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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13412#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1252 fasta sequence
[CTCGTCTCTCTCTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA-TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA-TAGAGAAAA--CTGTAGCACTTT-TGGTT--TTT-GAAGATATAAAGAACT-GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA-GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC-AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA-CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA-GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA-TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC-AAAAAACGTGGAATCA-GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCAAAAAAAATCTTTTGTCGAACCTTTCACTTCTATTACACGAAATGTT]
[+] EMBL AK070766 [CTCGTCTCTCTCTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGGGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTG ]
[+] EMBL OSC1011 [ CTCCCCAACCTACTCTCTTCTCCTGCAGTCCAGCTCTCGGTTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGNCGNCGG GGAGTGGCGACGGCTTGATCGGCCCTGGACACCCGTCNCGCCTCGNCTCGNCTCTGACTCT ]
[+] EMBL AK060384 [ TTCCTTGCTCCTCCAAGTCTCCGTCGGATCCATCCTCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCGCTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTT ]
[+] EMBL BE041012 [ TCCCCTACCCCGCGAAACCCTAGCCTCCCGAGCCCCTCGCCGCCGGCGGA TGGCGACGGCTTGATCGGCCCTGGACACCCGCCCCGCCTCGCCTCGCCTCTGCCTCTCCCCGCTCCCCCCGCGCATCTGATGTTCCTCTCCCGCATCGTCCTCCGCGACCTGGACTCCATCGACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTCGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGT GCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATG TTATCAACGATTGAA GACC CAAG GAAGTT ATGCTGTC TTGCTACAAGC AAGTTATG GAAAGATCC AAGCT TCTA CC TCTAAAGAgt ]
[+] EMBL BF430478 [ ACTCCCCCGCCGCCTCCATGGCGTCCTCCAAGAAGCTGGTGACGCGTGACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCCAAAAGCT CCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAACCCAATTGGACGAAAAGGGAGCATATCCACGAATTAACAATTTCTTCACTGCCGCAC ]
[+] EMBL AU223243 [ GACGAGTGGGAGCGGAAGCTCCGCGACGTCAAGATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCNCCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCNCGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT AAAAAAAAAA ]
[+] EMBL AU174765 [ ATCCGCAAGGAGGACATGAACCGCCTCGTCATGAACTTCCTCGTCACCGAGGGCTTCGTCGACGCTGCGGACAAGTTCCGCGTCGAGTCCGGCACCCAACCGGATATTGACCTGGCCACCATCACGGATCGGATGGAGGTGAAGAGAGCGGTGCAATCAGGGAATGTTCAGGAGGCCATCGAGAAGATTAACGATCTTAATCCCACGATTCTGGACACAAATCCCCAACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATAT ]
[+] EMBL CB681212 [ AACTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTTTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCATTCAACATCTTTTGTCGAACCTTTCACTTCTATTACACGAAATGTT]
[-] EMBL BE040347 [ atCTGTACTTTCATCTGCAACAACAGAAGCTAATAGAATTGATTCGTGCGGGAAAAATAAATGAAGCTTTGGAGTNTGCACAAGAAGAACTCGCTCCAAGAGGCGAAGAAAATCAAGTCTTTCTTGAAGAAA TAGAGAAAA CTGTAGCACTTT TGGTT TTT GAAGATATAAAGAACT GTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACACA TTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCc ]
[+] EMBL BI807273 [ TCTTTCTGGAAGAAAGTAGAGAAAAACCTGTAGCACTTTNTGGTTTGTTTGGAAGATATAAAGAACTGGTCCATATGGGGAACTATTGGATGTTTCCCAACGATTGAA GACCGCAAGTGAA TTAATGCT CCATTCTTACAAGCC AAGTCATGAGAAAGATCC AAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCATAA CC ACTGGACGAAAAGGCAGCATATCCACGAATCAAC ATTTCTCCACT CCGCACTTGAAGATCCA GCGATTTGA GCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCACCATACCATGACTGTTTTCACAC TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTC AATGC AAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCAC TTTTAATCTGTGAAAAATGTTCGATTTGATTTGA ]
[+] EMBL BM038010 [ aAACTATTGGATGTTTCCCCACGATTGAACGCCCGCAAGTGAAGTTAATCCTCCCATTCTTACAACCCAAAGTCATGAGAAAGATCC CAAGCTCCCTACCCTTCTAAAGATGTTGATTTGGACTCCAAA CCCACTGGACGAAAA GCAGCATATCCCCGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCACGCGATTTGA GCCGCTCGGGAGGGGATGGCTAAAGAATGTA GCACCATACCCTGACTGTTTTCACACACTTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCT CAACAGTGAATCCCGTGCTTTCTTCGGTCTTTGATCTCAATCCC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGGGTTCAAAAAAAAaa ]
[+] EMBL AU174764 [ GGATGTTTCCCAACGATTGAA GNCCGCAAGTGAAGTTAATGCTGCCATTCTTACAAGCCAAAGTCATGAGAAAGATCC AAAGCTCCCTAGCCTTCTAAAGATGTTAATTTGGACTCAAAA CCAACTGGACGAAAAGGCAGCATATCCACGAATCAACAATTTCTCCACTGCCGCACTTGAAGATCCA GCGATTTGAGGCCGCTCGGGAGGGGATGGCTAAAGAATGTAGGCNCCATACCATGACTGTTTTCACACA TTGTACTTCCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGC AAAAAACGTGGAATCA GAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATGTTCGATTTGATTTGAGTTCAAAAAAAA ]
[+] EMBL CA764653 [ AGAATGTAGGCACCATACCATGACTGTTTT ACACA TTGTACTTTCTGGATCTGTTGTGCTCTTCACCTGCAAGGCTGCAACAGTGAATCCAGTGCTTTCTTCGGTCTTTGATCTCAAATGCAAAAAAACGTGGAATCATGAAAAAAAAATCGCTCGTGTTGTACATGATGTAGAAGATGTTCATCACATTTTAATCTGTGAAAAATG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||