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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2920 fasta sequence
[TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA-TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA-TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT-CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATAATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATGATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCGCCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC-CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCCGCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACGGCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGGAGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCGTGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT]
[+] EMBL C72480 [TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTNGGTCCAGAAATTCAGG ]
[+] EMBL AK101789 [ CCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATT ]
[+] EMBL C73119 [ CATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGNCCTGTAATGCTGGATACACTGGGGCCAGAATTTAAGGGTCACAANTTAAATGGGGGGACC ATTGAGTTGAAAGTTGGGAATCAaggtancct ]
[+] EMBL AK060466 [ TCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGGTGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAGCACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTT ]
[+] EMBL OSC01721 [ CTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTNAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGNCAGTGTTGGCCGTTGTCTTNCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAA ]
[+] EMBL AU075390 [ GAATTATGTGNAAAACCTGAGTCTGTGTATAACCAGTTGGTTCACTTCCAAGAAATTAGTGAAGCATGTAGNTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACAaaaa ]
[+] EMBL AU172523 [ GGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTAaaaaaaa ]
[-] EMBL BI795077 [ TGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAA TTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAA ]
[-] EMBL AK059179 [ TAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATAATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATGATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCGCCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCCGCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACGGCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGGAGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCGTGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT]
[-] EMBL BI798030 [ GTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGATGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGCCGTCCTT ]
[-] EMBL BI798671 [ TCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGATGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGCGCGTCCTTCTTGGCGTTCCCGCCGA CCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCa ]
[-] EMBL CF197071 [ CGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAG ]
consensusID : consensus_13461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence
[CTGAACCAACAAAGTGGCNTNCTACGGCAAAAACTCNGGCAAGNCAATGTTTGCTGCAAAAGTTGCCTACCCCTTGATGNCNAATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGCACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU082659 [CTGAACCAACAAAGTGGCNTNCTACGGCAAAAACTCNGGCAAGNCAATGTTTGCTGCAAAAGTTGCCTACCCCTTGATGNCNAATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGCACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13461#0 TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTG 60
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAAC 120
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGT 180
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGAT 240
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGC 300
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGAC 360
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGA 420
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGACCAATTGAGTTGAAAGC 480
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCC 540
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 AATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCA 600
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 ATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGG 660
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 AGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTT 720
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCAT 780
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGC 840
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGAT 900
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 ATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGC 960
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTT 1020
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCAC 1080
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGT 1140
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGG 1200
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTGCAGAAGCTGAGTCTGT 1260
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCA 1320
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAAT 1380
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAAT 1440
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTA 1500
consensus_13461#1 -----------------------------------CTGAACCAACAAAGTGGCNTNCT-A 24
**** ************* * ** *
consensus_13461#0 CGGCACAA-CTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGA 1559
consensus_13461#1 CGGCAAAAACTCNGGCAAGNCAATGTTT-GCTGCAAAAGTTGCCTACCCCTTGATGNCNA 83
***** ** *** ****** ******** ******* ** ** ****** ****** * *
consensus_13461#0 GTACTGAGGAGGCT--GAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGC 1617
consensus_13461#1 ATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGC 143
************ ********** * * ******** *******************
consensus_13461#0 ACAG--AACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTC 1675
consensus_13461#1 ACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTC 203
*** ************ *****************************************
consensus_13461#0 CAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATT 1735
consensus_13461#1 CAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATT 263
******* ****************************************************
consensus_13461#0 AGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGC 1795
consensus_13461#1 AGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGC 323
************************************************************
consensus_13461#0 TTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTG 1855
consensus_13461#1 TTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTG 383
************************************************************
consensus_13461#0 GCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATT 1915
consensus_13461#1 GCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATT 443
******************* ****************************************
consensus_13461#0 TACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTAC 1975
consensus_13461#1 TACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 481
**** ********** ** * **** * *
consensus_13461#0 TTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCA 2035
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 AACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATA 2095
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 ATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATG 2155
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 ATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCG 2215
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGG 2275
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTC 2335
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 CAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGG 2395
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 ATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTG 2455
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAG 2515
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 AACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGC 2575
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TCCTTCTTCCGGCCGCCGCCGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGG 2635
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCC 2695
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACG 2755
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 GCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGG 2815
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 AGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCG 2875
consensus_13461#1 ------------------------------------------------------------
consensus_13461#0 TGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT 2920
consensus_13461#1 ---------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||