cluster # 13557

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Oryza sativa
cluster # 13557 cluster # 13557 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13557#0 length = 817 sequences # 4
consensus_13557#1 length = 688 sequences # 3

consensus_13557#2 length = 639 sequences # 5
consensus_13557#3 length = 407 sequences # 1

consensusID : consensus_13557#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 817
fasta sequence

                              [CCTTCTCCCTTCGGTTTCCCCTTCTTAATTCTTCTCGCCTCGAGCGAAAATCTTATCATTGTAGTTCTTTCCATCGCAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGAAAAAAAAGTTGCCTTCATCTGTTCACTTGTAATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAGATGTGTCCTTCAATGGACCTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071748             [CCTTCTCCCTTCGGTTTCCCCTTCTTAATTCTTCTCGCCTCGAGCGAAAATCTTATCATTGTAGTTCTTTCCATCGCAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAA                                                                                                                                                      ]
[+] EMBL CB000014             [                                                                                                   GGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCATCTGTTCACTTGTAATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAGATGTGTCCTTCAATGGACCTGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AT003723             [                                                                                                                                                                                                                                                                                              GATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGAAAAAAAA                                                                                                                               ]
[+] EMBL AT003704             [                                                                                                                                                                                                                                                                                                      GCCTGGTGGGAGAGGTCCTGGTGGTGGCCCTTATGGGGGCGNCCGCGGCGGTGGAGGCGGCCTCCAAGGTCCTCGCACGCTATCTGGCATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGNTCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGGGCTATGNACGACTCTAAGATCCTTTTGATGTCNTTTTTTAGGAGCAAGTCTGANTTCTGAAAATTTTAGAACGTATATNATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCNAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGAAAAAAAA                                                                                                                               ]




>consensus_13557#0
CCTTCTCCCTTCGGTTTCCCCTTCTTAATTCTTCTCGCCTCGAGCGAAAATCTTATCATT
GTAGTTCTTTCCATCGCAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTA
CGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGA
CTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGA
AAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGG
TGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCG
AGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGG
ATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTA
AGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTAT
ATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTT
AGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATAT
TATGCAACTTGTTTCTGACGTGAAAAAAAAGTTGCCTTCATCTGTTCACTTGTAATTGTG
AGTTTATGCATGTTTTTAGTCAGTTAAAGATGTGTCCTTCAATGGACCTGCCCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13557#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 688
fasta sequence

                              [TTNGGATGAGCATAACAGCAATAGTATGTTANGNTNNGCGGGGGTNGAAGACCAACGGACAATNGGGGGTANGGAAAATTTTGGATTTTTCCGGGGTAATGGGGAATTTNNNCNGAAANTTTTTCCTACCAAGNTTTTNGGTGGGAAAAANNGNNCAGCATAGGGAAGGGGTAGGNTTTTNGTTAAGAAATGGGAGGGTGGGCCTGGNGGGGAGTTCNTNGGNGGGGGCCCTTAATGGGGGCGGCCCGCGCCGGTGGAGGCGGCCTTCCGAGGTCCTTCGCACACTATCTGACATCCGATCTAACGATCAGATTCTCTCCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL BE229214             [TTNGGATGAGCATAACAGCAATAGTATGTTANGNTNNGCGGGGGTNGAAGACCAACGGACAATNGGGGGTANGGAAAATTTTGGATTTTTCCGGGGTAATGGGGAATTTNNNCNGAAANTTTTTCCTACCAAGNTTTTNGGTGGGAAAAANNGNNCAGCATAGGGAAGGGGTAGGNTTTTNGTTAAGAAATGGGAGGGTGGGCCTGGNGGGGAGTTCNTNGGNGGGGGCCCTTAATGGGGGCGGCCCGCGCCGGTGGAGGCGGCCTTCCGAGGTCCTTCGCACACTATCTGACATCCGATCTAACGATCAGATTCTCTCCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCAC                                                                                       ]
[+] EMBL AU058083             [                                                                                                                                                                                                                                                                                                                      aATTCTCT CCCTGCTTGT GATCCTGCNGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAA                                                     ]
[+] EMBL CF318582             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13557#1
TTNGGATGAGCATAACAGCAATAGTATGTTANGNTNNGCGGGGGTNGAAGACCAACGGAC
AATNGGGGGTANGGAAAATTTTGGATTTTTCCGGGGTAATGGGGAATTTNNNCNGAAANT
TTTTCCTACCAAGNTTTTNGGTGGGAAAAANNGNNCAGCATAGGGAAGGGGTAGGNTTTT
NGTTAAGAAATGGGAGGGTGGGCCTGGNGGGGAGTTCNTNGGNGGGGGCCCTTAATGGGG
GCGGCCCGCGCCGGTGGAGGCGGCCTTCCGAGGTCCTTCGCACACTATCTGACATCCGAT
CTAACGATCAGATTCTCTCCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGT
CATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGC
AAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAA
GAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTG
TCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCA
CGTTGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13557#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 639
fasta sequence

                              [CGCAAGGAAGAAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CK085267             [CGCAAGGAAGAAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGGAGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCC                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU066222             [           ccgGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTNCTNACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTNGTGGGGGAGGTCCTNGTGGTGGC                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OS1321863            [                        GGGCGATCCCGGGGGCNCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAG ATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTNGGGGAGGTCCTGGTGGTNGCCCTTATGGGG                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA999622             [                                    GGGCGCGACCATGGCTTACGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAACAGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU076099             [                                                                                                                                                                                                                                                                                     GGTGGAGGCGGCCTCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13557#2
CGCAAGGAAGAAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTACGTCGA
GAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGACTTCTT
CAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGAAAAAAC
AGACAGCTATAGGAAAGGGTATGGCTCTGGTAAGAAATGGGATGGTGGGCCTGGTGGGGG
AGGTCCTGGTGGTGGCCCTTATGGGGGCGGCCGCGGCGGTGGAGGCGGCCTCCGAGGTCC
TCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTG
CTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCC
TTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATC
TTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAG
ATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCA
ACTTGTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13557#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 407
fasta sequence

                              [CCCCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTTGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCATCTGTTCACTTGTAATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAAAAAAAAAAAAAA]

[+] EMBL CA765742             [CCCCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGCTTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACGACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGAACGTATATAATCTTTGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTTCTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGCACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCATCTGTTCACTTGTAATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAAAAAAAAAAAAAA]




>consensus_13557#3
CCCCCGAGGTCCTCGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGC
TTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACG
ACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGA
ACGTATATAATCTTTGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTT
CTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGC
ACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCATCTGTTCACTTGTA
ATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13557#0      CCTTCTCCCTTCGGTTTCCCCTTCTTAATTCTTCTCGCCTCGAGCGAAAATCTTATCATT 60
consensus_13557#2      ------------------------------------------------------------
consensus_13557#3      ------------------------------------------------------------
consensus_13557#1      ------------------------------------------------------------
                                                                                   

consensus_13557#0      GTAGTTCTTTCCATCGCAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTA 120
consensus_13557#2      ------CGCAAGGAAGAAGAGGGTGGGCTAGGGCGATCCGGGGGGCGCGACCATGGCTTA 54
consensus_13557#3      ------------------------------------------------------------
consensus_13557#1      ---------------------------TTNGGATGAGCATAACAGCAATAGTATG--TTA 31
                                                                                   

consensus_13557#0      CGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGA 180
consensus_13557#2      CGTCGAGAGAGGTGTTGTGAAAGACAAACGGACAATTTGGCGGCTAAGCATAATTTCTGA 114
consensus_13557#3      ------------------------------------------------------------
consensus_13557#1      NGNTNNGCGGGG----GTNGAAGACCAACGGACAATNGGGGG--TANGGAAAATTTTGGA 85
                                                                                   

consensus_13557#0      CTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGA 240
consensus_13557#2      CTTCTTCAGGGCTATTGTGAACTTCATCAGAATGTTCTTCCTTACAATGTTCTCGATTGA 174
consensus_13557#3      ------------------------------------------------------------
consensus_13557#1      TTTTTCCGGGGTAATGGGGAATTTNNNCNGAAANTTTTTCCTACCAAGNTTTTNGGTGGG 145
                                                                                   

consensus_13557#0      AAAAACAGACAGCTATAGGAAAGGG-TATGGCTCTGGT-AAGAAATGGGATGGTGGGCCT 298
consensus_13557#2      AAAAACAGACAGCTATAGGAAAGGG-TATGGCTCTGGT-AAGAAATGGGATGGTGGGCCT 232
consensus_13557#3      ------------------------------------------------------------
consensus_13557#1      AAAAANNGNNCAGCATAGGGAAGGGGTAGGNTTTTNGTTAAGAAATGGGAGGGTGGGCCT 205
                                                                                   

consensus_13557#0      GGTGGGGGAGGTCCTGGTGGTGGCCCTTA-TGGGGGCGGCC-GCGGCGGTGGAGGCGGCC 356
consensus_13557#2      GGTGGGGGAGGTCCTGGTGGTGGCCCTTA-TGGGGGCGGCC-GCGGCGGTGGAGGCGGCC 290
consensus_13557#3      ----------------------------------------------------------CC 2
consensus_13557#1      GGNGGGGAGTTCNTNGGNGGGGGCCCTTAATGGGGGCGGCCCGCGCCGGTGGAGGCGGCC 265
                                                                                 **

consensus_13557#0      T-CCGAGGTCCT-CGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGC 414
consensus_13557#2      T-CCGAGGTCCT-CGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGC 348
consensus_13557#3      C-CCGAGGTCCT-CGCACACTATCTGACATCCGATCTAACGATCAGAATTCTCTCCCTGC 60
consensus_13557#1      TTCCGAGGTCCTTCGCACACTATCTGACATCCGATCTAACGATCAGATTCTCTCCCCTGC 325
                         ********** ********************************** *     ******

consensus_13557#0      TTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACG 474
consensus_13557#2      TTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACG 408
consensus_13557#3      TTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACG 120
consensus_13557#1      TTGTGGATCCTGCTGCGGTTAACCTGTACATCTGTCATTGTGACTGCTGAACTATGAACG 385
                       ************************************************************

consensus_13557#0      ACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGA 534
consensus_13557#2      ACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGA 468
consensus_13557#3      ACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGA 180
consensus_13557#1      ACTCTAAGATCCTTTTGATGTCATTTTTTAGGAGCAAGTCTGAATTCTGAAAATTTTAGA 445
                       ************************************************************

consensus_13557#0      ACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTT 594
consensus_13557#2      ACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTT 528
consensus_13557#3      ACGTATATAATCTTTGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTT 240
consensus_13557#1      ACGTATATAATCTTCGCTGGTTAAGCAGGATATAAGAACACTTGTTACATGTTACATCTT 505
                       ************** *********************************************

consensus_13557#0      CTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGC 654
consensus_13557#2      CTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGC 588
consensus_13557#3      CTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGC 300
consensus_13557#1      CTGCTTAGAAAGATCATCTATGCATTGTGACATTGTCAAAACACGAGTGTAATACCCAGC 565
                       ************************************************************

consensus_13557#0      ACATATTATGCAACTTGTTTCTGACGTGAAAAAAAAGTTGCCTTCATCTGTTCACTTGTA 714
consensus_13557#2      ACATATTATGCAACTTGTTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------- 639
consensus_13557#3      ACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCATCTGTTCACTTGTA 360
consensus_13557#1      ACATATTATGCAACTTGTTTCTGACGTGATCTCCACGTTGCCTTCAAAAAAAAAAAAAAA 625
                       ********************** *    *     *          *              

consensus_13557#0      ATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAGATGTGTCCTTCAATGGACCTGCCCA 774
consensus_13557#2      ------------------------------------------------------------
consensus_13557#3      ATTGTGAGTTTATGCATGTTTTTAGTCAGTTAAAAAAAAAAAAAAAA------------- 407
consensus_13557#1      AAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 685
                                                                                   

consensus_13557#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 817
consensus_13557#2      -------------------------------------------
consensus_13557#3      -------------------------------------------
consensus_13557#1      AAA---------------------------------------- 688