cluster # 13277

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Oryza sativa
cluster # 13277 cluster # 13277 Sequences # 12 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13277#0 length = 1384 sequences # 3
consensus_13277#1 length = 948 sequences # 2
consensus_13277#2 length = 858 sequences # 4

consensus_13277#3 length = 408 sequences # 1
consensus_13277#4 length = 310 sequences # 1
consensus_13277#5 length = 195 sequences # 1

consensusID : consensus_13277#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1384
fasta sequence

                              [CTAGAATTGAAATTATTTCTATTGATTTTCCTTGAATTATCTCTTGGTACATTGTGTTTTACGCGTAGTTGGTTAGTTGCTTATGCAGGTAGAGAAAAGAGAAGGGTTTATTAAAGTGTAGCTTTCTAACTATATATCTTGTGCTGTAGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCGCAAGAGAGGGACGGGCGCCGGCGCTGCGCAGGAAATTTTACATAACGCCCAAAAATGGATGAGTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTATATCAAAATAGTAAAGTTTTTGAACATATATGATCACGTAAAAGAGCAATCGTCCATCAGTGCTTCCAGTTCCCCCAGGCATATGCTGCACTCCATCTCCGACGACTCATCCCGCCGCGCGGCGATGGTGCGCGTGGTCCGGCAGCCAGATCTTCGGATCAGGCGGCGGCGCACCGGCATGTCGACGTCGGCGATCGGCGCAGCAGAGGAGGAGCACGCACACGGCGTACAGGATGCTGCCGGCGAGGGCCCCTGTGAATAAGGAAAACCCGAACGCTTGCCAGATGGGCAGCTCTTTCAAGAACAGCATCGCGCAACTATATCTTGATAGTATTTGTTTATTTTCTGTTTTTCCAATTCCACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAATGTGTTGCAAGCATCAATCAGTTATATATGTTGCACCCTTTATATATATGCAGATCCTAAAATAGTAGCATTCCGTTCAAAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTACGCACAATATATGGATCTCTTGTTAGCTCGGACTTGATTTTTAATCCTTTTAAGATGAGATAAAAATATTGTTATGATCTGCATACATACAAGAAAGAAATGGATCAACTACGATATTATTATTGCCTGTTGATTGGATCTTTAATTAATCACCGGATAAAAAAAAAAGATCGATCTGTGAGATGCTCTGCTTCCAGAGGCGCGACGAGGCCCTGTCCATGTATGAGTATGAATGTATGATGAGGAGGAGAAGCAAAAGGGTGGCCGTGGCTGCGGCGCAGGAGGACGGTCACGTGTCAGAATCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTTTACGGCTCCTTCACTCAATGCGGTGCTAGCCAGCCAGTAGCCAAGGTCAAGGCTATCGTCACCCGAGATTGAAGATCAAGTGAGTGTTACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCCAAGAGCAAGAAGAAGAAGGAGGCTGCCTCCTCTGCCCTCCCCACTTTGGATAGGCTTCATGAGACTC]

[+] EMBL AK107809             [CTAGAATTGAAATTATTTCTATTGATTTTCCTTGAATTATCTCTTGGTACATTGTGTTTTACGCGTAGTTGGTTAGTTGCTTATGCAGGTAGAGAAAAGAGAAGGGTTTATTAAAGTGTAGCTTTCTAACTATATATCTTGTGCTGTAGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCGCAAGAGAGGGACGGGCGCCGGCGCTGCGCAGGAAATTTTACATAACGCCCAAAAATGGATGAGTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTATATCAAAATAGTAAAGTTTTTGAACATATATGATCACGTAAAAGAGCAATCGTCCATCAGTGCTTCCAGTTCCCCCAGGCATATGCTGCACTCCATCTCCGACGACTCATCCCGCCGCGCGGCGATGGTGCGCGTGGTCCGGCAGCCAGATCTTCGGATCAGGCGGCGGCGCACCGGCATGTCGACGTCGGCGATCGGCGCAGCAGAGGAGGAGCACGCACACGGCGTACAGGATGCTGCCGGCGAGGGCCCCTGTGAATAAGGAAAACCCGAACGCTTGCCAGATGGGCAGCTCTTTCAAGAACAGCATCGCGCAACTATATCTTGATAGTA TTGTTTATTTTCTGTTTTTCCAATTCCACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAATGTGTTGCAAGCATCAATCAGCTATATATGTTGCACCCTTTATATATATGCAGATCCTAAAATAGTAGCATTCCGTTC AAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTACGCACAATATATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB629281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTTGATAGTATTTGTTTATTTTCTGTTTTTCCAATTCCACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAATGTGTTGCAAGCATCAATCAGTTATATATGTTGCACCCTTTATATATATGCAGATCCTAAAATAGTAGCATTCCGTTCAAAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTACGCACAATATATGGATCTCTTGTTAGCTCGGACTTGATTTTTAATCCTTTTAAGATGAGATAAAAATATTGTTATGATCTGCATACATACAAGAAAGAAATGGATCAACTACGATATTATTATTGCCTGTTGATTGGATCTTTAATTAATCACCGGATAAAAAAAAAAGATCGATCTGTGAGATGCTCTGCTTCCAGAGGCGCGACGAGGCCCTGTCCATGTATGAGTATGAATGTATGATGAGGAGGAGAAGCAAAAGGGTGGCCGTGGCTGCGGCGCAGGAGGACGGTCACGTGTCAGAATCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTTTACGGCTCCTTCACTCAATGCGGTGCTAGCCAGCCAGTAGCCAAGGTCAAGGCTATCGTCACCCGAGATTGAAGATCAAGTGAGTGTTACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCCAAGAGCAAGAAGAAGAAGGAGGCTGCCTCCTCTGCCCTCCCCACTTTGGATAGGCTTCATGAGACTC]
[+] EMBL CB629283             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTTGATAGTATTTGTTTATTTTCTGTTTTTCCAATTCCACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAATGTGTTGCAAGCATCAATCAGTTATATATGTTGCACCCTTTATATATATGCAGATCCTAAAATAGTAGCATTCCGTTCAAAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTACGCACAATATATGGATCTCTTGTTAGCTCGGACTTGATTTTTAATCCTTTTAAGATGAGATAAAAATATTGTTATGATCTGCATACATACAAGAAAGAAATGGATCAACTACGATATTATTATTGCCTGTTGATTGGATCTTTAATTAATCACCGGATAAAAAAAAAAGATCGATCTGTGAGATGCTCTGCTTCCAGAGGCGCGACGAGGCCCTGTCCATGTATGAGTATGAATGTATGATGAGGAGGAGAAGCAAAAGGGTGGCCGTGGCTGCGGCGCAGGAGGACGGTCACGTGTCAGAATCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTTTACGGCTCCTTCACTCAATGCGGTGCTAGCCAGCCAGTAGCCAAGGTCAAGGCTATCGTCACCCGAGATTGAAGATCAAGTGAGTGTTACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCCAAGAGCAAGAAGAAGAAGGAGGCTGCCTCCTCTGCCCTCCCCACTTTGGAT                ]




>consensus_13277#0
CTAGAATTGAAATTATTTCTATTGATTTTCCTTGAATTATCTCTTGGTACATTGTGTTTT
ACGCGTAGTTGGTTAGTTGCTTATGCAGGTAGAGAAAAGAGAAGGGTTTATTAAAGTGTA
GCTTTCTAACTATATATCTTGTGCTGTAGACTGTAGCAGTCCTCTTGCTAATTACGCGTG
CGCAAGAGAGGGACGGGCGCCGGCGCTGCGCAGGAAATTTTACATAACGCCCAAAAATGG
ATGAGTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTAT
ATCAAAATAGTAAAGTTTTTGAACATATATGATCACGTAAAAGAGCAATCGTCCATCAGT
GCTTCCAGTTCCCCCAGGCATATGCTGCACTCCATCTCCGACGACTCATCCCGCCGCGCG
GCGATGGTGCGCGTGGTCCGGCAGCCAGATCTTCGGATCAGGCGGCGGCGCACCGGCATG
TCGACGTCGGCGATCGGCGCAGCAGAGGAGGAGCACGCACACGGCGTACAGGATGCTGCC
GGCGAGGGCCCCTGTGAATAAGGAAAACCCGAACGCTTGCCAGATGGGCAGCTCTTTCAA
GAACAGCATCGCGCAACTATATCTTGATAGTATTTGTTTATTTTCTGTTTTTCCAATTCC
ACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAATGTGTTGCAAGCATCA
ATCAGTTATATATGTTGCACCCTTTATATATATGCAGATCCTAAAATAGTAGCATTCCGT
TCAAAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTACGCACAATATATGGAT
CTCTTGTTAGCTCGGACTTGATTTTTAATCCTTTTAAGATGAGATAAAAATATTGTTATG
ATCTGCATACATACAAGAAAGAAATGGATCAACTACGATATTATTATTGCCTGTTGATTG
GATCTTTAATTAATCACCGGATAAAAAAAAAAGATCGATCTGTGAGATGCTCTGCTTCCA
GAGGCGCGACGAGGCCCTGTCCATGTATGAGTATGAATGTATGATGAGGAGGAGAAGCAA
AAGGGTGGCCGTGGCTGCGGCGCAGGAGGACGGTCACGTGTCAGAATCGCATCCGGACCG
GACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTTTACGGC
TCCTTCACTCAATGCGGTGCTAGCCAGCCAGTAGCCAAGGTCAAGGCTATCGTCACCCGA
GATTGAAGATCAAGTGAGTGTTACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCCAAG
AGCAAGAAGAAGAAGGAGGCTGCCTCCTCTGCCCTCCCCACTTTGGATAGGCTTCATGAG
ACTC

consensusID : consensus_13277#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 948
fasta sequence

                              [TCCGGGGGCGGTGCAGGGTGCGGCCGCACGGCTCGGCGTCGTCAATGCGGGCGATGGTAGCCTGGTAGGTTTGCACTCGTCTGGGGGGATTTGAGAGTCCTTGAGCAAGTGGATCCGTAGCTTTCGTTGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTCCCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGTGCTTTCTTCAGAAGAAGGTTTCTGCAGAAGTTGAAAAGGCTAAGGATTATACAAAAGCTAAGAACAAAAGCGCTGCAATTCAGTGTCTAAAGAAAAAGAAGCTGTATGAAACACAAATTGAGCAGCTAGCAAATTTCCAATTGCGAGTTCATGATCAGATAATAATGCTTGAGAGCGCAAAGGCAACCACAGATACCGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCATCAGTCAGTGAGTATTGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAAAATATGAGGCAGATACAGGAGGCACTTGCAACACCAATTGGCGCTTCTGCTGATTTCGACGAGGATGAACTAGAAGCAGAGCTGGAAGATCTGGAGGAGGAAGAGCTCGACCATGAGCTGCCTGAACCACCTCAGAGTACACGCATGGGACCATCAGCGAGAGTTACAACTTCATCTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTAATCACAGTTTGGAGGGATTTGTTTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGGAAATAACATGTTGTAAATTCAGTTTGTTGTAGAAAAAAACCCTTCCTTTTATAATTTGTT]

[+] EMBL AK070935             [TCCGGGGGCGGTGCAGGGTGCGGCCGCACGGCTCGGCGTCGTCAATGCGGGCGATGGTAGCCTGGTAGGTTTGCACTCGTCTGGGGGGATTTGAGAGTCCTTGAGCAAGTGGATCCGTAGCTTTCGTTGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTCCCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGTGCTTTCTTCAGAAGAAGGTTTCTGCAGAAGTTGAAAAGGCTAAGGATTATACAAAAGCTAAGAACAAAAGCGCTGCAATTCAGTGTCTAAAGAAAAAGAAGCTGTATGAAACACAAATTGAGCAGCTAGCAAATTTCCAATTGCGAGTTCATGATCAGATAATAATGCTTGAGAGCGCAAAGGCAACCACAGATACCGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCATCAGTCAGTGAGTATTGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAAAATATGAGGCAGATACAGGAGGCACTTGCAACACCAATTGGCGCTTCTGCTGATTTCGACGAGGATGAACTAGAAGCAGAGCTGGAAGATCTGGAGGAGGAAGAGCTCGACCATGAGCTGCCTGAACCACCTCAGAGTACACGCATGGGACCATCAGCGAGAGTTACAACTTCATCTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTAATCACAGTTTGGAGGGATTTGTTTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGGAAATAACATGTTGTAAATTCAGTTTGTTGTAGAAAAAAACCCTTCCTTTTATAATTTGTT]
[-] EMBL CF311198             [                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGCAAATTTCCAATTGCGAGTTCATGATCAGATAATAATGCTTGAGAGCGCAAAGGCAACCACAGATACCGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCATCAGTCAGTGAGTATTGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAAAATATGAGGCAGATACAGGAGGCACTTGCAACACCAATTGGCGCTTCTGCTGATTTCGACGAGGATGAACTAGAAGCAGAGCTGGAAGATCTGGAGGAGGAAGAGCTCGACCATGAGCTGCCTGAACCACCTCAGAGTACACGCATGGAACCATCAGCGAGAGTTACAACTTCATCTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTAATCACAGTTTGGAGGGATTTGTTTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGGAAATAACATGTTGTAAATTCAGTTTGTTGTAGAAAAAAACCCTTCCTTTTAAAAaa    ]




>consensus_13277#1
TCCGGGGGCGGTGCAGGGTGCGGCCGCACGGCTCGGCGTCGTCAATGCGGGCGATGGTAG
CCTGGTAGGTTTGCACTCGTCTGGGGGGATTTGAGAGTCCTTGAGCAAGTGGATCCGTAG
CTTTCGTTGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATG
CTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTC
CCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGTGCTTTCTT
CAGAAGAAGGTTTCTGCAGAAGTTGAAAAGGCTAAGGATTATACAAAAGCTAAGAACAAA
AGCGCTGCAATTCAGTGTCTAAAGAAAAAGAAGCTGTATGAAACACAAATTGAGCAGCTA
GCAAATTTCCAATTGCGAGTTCATGATCAGATAATAATGCTTGAGAGCGCAAAGGCAACC
ACAGATACCGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCATCAGTCA
GTGAGTATTGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAAAATATG
AGGCAGATACAGGAGGCACTTGCAACACCAATTGGCGCTTCTGCTGATTTCGACGAGGAT
GAACTAGAAGCAGAGCTGGAAGATCTGGAGGAGGAAGAGCTCGACCATGAGCTGCCTGAA
CCACCTCAGAGTACACGCATGGGACCATCAGCGAGAGTTACAACTTCATCTCAACCAGCC
AATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTAATCACAGTTTGGA
GGGATTTGTTTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGGAAATAACATGTT
GTAAATTCAGTTTGTTGTAGAAAAAAACCCTTCCTTTTATAATTTGTT

consensusID : consensus_13277#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 858
fasta sequence

                              [CTTGCATTTGTGGATATACCATTCCCTGAATATATGGTTATGAACTTATGGTTCCTTAATGTTGAAAAAAATGTTTCTCAAGCTTGTGATGACTTTGTTAATTAAGGTTTAAAGAGTTGAGGGATGAATAATGTCCAGTTTTGAAGTTTAGGGACGAATTTTAGGCTTTGATAGAGTTCAGGGACTTAAAATAATAAAATGTACTTTTCTCTTAGTTAAATGACAAACAACTTCCTGTTTGTTGCAGCTGC-AATTC--AATG-TCTAA----AGAAAAAGAAGTT--GTA-TGAAA-CACAGA-TTGAGCA-GCT-AGC-AAACTTCCAA-TTAC---GGG-TTCATGAT--CA-GATAATAATGCTTGAGAGTGCAAAGGCAACCA-CAGATACTGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCACCAGTCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATATGAGGCAGATA-CAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGATTTTGACGAGGATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTGAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTGGACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGTTGTAAATTCAGTT-TGCTGTAGAAAAAGCCCTTCCTTTTATGCTAAAAAATGTGTTTCTTCTTCGCTGTTAAAAAAAAA]

[-] EMBL CB629284             [CTTGCATTTGTGGATATACCATTCCCTGAATATATGGTTATGAACTTATGGTTCCTTAATGTTGAAAAAAATGTTTCTCAAGCTTGTGATGACTTTGTTAATTAAGGTTTAAAGAGTTGAGGGATGAATAATGTCCAGTTTTGAAGTTTAGGGACGAATTTTAGGCTTTGATAGAGTTCAGGGACTTAAAATAATAAAATGTACTTTTCTCTTAGTTAAATGACAAACAACTTCCTGTTTGTTGCAGCTGC AATTC  AATG TCTAA    AGAAAAAGAAGTT  GTA TGAAA CACAGA TTGAGCA GCT AGC AAACTTCCAA TTAC   GGG TTCATGAT  CA GATAATAATGCTTGAGAGTGCAAAGGCAACCA CAGATACTGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCACCAGTCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATATGAGGCAGATA CAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGATTTTGACGAGGATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTGAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTGGACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGTTGTAAATTCAGTTGTGCTGTAGAAAAAGCCCTTCC                                            ]
[-] EMBL CB629282             [CTTGCATTTGTGGATATACCATTCCCTGAATATATGGTTATGAACTTATGGTTCCTTAATGTGNAAAAAAATGTTTCTCAAGCTTGTGATGACTTTGTTAATTAAGGTTTAAAGAGTTGAGGGATGAATAATGTCCAGTTTTGAAGTTTAGGGACGAATTTTAGGCTTTGATAGAGTTCAGGGACTTAAAATAATAAAATGTACTTTTCTCTTAGTTAAATGACAAACAACTTCCTGTTTGTTGCAGCTGC AATTC  AATG TCTAA    AGAAAAAGAAGTT  GTA TGAAA CACAGA TTGAGCA GCT AGC AAACTTCCAA TTAC   GGG TTCATGAT  CA GATAATAATGCTTGAGAGTGCAAAGGCAACCA CAGATACTGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCACCAGTCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATATGAGGCAGATA CAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGATTTTGACGAGGATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTGAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTGGACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGTTGTAAATTCAGTT TGCTGTAGAAAAAGCCCTTCC                                            ]
[+] EMBL BI806410             [                                                                                                                                                                                                                                               ttcattgaCTGCAAATTCCGAATGTTCTAAAAAGAGAAAAGGAAGTTTGGTATTGAAACCACAGATTTGAGCAGGCTNAGCGAACCTTCCAATTTACCGGGGGTTTCATGATTCCAGGATAATAATGCTTGAGAGTGCAAAGCCAACCA CAGATACTGTTGATGCTTTGCGCTCTGGATCATCT CTGTCAAAGCTATTCACCAGTCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATATGAGGCAGATACCAGGAGGCCCTTGCAACACC ATTGGCGCTTCTGCTGATTTTGACGAGGATGAGCTAGAA CAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTGAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCCCATGATTTGGCTGAACTGACC AACTTCAAGCAGAGATGGCGCTTTGACC CAGTTTGGACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGTTGTAAATTCAGTT TGCTGTAGAAAAAGCCCTTCCTTTTATGCTAAAAAA                             ]
[-] EMBL CF312513             [                                                                                                                                                                                                                                                                                                                         GCT AGC AAACTTCCAA TTAC   GGG TTCATGAT  CA GATAATAATGCTTGAGAGTGCAAAGGCAACCACCAGATACTGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCACCAGTCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATATGAGGCAGATA CAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGACTTTGACGAGGATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTGAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTGGACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGTTGTAAATTCAGTT TGCTGTAGAAAAAGCCCTTCCTTTTATGCTAATCACTGTGTTTCTTCTTCGCTGTTAAAAAAAAA]




>consensus_13277#2
CTTGCATTTGTGGATATACCATTCCCTGAATATATGGTTATGAACTTATGGTTCCTTAAT
GTTGAAAAAAATGTTTCTCAAGCTTGTGATGACTTTGTTAATTAAGGTTTAAAGAGTTGA
GGGATGAATAATGTCCAGTTTTGAAGTTTAGGGACGAATTTTAGGCTTTGATAGAGTTCA
GGGACTTAAAATAATAAAATGTACTTTTCTCTTAGTTAAATGACAAACAACTTCCTGTTT
GTTGCAGCTGCAATTCAATGTCTAAAGAAAAAGAAGTTGTATGAAACACAGATTGAGCAG
CTAGCAAACTTCCAATTACGGGTTCATGATCAGATAATAATGCTTGAGAGTGCAAAGGCA
ACCACAGATACTGTTGATGCTTTGCGCTCTGGATCATCTGCTGTCAAAGCTATTCACCAG
TCAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAAT
ATGAGGCAGATACAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGATTTTGACGAG
GATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCT
GAACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTACTCAACCAGCC
AATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTGGA
CGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACATGT
TGTAAATTCAGTTTGCTGTAGAAAAAGCCCTTCCTTTTATGCTAAAAAATGTGTTTCTTC
TTCGCTGTTAAAAAAAAA

consensusID : consensus_13277#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence

                              [ATGAGCTGGGGCAAGAGTGAATCCCCTTCCCCCCTCTCACCCTCATGGCTCATGGGCGGTGAGCACCATGTGGTCATCAGTCCGTGTGGTCAACAACGACTTGTGTGCTGTTGTGGAAAACCAACTCAACTCGAGGTGGAGAAATCGCAGGGGCCATTTTTGAGGCTTTTTTGAGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCGCAAGAGAGGGACGGGCGCCGGCGCTCCGCAGGAAATTTTACATAACGCCCAAAAATGGATGAGTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTATATCAAAATAGTAAAGTTTTTGAACATATATGATCACGTAAAAGAGCAATCGTCCATCAGTGCTTCAACCCTAAAAGGAAAAA]

[-] EMBL CB631787             [ATGAGCTGGGGCAAGAGTGAATCCCCTTCCCCCCTCTCACCCTCATGGCTCATGGGCGGTGAGCACCATGTGGTCATCAGTCCGTGTGGTCAACAACGACTTGTGTGCTGTTGTGGAAAACCAACTCAACTCGAGGTGGAGAAATCGCAGGGGCCATTTTTGAGGCTTTTTTGAGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCGCAAGAGAGGGACGGGCGCCGGCGCTCCGCAGGAAATTTTACATAACGCCCAAAAATGGATGAGTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTATATCAAAATAGTAAAGTTTTTGAACATATATGATCACGTAAAAGAGCAATCGTCCATCAGTGCTTCAACCCTAAAAGGAAAAA]




>consensus_13277#3
ATGAGCTGGGGCAAGAGTGAATCCCCTTCCCCCCTCTCACCCTCATGGCTCATGGGCGGT
GAGCACCATGTGGTCATCAGTCCGTGTGGTCAACAACGACTTGTGTGCTGTTGTGGAAAA
CCAACTCAACTCGAGGTGGAGAAATCGCAGGGGCCATTTTTGAGGCTTTTTTGAGACTGT
AGCAGTCCTCTTGCTAATTACGCGTGCGCAAGAGAGGGACGGGCGCCGGCGCTCCGCAGG
AAATTTTACATAACGCCCAAAAATGGATGAGTGGCTGCCGACGCCATATATCACACACAA
GTTGTATTTTTCTAAGCTTTTATTATATCAAAATAGTAAAGTTTTTGAACATATATGATC
ACGTAAAAGAGCAATCGTCCATCAGTGCTTCAACCCTAAAAGGAAAAA

consensusID : consensus_13277#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence

                              [CATGGACTCAAGGAGTAGAAACTCAACGAATCTGACTCTAACCTCCATTTCCTTTACTTTCCCCTCGACTCCTCTTGGTCTTTCACCCTACTGGAACGACCATACAGATTTAGCCATTAATCATCCACCTCTTCCTTCCTAACATAGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTCCCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGT]

[+] EMBL CF311199             [CATGGACTCAAGGAGTAGAAACTCAACGAATCTGACTCTAACCTCCATTTCCTTTACTTTCCCCTCGACTCCTCTTGGTCTTTCACCCTACTGGAACGACCATACAGATTTAGCCATTAATCATCCACCTCTTCCTTCCTAACATAGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTCCCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGT]




>consensus_13277#4
CATGGACTCAAGGAGTAGAAACTCAACGAATCTGACTCTAACCTCCATTTCCTTTACTTT
CCCCTCGACTCCTCTTGGTCTTTCACCCTACTGGAACGACCATACAGATTTAGCCATTAA
TCATCCACCTCTTCCTTCCTAACATAGGCCATCATCATCTGACAGTAAGAATCCAGAGGT
GGGTGTGACAAGAAGATGCTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAG
GCTGCCTCCTCTGCGCTCCCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAG
AAGAAAGAGT

consensusID : consensus_13277#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 195
fasta sequence

                              [GAAGGAGTAGAAAAGAGACAAGAGAGTCGGAGCCGCAGCCAGCCAGTGCACTAGGGTCTAGGGCGACTCGCCGAGGTTGTTAACAGCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTGTACGGCTCCGTCACTCAATGCGGTGCTAGCCACTTAGCCAGC]

[+] EMBL CF312512             [GAAGGAGTAGAAAAGAGACAAGAGAGTCGGAGCCGCAGCCAGCCAGTGCACTAGGGTCTAGGGCGACTCGCCGAGGTTGTTAACAGCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTGTACGGCTCCGTCACTCAATGCGGTGCTAGCCACTTAGCCAGC]




>consensus_13277#5
GAAGGAGTAGAAAAGAGACAAGAGAGTCGGAGCCGCAGCCAGCCAGTGCACTAGGGTCTA
GGGCGACTCGCCGAGGTTGTTAACAGCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGG
CGGCGCAGCGGAGGCCTCAGGCTTGTGCGGCTGTACGGCTCCGTCACTCAATGCGGTGCT
AGCCACTTAGCCAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13277#0      ------------------------------------------------------------
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      TCCGGGGGCGGTGCAGGGTGCGGCCGCACGGCTCGGCGTCGTCAATGCGGGCGATGGTAG 60
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      ------------------------------------------------------------
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CCTGGTAGGTTTGCACTCGTCTGGGGGGATTTGAGAGTCCTTGAGCAAGTGGATCCGTAG 120
consensus_13277#2      ---------------CTTGCATTTGTGGATATACCATTCCCTGAATATATGGTTATGAAC 45
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      ------------------------------------------------------------
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CTTTCGTTGGCCATCATCATCTGACAGTAAGAATCCAGAGGTGGGTGTGACAAGAAGATG 180
consensus_13277#2      TTATGGTT---CCTTAATGTTGAAAAAAATGTTTCTCAAGCT---TGTGAT--GACTTTG 97
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      ------------------------------------------------------------
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CTGAAGAAACTGCTATCAAAGCCTAAGAGCAAGAAGAAGGAGGCTGCCTCCTCTGCGCTC 240
consensus_13277#2      TTAATTAAG--GTTTAAAGAGTTGAGGGATGAATAATGTCCAGTTTTGAAGTTTAGGGAC 155
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      -------------------------------------------CTAGAATTGAAATTATT 17
consensus_13277#3      --------------------------------ATGAGCTGGGGCAAGAGTGAATCCCCTT 28
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CCCACTTTGGATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGTGCTTTCTT 300
consensus_13277#2      GA-ATTTTAGG----CTTTGATAGAGTTCAGGGACTTAAAATAATAAAATGTACTTTTCT 210
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TCTATTGATTTTCCT--TGAATTAT---CTCTTGGTACATTGTGTTT-----TACGCGTA 67
consensus_13277#3      CCCCCCTCTCACCCTCATGGCTCATGGGCGGTGAGCACCATGTGGTCATCAGTCCGTGTG 88
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CAGAAGAAGGTTTCTGCAGAAGTTGAAAAGGCTAAGGATTATACAAAAGCTAAGAACAAA 360
consensus_13277#2      C----------TT-------AGTT-AAATGACAAACAACTTCCTGTTTGTTGCA------ 246
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      GTTGGTTA-GTTGCTTATGCAGGTAGAGAAAAGAGAAGGGTTTATTAAAGTGTAGCTTTC 126
consensus_13277#3      GTCAACAACGACTTGTGTGCTGTTGTGGAAAACCAACTCAACTCGAGGTGGAGAAATCGC 148
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      AGCGCTGCAATTCAGTGTCTAAAGAAAAAGAAGCTGTATGAAACACAAATTGAGCAGCTA 420
consensus_13277#2      ---GCTGCAATTCAATGTCTAAAGAAAAAGAAGTTGTATGAAACACAGATTGAGCAGCTA 303
consensus_13277#4      ------------CATGGACTCAAGGAGTAGAAACTCAACGAATC-TGACTCTAACCTCCA 47
                                                                                   

consensus_13277#0      TAACTATATATCTTGTGCTGT----AGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCG 182
consensus_13277#3      AGGGGCCATTTTTGAGGCTTTTTTGAGACTGTAGCAGTCCTCTTGCTAATTACGCGTGCG 208
consensus_13277#5      ---------------------------------------------------GAAGGAGTA 9
consensus_13277#1      GCAAATTTCCAATTGCGAGTTCATGATCAGATAATAATGCTTGAGAGCGCAAAGGCAACC 480
consensus_13277#2      GCAAACTTCCAATTACGGGTTCATGATCAGATAATAATGCTTGAGAGTGCAAAGGCAACC 363
consensus_13277#4      ------TTTCCTTTACTTTCCCCTCGACTCCTCTTGGTCTTTCACCCTACTGGAACGACC 101
                                                                                   

consensus_13277#0      CAAGAGAGGGACGGGCGCCGGCGCTGCGCAGGAAATTT-TACATAACGCCCAAAAATGGA 241
consensus_13277#3      CAAGAGAGGGACGGGCGCCGGCGCTCCGCAGGAAATTT-TACATAACGCCCAAAAATGGA 267
consensus_13277#5      GAAAAGAGACAAGAGAGTCGGAGC--CGCAGCCAGCCAGTGCACTAGGGTCTAGGGCGAC 67
consensus_13277#1      ACAGATACCGTTGATGCTTTGCGCTCTGGATCATC--TGCTGTCAAAGCTATTCATCAGT 538
consensus_13277#2      ACAGATACTGTTGATGCTTTGCGCTCTGGATCATC--TGCTGTCAAAGCTATTCACCAGT 421
consensus_13277#4      ATACAGAT--TTAGCCATTAATCATCCACCTCTTCCTTCCTAACATAGGCCATCATCA-T 158
                         * * *                                        *            

consensus_13277#0      TGA--GTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTA 299
consensus_13277#3      TGA--GTGGCTGCCGACGCCATATATCACACACAAGTTGTATTTTTCTAAGCTTTTATTA 325
consensus_13277#5      TCGCCGAGGTTGTTAACAGCGCAT-CCGGACCGGACTTGT-TCTTCTTCCGCGGGCGGCG 125
consensus_13277#1      CAGTGAGTATTGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAAAATA 598
consensus_13277#2      CAGTGAGTATCGATGACATTGAAAATGCCATTGAAGAGGCAAATGAACACACAGAGAATA 481
consensus_13277#4      CTGACAGTAAGAATCCAGAGGTGGGTGTGAC--AAGAAGATGCTGAAGAAACTGCTATCA 216
                                                    *    *   *    *       *        

consensus_13277#0      TATCAAAATAGTAAAGTT---------------TTTGAACATATATGATCACGTAAAAGA 344
consensus_13277#3      TATCAAAATAGTAAAGTT---------------TTTGAACATATATGATCACGTAAAAGA 370
consensus_13277#5      CAGCGGAGGCCTCAGGCT---------------TGTGCGGCTGTACGGCTCCGTCACTCA 170
consensus_13277#1      TGAGGCAGATACAGGAGGCACTTGCAACACCAATTGGCGCTTCTGCTGATTTCGACGAGG 658
consensus_13277#2      TGAGGCAGATACAGGAGGCCCTTGCAACACCAATTGGCGCTTCTGCTGATTTTGACGAGG 541
consensus_13277#4      AAGCCTAAGAGCAAGAAG--------AAGGAGGCTGCCTCCTCTGCGCTCCCCACTTTGG 268
                             *                                  * *                

consensus_13277#0      GCAATCGTCCATCAGTGCTTCCAGTTCCCCCAGGCATATGCTGCACTCCATCTCCGACGA 404
consensus_13277#3      GCAATCGTCCATCAGTGCTTC-AACCCTAAAAGGAAAAA--------------------- 408
consensus_13277#5      ATGCGGTGCTAGCCACTTAGCCAGC----------------------------------- 195
consensus_13277#1      ATGAACTAGAAGCAGAGCTGGAAGATCTGGAGGAGGAAGAGCTCGACCATGAGCTGCCTG 718
consensus_13277#2      ATGAGCTAGAAGCAGAGCTGGAAGATCTAGAGGAGGAAGAGCTCGAGAATGATCTGCCTG 601
consensus_13277#4      ATCGTCTCCATGAGACTCTAGAAATGCTGGAGAAGAAAGAGT------------------ 310
                                             *                                     

consensus_13277#0      CTCATCCCGCCGCGCGGCGATGGTGCGCGTGGTCCGGCAGCCAGATCTTCGGATCAGGCG 464
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      AACCACCTCAGAGTACACGCATGGGACCATCAGCGAGAGTTACAACTTCATCTCAACCAG 778
consensus_13277#2      AACCACCTCAGAGGACAAGTATGGAACCTTCAGCGAGAGTTACGACTAC---TCAACCAG 658
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      GCGGCGCACCGGCATGTCGACGTCGGCGATCGGCGCAGCAGAGGAGGAGCACGCACACGG 524
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      CCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTAATCACAGTTTG 838
consensus_13277#2      CCAATGATTTGGCTGAACTGACCAAACTTCAAGCAGAGATGGCGCTTTGACCGCAGTTTG 718
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      CGTACAGGATGCTGCCGGCGAGGGCCCCTGTGAATAAGGAAAACCCGAACGCTTGCCAGA 584
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      GAGGGATTTGTTTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGGAAAT-AACAT 897
consensus_13277#2      GACGGAATTGTCTGTATTTTGCTGACATCCTGTTTGTGTAGTGTACTCGTTTTTTAACAT 778
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TGGGCAGCTCTTTCAAGAACAGCATCGCGCAACTATATCTTGATAGTATTTGTTTATTTT 644
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      GTTGTAAATTCAGTTTGTTGTAGAAAAAAACCCTTCCTTTTAT-------AATTTGTT-- 948
consensus_13277#2      GTTGTAAATTCAGTTTGCTGTAGAAAAAG-CCCTTCCTTTTATGCTAAAAAATGTGTTTC 837
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      CTGTTTTTCCAATTCCACTTGAATTGTGTTCTGCGCCGCCCATGCATTTATGCGTAATAA 704
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      TTCTTCGCTGTTAAAAAAAAA--------------------------------------- 858
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TGTGTTGCAAGCATCAATCAGTTATATATGTTGCACCCTTTATATATATGCAGATCCTAA 764
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      AATAGTAGCATTCCGTTCAAAAAAAAAAATAGTAGCATCAGTGTATTTTAGGTATCTGTA 824
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      CGCACAATATATGGATCTCTTGTTAGCTCGGACTTGATTTTTAATCCTTTTAAGATGAGA 884
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TAAAAATATTGTTATGATCTGCATACATACAAGAAAGAAATGGATCAACTACGATATTAT 944
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TATTGCCTGTTGATTGGATCTTTAATTAATCACCGGATAAAAAAAAAAGATCGATCTGTG 1004
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      AGATGCTCTGCTTCCAGAGGCGCGACGAGGCCCTGTCCATGTATGAGTATGAATGTATGA 1064
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TGAGGAGGAGAAGCAAAAGGGTGGCCGTGGCTGCGGCGCAGGAGGACGGTCACGTGTCAG 1124
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      AATCGCATCCGGACCGGACTTGTTCTTCTTCCGCGGGCGGCGCAGCGGAGGCCTCAGGCT 1184
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      TGTGCGGCTTTACGGCTCCTTCACTCAATGCGGTGCTAGCCAGCCAGTAGCCAAGGTCAA 1244
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      GGCTATCGTCACCCGAGATTGAAGATCAAGTGAGTGTTACAAGAAGATGCTGAAGAAACT 1304
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      GCTATCAAAGCCCAAGAGCAAGAAGAAGAAGGAGGCTGCCTCCTCTGCCCTCCCCACTTT 1364
consensus_13277#3      ------------------------------------------------------------
consensus_13277#5      ------------------------------------------------------------
consensus_13277#1      ------------------------------------------------------------
consensus_13277#2      ------------------------------------------------------------
consensus_13277#4      ------------------------------------------------------------
                                                                                   

consensus_13277#0      GGATAGGCTTCATGAGACTC 1384
consensus_13277#3      --------------------
consensus_13277#5      --------------------
consensus_13277#1      --------------------
consensus_13277#2      --------------------
consensus_13277#4      --------------------