTGGAAAGGTTGTTTTGTGCATGCCCAAAAAAAATAGATTTAGGAAGTCGCTTGCCCGTACACATGGTTTTTGCAAACGGATGAGGACTACTGCCGGAAAAAAGGTCCTTAAGGGCAAACGCGCCAAAAAAAAAAGGGTTTTTTGCCCAAAAAAGAACTCTCCCCCCTGGGAAAAAAAGAATGTTTTGATTGAATCGCATTTTAAGTCGCTTTTTGTCCCAATTGTAAGGGTATTTTTTTATCCCCCGTTTTGGGTTAAACTCAACCAAAACAATTGGGGCAAATCCTTCACCCGGGGTCCGGTTAATGTGTGAAGTACATTATCAACCCAAATTCAAGTTAGCCTTTTTGGTTGGGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF337628             [CCGGATTTTGCAAATTAGGGCTGGAAAGGTTGTTTTGTGCATGCCCAAAAAAAATAGATTTAGGAAGTCGCTTGCCCGTACACATGGTTTTTGCAAACGGATGAGGACTACTGCCGGAAAAAAGGTCCTTAAGGGCAAACGCGCCAAAAAAAAAAGGGTTTTTTGCCCAAAAAAGAACTCTCCCCCCTGGGAAAAAAAGAATGTTTTGATTGAATCGCATTTTAAGTCGCTTTTTGTCCCAATTGTAAGGGTATTTTTTTATCCCCCGTTTTGGGTTAAACTCAACCAAAACAATTGGGGCAAATCCTTCACCCGGGGTCCGGTTAATGTGTGAAGTACATTATCAACCCAAATTCAAGTTAGCCTTTTTGGTTGGGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13172#2
CCGGATTTTGCAAATTAGGGCTGGAAAGGTTGTTTTGTGCATGCCCAAAAAAAATAGATT
TAGGAAGTCGCTTGCCCGTACACATGGTTTTTGCAAACGGATGAGGACTACTGCCGGAAA
AAAGGTCCTTAAGGGCAAACGCGCCAAAAAAAAAAGGGTTTTTTGCCCAAAAAAGAACTC
TCCCCCCTGGGAAAAAAAGAATGTTTTGATTGAATCGCATTTTAAGTCGCTTTTTGTCCC
AATTGTAAGGGTATTTTTTTATCCCCCGTTTTGGGTTAAACTCAACCAAAACAATTGGGG
CAAATCCTTCACCCGGGGTCCGGTTAATGTGTGAAGTACATTATCAACCCAAATTCAAGT
TAGCCTTTTTGGTTGGGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

consensusID : consensus_13172#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 331
fasta sequence

                              [GGATTCGGCCGATGACAANNTATGAATCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCTACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAATTCAAGTTAGCCTTTTTGCT]

[+] EMBL AA752993             [GGATTCGGCCGATGACAANNTATGAATCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCTACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAATTCAAGTTAGCCTTTTTGCT]




>consensus_13172#3
GGATTCGGCCGATGACAANNTATGAATCGCTTGCCCGTACACATGGTTTTCGCAGACGGA
TGAGGACTACTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTC
TCTGCACAAAGACGAACTCCCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTC
TAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCTACGTTCTCGGTTATACT
CAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATT
ATCAACACAAATTCAAGTTAGCCTTTTTGCT

consensusID : consensus_13172#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 220
fasta sequence

                              [CTGACATGGCTGAGGAGTAGAAAGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAATTCAAGTTAGCCTTTTTGCTTGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF308002             [CTGACATGGCTGAGGAGTAGAAAGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAATTCAAGTTAGCCTTTTTGCTTGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13172#4
CTGACATGGCTGAGGAGTAGAAAGCATTCTAAGTCGCTCTTTGTCACAATTGTAAGTGTA
TTTTTTTATCCCACGTTCTCGGTTATACTCAACCATAACAATTGGTGCAAATCCTTCACC
CGGTGTCCGGTTAATGTGTGAAGTACATTATCAACACAAATTCAAGTTAGCCTTTTTGCT
TGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13172#1      ------------------------------------------------------------
consensus_13172#3      ------------------------------------------------------------
consensus_13172#0      CCGCCTCCGCCTCCCCCNCCGCGCTCTCTGCCGCGGTCTCGGCGTCGCTGACCTTCACCT 60
consensus_13172#2      ------------------------------------------------------------
consensus_13172#4      ------------------------------------------------------------
                                                                                   

consensus_13172#1      ---------------------------TGGCAATTGAATTCAGCTACAGCAGAGTTACAA 33
consensus_13172#3      ------------------------------------------------------------
consensus_13172#0      CTGCCTCCTCATTTGCTGGTTCATCTTTGGGAATTGAATTCAGCTACAACAGAGTTACAA 120
consensus_13172#2      ------------------------------------------------------------
consensus_13172#4      ------------------------------------------------------------
                                                                                   

consensus_13172#1      CAGTAAGATCCCGGATTTTGCAGATTTGGGCTCTAAAGGCTGCTCTGTGCATGACCAAGA 93
consensus_13172#3      ----------------------------------------------GGATTCGGCCGATG 14
consensus_13172#0      CAGGAAGATCCCGGATTCTGCAGATTAGGGCTGGAAAGGCTGCTCTGTGCATGACCAAGA 180
consensus_13172#2      ----------CCGGATTTTGCAAATTAGGGCTGGAAAGGTTGTTTTGTGCATGCCCAAAA 50
consensus_13172#4      ------------------------------------------------------------
                                                                                   

consensus_13172#1      GAAATAGATGTAGTAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGTATTA 153
consensus_13172#3      ACAANNTATG-----AATCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTA 69
consensus_13172#0      GAAATAGATCTAGGAAGTCGCTTGCCCGTACACATGGTTTTCGCAGACGGATGAGGACTA 240
consensus_13172#2      AAAATAGATTTAGGAAGTCGCTTGCCCGTACACATGGTTTTTGCAAACGGATGAGGACTA 110
consensus_13172#4      ------------------------------------------------------------
                                                                                   

consensus_13172#1      TTGCCGAAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTTTGCACAA 213
consensus_13172#3      CTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAA 129
consensus_13172#0      CTGCCGGAAGAAAGGTCCTGAAGCGCAGACGCGCCAAAGGAAGAAGGGTTCTCTGCACAA 300
consensus_13172#2      CTGCCGGAAAAAAGGTCCTTAAGGGCAAACGCGCCAAAAAAAAAAGGGTTTTTTGCCCAA 170
consensus_13172#4      ------------------------------------------------------------
                                                                                   

consensus_13172#1      AGACGAACTC-CCCCACTGGTAAGAAACGAATGTTCTGATTGAATCGCATTATAAGTCGC 272
consensus_13172#3      AGACGAACTC-CCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGC 188
consensus_13172#0      AGACGAACTC-CCCCACTGGGAAGAAACGAATGTTCTGATTGAATCGCATTCTAAGTCGC 359
consensus_13172#2      AAAAGAACTCTCCCCCCTGGGAAAAAAAGAATGTTTTGATTGAATCGCATTTTAAGTCGC 230
consensus_13172#4      ---------------------CTGACATGGCTGAG--GAGTAGAAAGCATTCTAAGTCGC 37
                                               * * *  **    ** *  *  ***** ********

consensus_13172#1      TCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATA 332
consensus_13172#3      TCTTTGTCACAATTGTAAGTGTATTTTTTTATCCTACGTTCTCGGTTATACTCAACCATA 248
consensus_13172#0      TCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATA 419
consensus_13172#2      TTTTTGTCCCAATTGTAAGGGTATTTTTTTATCCCCCGTTTTGGGTTAAACTCAACCAAA 290
consensus_13172#4      TCTTTGTCACAATTGTAAGTGTATTTTTTTATCCCACGTTCTCGGTTATACTCAACCATA 97
                       * ****** ********** **************  **** * ***** ********* *

consensus_13172#1      ACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTTAAGTACATTATCAACGC 392
consensus_13172#3      ACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC 308
consensus_13172#0      ACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC 479
consensus_13172#2      ACAATTGGGGCAAATCCTTCACCCGGGGTCCGGTTAATGTGTGAAGTACATTATCAACCC 350
consensus_13172#4      ACAATTGGTGCAAATCCTTCACCCGGTGTCCGGTTAATGTGTGAAGTACATTATCAACAC 157
                       ******** ***************** *************** *************** *

consensus_13172#1      AAAAAAAAAAAAAATTAACTCTGTCATGCCCGT--------------------------- 425
consensus_13172#3      AAATTCAAGTTAGCCT--TTTTGCT----------------------------------- 331
consensus_13172#0      AAATTCAAGTTAGCCT--TTTTGCTTGTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAA 537
consensus_13172#2      AAATTCAAGTTAGCCT--TTTTGGTTGGGCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAA 408
consensus_13172#4      AAATTCAAGTTAGCCT--TTTTGCTTGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAA 215
                       ***   **   *   *   * **                                     

consensus_13172#1      ----------------
consensus_13172#3      ----------------
consensus_13172#0      AAAAAAAAAAAAAAA- 552
consensus_13172#2      AAAAAAAAAAAAAAAA 424
consensus_13172#4      AAAAA----------- 220