cluster # 13349

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13349 cluster # 13349 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13349#0 length = 1840 sequences # 5
consensus_13349#1 length = 1380 sequences # 5

consensus_13349#2 length = 712 sequences # 1
consensus_13349#3 length = 593 sequences # 2

consensusID : consensus_13349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1840
fasta sequence

                              [CAGTTTCCACTTTTTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAACTTCGCCTTCCGCACC-ACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATAC---GGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACTTTCAAGACAATAATGAGCAAACAAAGGTGGATCCTCCCGGTGGCCCTGCTGGAGTACCGACAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGGTGAGAACTTTGATCCATGTGGATGTGCTTCTATCAGGAGCAGCTGACAGTATTGCATGCAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACCGGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCTCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTAATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGCCGTTAGTTGCATGACAGCCTTTCCAACATGCTGCTGCCTAGCCGTAGTTCTCCCAAAAATGAAACCATCTTGAGATCCGTTTGCGGTTGAACTGAAATTAGACGGTATCTCTGGTTTCAACATCATCCTTTAAACCCTGGATGAAAGATTTGCAAT]

[+] EMBL AK105045             [CAGTTTCCACTTTTTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAACTTCGCCTTCCGCACC ACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATAC   GGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACTTTCAAGACAATAATGAGCAAACAAAGGTGGATCCTCCCGGTGGCCCTGCTGGAGTACCGACAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGGTGAGAACTTTGATCCATGTGGATGTGCTTCTATCAGGAGCAGCTGACAGTATTGCATGCAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACCGGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCTCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTAATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGC                                                                                                                                                            ]
[+] EMBL AK101704             [         CTTTCTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACGGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAACTTCGCCTTCCGCACC ACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATACGAAGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACTTTCGAGACAATAATGAGCAAACAAAGGTGGATCCTCCCGGTGGCCCTGCTGGAGTACCGACAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGGTGAGAACTTTAATCCATGTGGATGTGCTTCTATCAGGAGCAGCTGACAGTATTGCATGCAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACCGGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCCCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTAATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGCCGTTAGTTGCATGACAGCCTTTCCAACATGCTGCTGCCTAGCCGTAGTTCTCCCAAAAATGAAACCATCTTGAGATCCGTTTGCGGTTGAACTGAAATTAGACGGTATCTCTGGTTTCAACATCATCCTTTAAACCCTGGATGAAAGATTTGCAAT]
[+] EMBL CB677211             [               TCCAACGTCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAACTTCGCCTTCCGCACC ACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATAC            GAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU065680             [                                 AGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAG  NCTCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAG TGCCAGAACGTCAACTTCG CTTCCGCACC A CTGCAACATGCGCAATTGC ACCAATCCAGG CCACCGACTATAC   GG TATGCAGAA  CT TGCA NCA CGCGGCCattc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU065715             [                                 AGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCG CCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAA GNCACAAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAACTTCGCCTTCCGCACCAACTTGCAACATGCGCAATTGCAACCAATCCAGGCCCACGGACTATAC   GGATATGCAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_13349#0
CAGTTTCCACTTTTTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGC
GGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCG
CCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTT
CAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTG
GAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCC
AGAACGTCAACTTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGGC
CCACCGACTATACGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGT
CAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCC
CTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCC
CTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATG
GGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTG
GAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAA
TGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTG
GGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAG
TCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATG
GTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATA
ACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCAT
TTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTTGTTGTCATGTA
ATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACTTTCAAGACAATAATGAGC
AAACAAAGGTGGATCCTCCCGGTGGCCCTGCTGGAGTACCGACAAGTTCGCACGCCCTGC
GAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTC
CAAACAAGGTGAGAACTTTGATCCATGTGGATGTGCTTCTATCAGGAGCAGCTGACAGTA
TTGCATGCAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCC
TTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACC
GGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACC
AGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCTCTTTCTT
TCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAAT
ACTCTAATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTT
TGGCCGTTAGTTGCATGACAGCCTTTCCAACATGCTGCTGCCTAGCCGTAGTTCTCCCAA
AAATGAAACCATCTTGAGATCCGTTTGCGGTTGAACTGAAATTAGACGGTATCTCTGGTT
TCAACATCATCCTTTAAACCCTGGATGAAAGATTTGCAAT

consensusID : consensus_13349#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1380
fasta sequence

                              [TCAGTTTCCACTTTCTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCT-GCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGAC-TGGGTTTGCCCCAGCTGCCAGAACGTCAAC-TTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATACGAAGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATA-CACCAAGACC-TGAAAACCAGGGGTCCAAACCTGAT-GGTGCAA-GAGGT-CCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATT-CCGCACAAAATGTAACCGTCCAAGTTG-CGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTGGTACTCTGGGAAAATGGCAATTTATGATATAAATTTCAATTAGCTAAAAA]

[+] EMBL AK070148             [TCAGTTTCCACTTTCTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCT GCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGAC TGGGTTTGCCCCAGCTGCCAGAACGTCAAC TTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTATACGAAGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATA CACCAAGACC TGAAAACCAGGGGTCCAAACCTGAT GGTGCAA GAGGT CCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATT CCGCACAAAATGTAACCGTCCAAGTTG CGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTGGTACTCTGGGAAAATGGCAATTTATGATATAAAT                ]
[+] EMBL AU065670             [                                  AGAGAGAAAGAGCAAAACNCTAACCGCGGCGCTCCG CCCCTTCCGCCGCCGGATTCCNCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCNGCTCCGAA GA CNCAGGCCTTGTCGCCGCGTCGCTTGCNCCGCCGCCGGTTTCAGCAGCAGCCACNNCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTNGCTGGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTTGGGTTTGCCCCAGTTGCCAGAACGTCAACTTTCG CTTCNGAACAACtngaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU030367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGGCTTACCTGCTGGTCCTGGTCCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATA CACCAAGACC TGAAAACCAGGGGTCCAAACCTGAT GGTGCAA GAGGT CCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATT CCGCACAAAATGTAACCGTCCAAGTTG CGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTGGTACTCTGGGAAAATGGCAATTTATGATATAAATTTCAATTAGCTAAAAA]
[+] EMBL AU030324             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gtTCCTNGTCCCNTGGGCGCGNGGGCTGGTTCA ATTCCGAGGNCGGATCCCNGANGAAGCCTGCCGGNGCTGGGCGTNATAATGATTGGAAATGCCCTCATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTNACATGAGAANGTGCCATA CACCAAGACC TGAAAACCCGGNGTCCAAACCTGAT GGTGCAA GCNGT CCAAAACCAAAGATGCCAGAAGGTCGTTGGNNGTGCGAGNNGTGCNATAACATAAACTATCCATT CCGCACAAAATGTAACCGTCCAAGTTG CGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTNGAACAGTTATGNGGGTCAAGANGGTCCAGCGTCGTCGTCAAGGTTCNGTCTGAATGTCTGGGGTCTATCTGTGTCNGTNGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGNGTGGCAACTGGNGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTNGTACTCTGGGAAAATGGNNATTTATGATATAAATTTCNATTTGCTAAAAA]
[+] EMBL AU030483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGTGCAATACCCCCAAGGCCTTGAAACCCGGGGNTCCAACCCTGATGGGTGCAAGGAGNTCCCAAACCCAAAGATNCCAGAAGGTAGTTGGAAGTCCGAGAAGTGCAATAACATAAACTANCCATTCCCGCACAAAATGTAACCGTCCAAGTTGCCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTGGTACTCTGGGAAAATGGCAATTTATGATATAAATTTCAATTAGCTAAAAA]




>consensus_13349#1
TCAGTTTCCACTTTCTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCG
CGGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGC
GCCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTT
TCAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCT
GGAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGC
CAGAACGTCAACTTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGG
CCCACCGACTATACGAAGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCC
ATGTCAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCT
CCCCCTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAG
TTCCCTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCC
TATGGGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCA
GGTGGAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGT
CCAATGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGA
GCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGG
ACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCT
GATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGC
AATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAG
CCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTGAGTCCTA
GAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTG
GGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGT
CCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGAT
TTTGGTTAAGAACATCCCTTGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTC
TTGGTTACTGGTACTCTGGGAAAATGGCAATTTATGATATAAATTTCAATTAGCTAAAAA

consensusID : consensus_13349#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 712
fasta sequence

                              [TCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGGTGCATAATTAGAACCTCCAGTATGATCATCATTATATGCCATGCCTTTCTTTAGAACAATTCAATATAAATTGCATATCTTATGTTTTCTATCAACAGTTTCGTTTATTTGCTTGTCTTCATCATCTCTTGTGCATGGCTTGATATATCATGTCCTTACTGTTACAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATAAAAAAAGGA]

[-] EMBL CB677212             [TCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGGTGCATAATTAGAACCTCCAGTATGATCATCATTATATGCCATGCCTTTCTTTAGAACAATTCAATATAAATTGCATATCTTATGTTTTCTATCAACAGTTTCGTTTATTTGCTTGTCTTCATCATCTCTTGTGCATGGCTTGATATATCATGTCCTTACTGTTACAGTGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATAAAAAAAGGA]




>consensus_13349#2
TCCCAGAAGAAGCCTGCAGGAGCTGGGCGTGATAATGATTGGAAATGCCCTAATTGCAAC
AACATTAACTTTGCATTCCGGACAGTCTGTAACATGAGAAAGTGCAATACACCAAGACCT
GAAAACCAGGGGTCCAAACCTGATGGTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGT
AGTTGGAAGTGCGAGAAGTGCAATAACATAAACTATCCATTCCGCACAAAATGTAACCGT
CCAAGTTGCGAGGCTGAAAAGCCATTTCAGACAAACAATGCTAATGAGTCATCTGCTGAT
CAGGACAATCAGGTGCATAATTAGAACCTCCAGTATGATCATCATTATATGCCATGCCTT
TCTTTAGAACAATTCAATATAAATTGCATATCTTATGTTTTCTATCAACAGTTTCGTTTA
TTTGCTTGTCTTCATCATCTCTTGTGCATGGCTTGATATATCATGTCCTTACTGTTACAG
TGAGTCCTAGAACAGTTATGAGGGTCAAGAAGGTCCAGCGTCGTCGTCAAGGTTCAGTCT
GAATGTCTGGGGTCTATCTGTGTCAGTAGTCGCTGCTGTATCCCCTTGAGACCTTAGTTG
AGTCGTCGTCCTAATGGTAAACGTTTTGGAGTGGCAACTGGAGTCATGGATTTCTTTATT
GCTACAGATTTTGGTTAAGAACATCCCTTGTGAATTTGTCATAAAAAAAGGA

consensusID : consensus_13349#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 593
fasta sequence

                              [TGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACNTTTCAAGACAATAATGAGCAAACAAAGGTGGGATCCTCCCCGGTGGCCCTGCTGGAGTACCGACAAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACC-GGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCCCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTCATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGCCGTTAGTTGCAAAAA]

[-] EMBL CF311690             [TGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCAACTTTCACATGACNTTTCAAGACAATAATGAGCAAACAAAGGTGGGATCCTCCCCGGTGGCCCTGCTGGAGTACCGACAAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGCAGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTTACTCCGTACCATATCTGTGTGGAGTGTGCACACC GGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCCCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTCCTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTCATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGCCGTTAGTTGCAAAAA]
[-] EMBL CF311661             [                                                                                                                                                                                                                                                                                CCTTGATGTAAGAATGCAGATCAGTCTTACTCGGGACCATATCTGTGTGGAGTGTGCACACCGGGAAGCATAGTCATTTTTTGAATGGTCGATTGCTTCTTCCCCAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTCTTTCAGTGTGAAGGTGTTTTTTTACCCCTTTCTTTCGTTCAGTCATT                                                                                                                              ]




>consensus_13349#3
TGCTGATCAGGACAATCAGTTGTTGTCATGTAATATTGTGAAGCTTTTATCAAAGCTGCA
ACTTTCACATGACNTTTCAAGACAATAATGAGCAAACAAAGGTGGGATCCTCCCCGGTGG
CCCTGCTGGAGTACCGACAAAGTTCGCACGCCCTGCGAATGGCAGCTCTCAGTGAGTTGC
AGAACAGTGTTAAGAGCTGATACCCTTTTCATTTTCCAAACAAGTGATCTTGCTAAGGAA
GTTGGAGATGGGAAACATCGTGTGATGGCCAGCCTTGATGTAAGAATGCAAATCAGTCTT
ACTCCGTACCATATCTGTGTGGAGTGTGCACACCGGAAGCATAGTCATTTTTTGAATGGT
CGATTGCTTCTTCCACAGTAAAGTCTATAATACCAGTGTGCAGGTGTTTTTTTCCCTTTC
TTTCAGTGTGAAGGTGTTTTTTTACCCCTTTCTTTCGTTCATTCATTCTTTTTCTTTTTC
CTTGTTGAGACGGTATCCTGGAGCACTTTGTAATACTCTCATGTGCTTCGGAAAGTAGAA
TATAAGTTGTGCTTATGGGCGGGCCAAAATGCTTTGGCCGTTAGTTGCAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13349#0      CAGTTTCCACTTTTTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGC 60
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GGCGCTCCGCCCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCG 120
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CCGCCCTGCTCCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTT 180
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CAGCAGCAGCCACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTG 240
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GAAAGCGTGCCCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCC 300
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      -------------------------------------------------TCAGTTTCCAC 11
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      AGAACGTCAACTTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGGC 360
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      TTTCTTCCAAAGCCGAAAAATCGAGAGAGAAAGAGCAAAACCCTAACCGCGGCGCTCCGC 71
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CCACCGACTATACGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGT 420
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CCCCTTCCGCCGCCGGATTCCTCCTCCTCCTTCGTCCGCCTTCGCCGGCGCCGCCCTGCT 131
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CAGGGGGATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCC 480
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CCGAAGGAGCCCAGGCCTTGTCGCCGCGTCGCTTGCCCCGCCGCCGGTTTCAGCAGCAGC 191
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CTTATGGCACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCC 540
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CACCCCCACCACCATGTCTTCTCAGGTCGACAACCGTAGCCAATCTGCTGGAAAGCGTGC 251
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      CTGGGGGTTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATG 600
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CCGCACCGACGGTGGGCGGCGTGAGGACGACTGGGTTTGCCCCAGCTGCCAGAACGTCAA 311
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GGCCGCCGATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTG 660
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CTTCGCCTTCCGCACCACCTGCAACATGCGCAATTGCAACCAATCCAGGCCCACCGACTA 371
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GAATGTATGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAA 720
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      TACGAAGGATATGCAGAAACCTATGCAGACACCGCCGCCCCATTTCCCCATGTCAGGGGG 431
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      TGGGCGCGAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTG 780
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      ATACATGAGCCCAGGGACGCCGCCATCCATGTACCTCGGGGGTGGTGCTCCCCCTTATGG 491
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GGCGTGATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATTCCGGACAG 840
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      CACCTCCCTCTATGGCGGACCTGCTTTACCACGTTATGGTATTGCTCAGTTCCCTGGGGG 551
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      TCTGTAACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATG 900
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      TTCTGGATATCCATATGGCTATGGTGGCCGCCTGCCAATGGGGAGCCCCTATGGGCCGCC 611
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      GTGCAAGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATA 960
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      GATGCATATGGCAGGGCCTCCATATTCTGCTGGATCCATGATGGGACCAGGTGGAATGTA 671
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      ACATAAACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCAT 1020
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      TGGGATGCCCATGGACAGATATAGCTTGGGCTTACCTGCTGGTCCTGGTCCAATGGGCGC 731
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      TTCAGACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGTTGTTGTCATGTA 1080
consensus_13349#3      ----------------------------TGCTGATCAGGACAATCAGTTGTTGTCATGTA 32
consensus_13349#1      GAGGGCTGGTTCATATTCCGAGGAAGGATCCCAGAAGAAGCCTGCAGGAGCTGG-GCGTG 790
consensus_13349#2      ----------------------------TCCCAGAAGAAGCCTGCAGGAGCTGG-GCGTG 31
                                                   * *         *   ***  * **    ** 

consensus_13349#0      ATATTG--TGAAGCTTTTATCAAAGCTGCAACTTTCACATGACTTT-CAAGACAATAATG 1137
consensus_13349#3      ATATTG--TGAAGCTTTTATCAAAGCTGCAACTTTCACATGACNTTTCAAGACAATAATG 90
consensus_13349#1      ATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATT-CCGGACAGTCTGT 849
consensus_13349#2      ATAATGATTGGAAATGCCCTAATTGCAACAACATTAACTTTGCATT-CCGGACAGTCTGT 90
                       *** **  ** *  *    * *  **  **** ** ** *  * ** *  **** *    

consensus_13349#0      AGCAAACAAAGGTGG-ATCCTCCC-GGTGGCCCTGCTGGAGTACCGACAA-GTTCGCACG 1194
consensus_13349#3      AGCAAACAAAGGTGGGATCCTCCCCGGTGGCCCTGCTGGAGTACCGACAAAGTTCGCACG 150
consensus_13349#1      AACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCA 909
consensus_13349#2      AACATGAGAAAGTGCAATACACCAAGACCTGAAAACCAGGGGTCCAAACCTGATGGTGCA 150
                       * **    ** ***  ** * **  *         *  * *  ** *    * * *  * 

consensus_13349#0      CCCTGC---GAATGGCAGCTCTCAGTGAGTTGC-AGAACAGTGTTAAGAGCTG----ATA 1246
consensus_13349#3      CCCTGC---GAATGGCAGCTCTCAGTGAGTTGC-AGAACAGTGTTAAGAGCTG----ATA 202
consensus_13349#1      AGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATA 969
consensus_13349#2      AGAGGTCCAAAACCAAAGATGCCAGAAGGTAGTTGGAAGTGCGAGAAGTGCAATAACATA 210
                           *     **    ** *  ***   ** *   ***  * *  *** **      ***

consensus_13349#0      CCCTTTTCATTTTCCAAACAAGGTGA--GAACTTTGATCCATGTGGATGTGCTTCTATCA 1304
consensus_13349#3      CCCTTTTCATTTTCCAAACAAG-------------------------------------- 224
consensus_13349#1      AACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAG 1029
consensus_13349#2      AACTATCCATTCCGCACAAAATGTAACCGTCCAAGTTGCGAGGCTGAAAAGCCATTTCAG 270
                         ** * ****   ** * **                                       

consensus_13349#0      GGAGCAGCTGACAGTATTGCATGCAGTGATCTTGCTAAGGAAGTTGGAGATGGGAAACAT 1364
consensus_13349#3      --------------------------TGATCTTGCTAAGGAAGTTGGAGATGGGAAACAT 258
consensus_13349#1      ACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAG------------------ 1071
consensus_13349#2      ACAAACAATGCTAATGAGTCATCTGCTGATCAGGACAATCAGGTGCATAATTAGAACCTC 330
                                                 *****  *  **  *                   

consensus_13349#0      C-GTGTGATGGCCA-----------GCCTTGATGTAAGA--ATGCAA-ATCAGTCTTACT 1409
consensus_13349#3      C-GTGTGATGGCCA-----------GCCTTGATGTAAGA--ATGCAA-ATCAGTCTTACT 303
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      CAGTATGATCATCATTATATGCCATGCCTTTCTTTAGAACAATTCAATATAAATTGCATA 390
                                                                                   

consensus_13349#0      CCGTACCATATCTGTGTGGAGT---GTGCACACCGGAAGCATAGTCATTTTTTGAA---- 1462
consensus_13349#3      CCGTACCATATCTGTGTGGAGT---GTGCACACCGGAAGCATAGTCATTTTTTGAA---- 356
consensus_13349#1      ------------------------------------------------------------
consensus_13349#2      TCTTATGTTTTCTATCAACAGTTTCGTTTATTTGCTTGTCTTCATCATCTCTTGTGCATG 450
                                                                                   

consensus_13349#0      ---TGGTCGATTGCTTCTTC-----CACAGTAAAGTCTATAA----TACCAGTGTGCAGG 1510
consensus_13349#3      ---TGGTCGATTGCTTCTTC-----CACAGTAAAGTCTATAA----TACCAGTGTGCAGG 404
consensus_13349#1      ------------------------------TGAGTCCTAGAACAGTTATGAGGGTCAAGA 1101
consensus_13349#2      GCTTGATATATCATGTCCTTACTGTTACAGTGAGTCCTAGAACAGTTATGAGGGTCAAGA 510
                                                     * *   *** **    **  ** **  ** 

consensus_13349#0      TGTTTTTTTCCCTTTCT-----TTCAGTGTGAAGGTGTTTT-TTTACCTCTTTCTTTCGT 1564
consensus_13349#3      TGTTTTTTTCCCTTTCT-----TTCAGTGTGAAGGTGTTTT-TTTACCCCTTTCTTTCGT 458
consensus_13349#1      AGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGT 1161
consensus_13349#2      AGGTCCAGCGTCGTCGTCAAGGTTCAGTCTGAATGTCTGGGGTCTATCTGTGTCAGTAGT 570
                        * *       * *  *     ****** **** ** *    * ** *  * **  * **

consensus_13349#0      TCATTCATTCTTTTTCTTTTTCCTT-GTTGAGACGGTATCCT---GGAGCACTTTGTAAT 1620
consensus_13349#3      TCATTCATTCTTTTTCTTTTTCCTT-GTTGAGACGGTATCCT---GGAGCACTTTGTAAT 514
consensus_13349#1      CGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGA 1221
consensus_13349#2      CGCTGCTGTATCCCCTTGAGACCTTAGTTGAGTCGTCGTCCTAATGGTAAACGTTTTGGA 630
                          * *  * *     *    **** ****** **   ****   **   ** ** *   

consensus_13349#0      ACTCTAATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTT 1680
consensus_13349#3      ACTCTCATGTGCTTCGGAAAGTAGAATATAAGTTGTGCTTATGGGCGGGCCAAAATGCTT 574
consensus_13349#1      GTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAG--AACATCCCT 1279
consensus_13349#2      GTGGCAACTGGAGTCATGGATTTCTTTATTGCTACAGATTTTGGTTAAG--AACATCCCT 688
                             *   *  **    * *    ***   *   * ** ***    *  ** ** * *

consensus_13349#0      TGGCCGTTAGTTGCATGACAGCCTTTCCAACATGCTGCTGCCTAGCCGTAGTTCTCCCAA 1740
consensus_13349#3      TGGCCGTTAGTTGCAAAAA----------------------------------------- 593
consensus_13349#1      TGTGAATTTGTCATATACTTCTGAAGCTTGGTTGCTTTGTCTTGGTTACTGGTACTCTGG 1339
consensus_13349#2      TGTGAATTTGTCATAAAAAAAGGA------------------------------------ 712
                       **    ** **   *                                             

consensus_13349#0      AAATGAAACCATCTTGAGATCCGTTTGCGGTTGAACTGAAATTAGACGGTATCTCTGGTT 1800
consensus_13349#3      ------------------------------------------------------------
consensus_13349#1      GAAAATGGCAATTTATGATATAAATTTCAATTAGCTAAAAA------------------- 1380
consensus_13349#2      ------------------------------------------------------------
                                                                                   

consensus_13349#0      TCAACATCATCCTTTAAACCCTGGATGAAAGATTTGCAAT 1840
consensus_13349#3      ----------------------------------------
consensus_13349#1      ----------------------------------------
consensus_13349#2      ----------------------------------------