cluster # 13654

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Oryza sativa
cluster # 13654 cluster # 13654 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13654#0 length = 1356 sequences # 8
consensus_13654#1 length = 483 sequences # 1

consensus_13654#2 length = 477 sequences # 3
consensus_13654#3 length = 392 sequences # 1

consensusID : consensus_13654#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1356
fasta sequence

                              [AGTCGAGTCGATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCG-GCGGCGG-GCAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGT-ACGAGGGCGACCTCCTCAAGCTCCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCAC-TGCTTTCTAT----CTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGAC-TTCGAGTTCCTGGGCAACGTCACCGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGTCGGC-AACCGGGAGCAGCGCATCGACCTGTGGTTCGACCCCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAACCCCAGCCAGGTCGTCTTCCTCGTCGACGACACCCCCATCCGCGTCTACGAGAACAAGAA-CGCCACCGCCGCCGTCAAGGGCCACCACCGCCACGCCGCCGCCGCCAATGGCACCAGCAACGCCACATCGGCGGCGGCGTCCGTGCCGCCGTTCCCGTCGCCGCAGCCGATGTCGGTGTACAGCTCCATCTGGAACGCGGACGACTGGGCGACGCAGGGCGGGCGGGTGAAGACGGACTGGTCGCACGCGCCGTTCGTGGCCACGTTCCGCGACGTCCGCGTCGAGGGTTGCGCGTGGGCGGCGAACGCCACGGACTCGGACGCCGGCGAGGTGGCGCGGTGCACGGGGAGCTCGTGGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGG-ACATGGAGGAGCTCA-CCGTGCACCAGAA--CCACCAGCT-CGTGTGGGCGCGC-GCGCACCA-CCTCGTCTACGACTACTGCG-TCGACACCG-ACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTA-GGATGGATCG-ATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAG-ATGAACTTAGGTGATGGTAGTTCATC-GTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTTCTTCAGTCTTCCGATCTGGACGATGCTCACTTTTAACTTCAAATCGAAATGCAAATGCCCAATGCCATCATTCATTCAAAAAATCCTCCTNACGGTGAAAAATCAATGAATGCCATCTGAAAGATNACTGATGTATTGATGGCTTTAATTCAAAAA]

[+] EMBL AK059277             [AGTCGAGTCGATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCG GCGGCGG GCAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGT ACGAGGGCGACCTCCTCAAGCTCCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCAC TGCTTTCTATGTGACTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGAC TTCGAGTTCCTGGGCAACGTCACCGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGTCGGC AACCGGGAGCAGCGCATCGACCTGTGGTTCGACCCCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAACCCCAGCCAGGTCGTCTTCCTCGTCGACGACACCCCCATCCGCGTCTACGAGAACAAGAA CGCCACCGCCGCCGTCAAGGGCCACCACCGCCACGCCGCCGCCGCCAATGGCACCAGCAACGCCACATCGGCGGCGGCGTCCGTGCCGCCGTTCCCGTCGCCGCAGCCGATGTCGGTGTACAGCTCCATCTGGAACGCGGACGACTGGGCGACGCAGGGCGGGCGGGTGAAGACGGACTGGTCGCACGCGCCGTTCGTGGCCACGTTCCGCGACGTCCGCGTCGAGGGTTGCGCGTGGGCGGCGAACGCCACGGACTCGGACGCCGGCGAGGTGGCGCGGTGCACGGGGAGCTCGTGGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGG ACATGGAGGAGCTCA CCGTGCACCAGAA  CCACCAGCT CGTGTGGGCGCGC GCGCACCA CCTCGTCTACGACTACTGCG TCGACACCG ACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTA GGATGGATCG ATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAG ATGAACTTAGGTGATGGTAGTTCATC GTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTTCTTCAGTCTTCCGATCTGGACGATGCTCACTTTTAACTTCAAATCGAAATGCAAAT                                                                                                    ]
[+] EMBL AK099331             [AGTCGAGTCGATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCG GCGGCGG GCAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGT ACGAGGGCGACCTCCTCAAGCTCCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCAC TGCTTTCTAT    CTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGAC TTCGAGTTCCTGGGCAACGTCACCGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGTCGGC AACCGGGAGCAGCGCATCGACCTGTGGTTCGACCCCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAACCCCAGCCAGGTCGTCTTCCTCGTCGACGACACCCCCATCCGCGTCTACGAGAACAAGAA CGCCACCGCCGCCGTCAAGGGCCACCACCGCCACGCCGCCGCCGCCAATGGCACCAGCAACGCCACATCGGCGGCGGCGTCCGTGCCGCCGTTCCCGTCGCCGCAGCCGATGTCGGTGTACAGCTCCATCTGGAACGCGGACGACTGGGCGACGCAGGGCGGGCGGGTGAAGACGGACTGGTCGCACGCGCCGTTCGTGGCCACGTTCCGCGACGTCCGCGTCGAGGGTTGCGCGTGGGCGGCGAACGCCACGGACTCGGACGCCGGCGAGGTGGCGCGGTGCACGGGGAGCTCGTGGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGG ACATGGAGGAGCTCA CCGTGCACCAGAA  CCACCAGCT CGTGTGGGCGCGC GCGCACCA CCTCGTCTACGACTACTGCG TCGACACCG ACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTA GGATGGATCG ATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAG ATGAACTTAGGTGATGGTAGTTCATC GTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCT                                                                                                                                                                                ]
[+] EMBL AU166082             [          ATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGC  GCGCGGG GCAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGT ACGAGGGCGACCTCCTCAAGCTCCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU062552             [          ATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCGNGCGG TG ACAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGNCCACGTNGTGTAACNAGGGCGACCTCCTNAAGCTACGNCTAGACAGCTCGTCNGGCGGCGGGTTCGNGTCGAAGAGCAAGTTCCTGTACGGNAAGGNGACCGACGACCTGAAGCTCGTGGAGGGGGATTCCGCCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C91679               [                 AGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGTGGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCG G GNCGGNGCAAGTTCGACGACGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGT ACGAGGGCGACCTCCTCAAGCTCCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGACCTGAAGTTCGTGGCGGGGGATTCCGCCGGAGTTGTCACTTGCTTTCTAT    CTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGACTTTCGAGTTCCTGGGCAACGTCACCGGCGAGCCGTACCTNGTGCAGACCAACCTGTACATCGACGGCGTTGGCAAACCGGGAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C27146               [                                                                                                                                                                                       ctcntaCGACAGCTCGTCCGGCGCCGGGTTCGCGTNGAAGAGCAAGTTCCTGTACGGCAAGGCGACCGCCGTCCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCAC TGCTTTCTAT    CTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGAC TTCGAGTTCCTGGGCAACGTCACCGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGT GGC AACCGGGAGCAGCGCATCGACCTGTGGTTCGACCNCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAACCCCAGCCAGGTCGTCTTCCTCGTCGACG CAACNCCATNCGCGTTTACGAGAACAAGAACCGTCAACGCCGCCGTTAAGGGCCACCAACGGCAAGGNGCCG CGGCAATn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU181355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGGNGGAAGGAAAAGGNACATGGAGGAGCTCACCCGTGCACCANAAACCCACCAGCTNGGTGTGGGCGCGCGGCGCACCACCCTCGTNT CGACTACTGNGTTGGACACCGAACCGCTTCCCCGTCCANCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGGATGGATCGAATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAGAATGAACTTAGGTGATGGTAGTTCATCGGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTTCTTCAGTCTTCCGATCTGGACGATGCTCACTTTTAACTTCAAATCGAAATGCAAATGCCCAATGCCATCATTCATTCAAAAAA                                                                         ]
[+] EMBL AU108778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGTTTATCTCAG ATGAACTTAGGTGNTGGTAGTTCATC GTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTTCTTCAGTCTTCCGATCTGGACGATGCTCACTTTTAACTTCAAATCGAAATGCAAATGCCCAATGCCATCATTCATTCATTTGGTCCTCCTNACGGTGAAAAATCAATGAATGCCATCTGAAAGATNACTGATGTATTGATGGCTTTAATTCAAAAA]




>consensus_13654#0
AGTCGAGTCGATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGT
GGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCGGCGGCGGGCAAGTTCGACGA
CGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGTACGAGGGCGACCTCCTCAAGCT
CCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAA
GGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCACTGCTTTCTA
TCTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGACTTCGAGTTCCTGGGCAACGTCAC
CGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGTCGGCAACCGGGAGCA
GCGCATCGACCTGTGGTTCGACCCCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAA
CCCCAGCCAGGTCGTCTTCCTCGTCGACGACACCCCCATCCGCGTCTACGAGAACAAGAA
CGCCACCGCCGCCGTCAAGGGCCACCACCGCCACGCCGCCGCCGCCAATGGCACCAGCAA
CGCCACATCGGCGGCGGCGTCCGTGCCGCCGTTCCCGTCGCCGCAGCCGATGTCGGTGTA
CAGCTCCATCTGGAACGCGGACGACTGGGCGACGCAGGGCGGGCGGGTGAAGACGGACTG
GTCGCACGCGCCGTTCGTGGCCACGTTCCGCGACGTCCGCGTCGAGGGTTGCGCGTGGGC
GGCGAACGCCACGGACTCGGACGCCGGCGAGGTGGCGCGGTGCACGGGGAGCTCGTGGGG
CAAGGAGGGGAGGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCGTGCACCAGAA
CCACCAGCTCGTGTGGGCGCGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGA
CCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGT
TAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAG
GTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTGTGG
GGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTT
CTTCAGTCTTCCGATCTGGACGATGCTCACTTTTAACTTCAAATCGAAATGCAAATGCCC
AATGCCATCATTCATTCAAAAAATCCTCCTNACGGTGAAAAATCAATGAATGCCATCTGA
AAGATNACTGATGTATTGATGGCTTTAATTCAAAAA

consensusID : consensus_13654#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence

                              [GCACGCCCCGTTCGTGGCCACGTTCCGCGTACGTCCGCNTCGATGGGGTGCGCGTGGTCGGCGAACTCCACGGACTCGGACGCCGGCGAGTGTGGCATCGGTGCACGGGGAGCTCGTGGGGCAAGGAGGGGAGTGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCAGTGCACCAGAGCCACCAGCTCGTGTGGGCGCAGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGTGATGTAGTTCATCGTAATTCTGTGTCTCTTGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTCTGTTCTGCTGCTGCTCAAAAAAAAAA]

[+] EMBL BI806302             [GCACGCCCCGTTCGTGGCCACGTTCCGCGTACGTCCGCNTCGATGGGGTGCGCGTGGTCGGCGAACTCCACGGACTCGGACGCCGGCGAGTGTGGCATCGGTGCACGGGGAGCTCGTGGGGCAAGGAGGGGAGTGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCAGTGCACCAGAGCCACCAGCTCGTGTGGGCGCAGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGTGATGTAGTTCATCGTAATTCTGTGTCTCTTGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTCTGTTCTGCTGCTGCTCAAAAAAAAAA]




>consensus_13654#1
GCACGCCCCGTTCGTGGCCACGTTCCGCGTACGTCCGCNTCGATGGGGTGCGCGTGGTCG
GCGAACTCCACGGACTCGGACGCCGGCGAGTGTGGCATCGGTGCACGGGGAGCTCGTGGG
GCAAGGAGGGGAGTGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCAGTGCACCA
GAGCCACCAGCTCGTGTGGGCGCAGCGCGCACCACCTCGTCTACGACTACTGCGTCGACA
CCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGC
CGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACAAATCAAATGG
CAGGTAGTTTATCTCAGATGAACTTAGTGATGTAGTTCATCGTAATTCTGTGTCTCTTGG
GGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTCTGTTCTGCTGCTGCTCAAAAAAA
AAA

consensusID : consensus_13654#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 477
fasta sequence

                              [TCGCACGCGCCGTTCTTGGCCACTTCCCGCGACTTCCGCCTTNCGAAGGGTTGCGCGTGGGCGGCGAACGCCACGGACTCCGGACGCCGGCGAGNTGGCGCGNTGCCACGGGGAGCTCGTGGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCGTGCACCAGAACCACCAGCTCGTGTGGGCGCGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCAAAAAAAAAAAAAA]

[+] EMBL AU029605             [TCGCACGCGCCGTTCTTGGCCACTTCCCGCGACTTCCGCCTTNCGAAGGGTTGCGCGTGGGCGGCGAACGCCACGGACTCCGGACGCCGGCGAGNTGGCGCGNTGCCACGGGGAGCTCGTGGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCGTGCACCAGAACCACCAGCTCGTGTGGGCGCGCGCGCACCACCTC TCTACGACTA TGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCAAAAAAAAAAA   ]
[+] EMBL AU101403             [                                                                                                                                                              ATGGAGGAGCTCACCGTGCACCAGAACCACCAGCTCGTGTGGGCGCGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCA    AAAAAAAAAAAAAA]
[+] EMBL C74175               [                                                                                                                                                               TGGAGGAGCTCACCGTGCACCAGAACCACCAGCTCGTGTGGGCGCGCGCGCACCACCTCGTCTACGACTACTGCGTCGACACCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATGGCAGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTNCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACTCGG                        ]




>consensus_13654#2
TCGCACGCGCCGTTCTTGGCCACTTCCCGCGACTTCCGCCTTNCGAAGGGTTGCGCGTGG
GCGGCGAACGCCACGGACTCCGGACGCCGGCGAGNTGGCGCGNTGCCACGGGGAGCTCGT
GGGGCAAGGAGGGGAGGTACTGGTGGAAGGAGAAGGACATGGAGGAGCTCACCGTGCACC
AGAACCACCAGCTCGTGTGGGCGCGCGCGCACCACCTCGTCTACGACTACTGCGTCGACA
CCGACCGCTTCCCCGTCCAGCCGCCGGAGTGCGCCGGACGGTGACCGTCGATCTCGTCGC
CGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTAGCAAATCAAATG
GCAGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCT
GTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCACTGCAAAAAAAAAAAAAA

consensusID : consensus_13654#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 392
fasta sequence

                              [GGTGGCCGCGGTTGCACCGGGGATCCTCCGTGGGCCCAAGGAGGGGAGTTACCTGGTGGANGNGATGAAGGNCCACTGGAGGAGCCTCACCCGTGCACCCATGAGCCACCCAGCTTCGTTGTGGGGCGCTGCGCGCACCCACCCTTGTTTACGACCTATCTGCGTCGACACCCGACCGCTTCCCCGTCCCGCCGCCCGGAGTGCCCCGGACGGTGCCCGTCGATTTNNGTCCCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACCCAATCCAATGGCACGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCC]

[+] EMBL BI806001             [GGTGGCCGCGGTTGCACCGGGGATCCTCCGTGGGCCCAAGGAGGGGAGTTACCTGGTGGANGNGATGAAGGNCCACTGGAGGAGCCTCACCCGTGCACCCATGAGCCACCCAGCTTCGTTGTGGGGCGCTGCGCGCACCCACCCTTGTTTACGACCTATCTGCGTCGACACCCGACCGCTTCCCCGTCCCGCCGCCCGGAGTGCCCCGGACGGTGCCCGTCGATTTNNGTCCCCGGTTAGGATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACCCAATCCAATGGCACGGTAGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTTGGGGGTGTATCTGTAAAAAATTGTTACTCGGCTTCCC]




>consensus_13654#3
GGTGGCCGCGGTTGCACCGGGGATCCTCCGTGGGCCCAAGGAGGGGAGTTACCTGGTGGA
NGNGATGAAGGNCCACTGGAGGAGCCTCACCCGTGCACCCATGAGCCACCCAGCTTCGTT
GTGGGGCGCTGCGCGCACCCACCCTTGTTTACGACCTATCTGCGTCGACACCCGACCGCT
TCCCCGTCCCGCCGCCCGGAGTGCCCCGGACGGTGCCCGTCGATTTNNGTCCCCGGTTAG
GATGGATCGATGGATGGAACTGCTGGTTTCTTTCTTGGTTACCCAATCCAATGGCACGGT
AGTTTATCTCAGATGAACTTAGGTGATGGTAGTTCATCGTAATTCTGTGTCTCTTGGGGG
TGTATCTGTAAAAAATTGTTACTCGGCTTCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13654#0      AGTCGAGTCGATCGAACAGCACAGCAAGTGAGCAGTGACAATGGCGTCTCTGGCCGTCGT 60
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      GGTGGTGGTGGTGGCGGTGGTGTGCGCCGCCGGTGTGGCGGCGGCGGGCAAGTTCGACGA 120
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CGTGGTGGAGCCGAGCTGGGCCAACGACCACGTCGTGTACGAGGGCGACCTCCTCAAGCT 180
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CCGCCTCGACAGCTCGTCCGGCGGCGGGTTCGCGTCGAAGAGCAAGTTCCTGTACGGCAA 240
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      GGCGACCGCCGACCTGAAGCTCGTGGCGGGGGATTCCGCCGGAGTTGTCACTGCTTTCTA 300
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      TCTGTCGTCCGGCGGGGACAAGCACAACGAGTTCGACTTCGAGTTCCTGGGCAACGTCAC 360
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CGGCGAGCCGTACCTGGTGCAGACCAACCTGTACATCGACGGCGTCGGCAACCGGGAGCA 420
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      GCGCATCGACCTGTGGTTCGACCCCACCGCCGACTTCCACACCTACGCCGTGCTCTGGAA 480
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CCCCAGCCAGGTCGTCTTCCTCGTCGACGACACCCCCATCCGCGTCTACGAGAACAAGAA 540
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CGCCACCGCCGCCGTCAAGGGCCACCACCGCCACGCCGCCGCCGCCAATGGCACCAGCAA 600
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CGCCACATCGGCGGCGGCGTCCGTGCCGCCGTTCCCGTCGCCGCAGCCGATGTCGGTGTA 660
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      CAGCTCCATCTGGAACGCGGACGACTGGGCGACGCAGGGCGGGCGGGTGAAGACGGACTG 720
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      GTCGCACGCGCCGTTCGTGGCCACGTTCCGCG-ACGTCCGCGT--CGA-GGGTTGCGCGT 776
consensus_13654#1      ---GCACGCCCCGTTCGTGGCCACGTTCCGCGTACGTCCGCNT--CGATGGGGTGCGCGT 55
consensus_13654#2      -TCGCACGCGCCGTTCTTGGCCACTTCCCGCG-ACTTCCGCCTTNCGAAGGGTTGCGCGT 58
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      GGGCGGCGAACGCCACGGACTC-GGACGCCGGCGAG-GTGGCG-CGGT-GC-ACGGGGAG 831
consensus_13654#1      GGTCGGCGAACTCCACGGACTC-GGACGCCGGCGAGTGTGGCATCGGT-GC-ACGGGGAG 112
consensus_13654#2      GGGCGGCGAACGCCACGGACTCCGGACGCCGGCGAG-NTGGCG-CGNT-GCCACGGGGAG 115
consensus_13654#3      ------------------------------------GGTGGCCGCGGTTGCACCGGGGAT 24
                                                             ****  ** * **  ****** 

consensus_13654#0      CT--CGTGGGGC-AAGGAGGGGAG-GTACTGGTGGAAGGA--GAAGGACA--TGGAGGAG 883
consensus_13654#1      CT--CGTGGGGC-AAGGAGGGGAGTGTACTGGTGGAAGGA--GAAGGACA--TGGAGGAG 165
consensus_13654#2      CT--CGTGGGGC-AAGGAGGGGAG-GTACTGGTGGAAGGA--GAAGGACA--TGGAGGAG 167
consensus_13654#3      CCTCCGTGGGCCCAAGGAGGGGAGTTACCTGGTGGANGNGATGAAGGNCCACTGGAGGAG 84
                       *   ****** * ***********    ******** *    ***** *   ********

consensus_13654#0      C-TCACC-GTGCACCA--GAACCACC-AGCTCG--TGTGGG-CGC-GCGCGCACCA--CC 932
consensus_13654#1      C-TCACCAGTGCACCA--GAGCCACC-AGCTCG--TGTGGG-CGCAGCGCGCACCA--CC 216
consensus_13654#2      C-TCACC-GTGCACCA--GAACCACC-AGCTCG--TGTGGG-CGC-GCGCGCACCA--CC 216
consensus_13654#3      CCTCACCCGTGCACCCATGAGCCACCCAGCTTCGTTGTGGGGCGCTGCGCGCACCCACCC 144
                       * ***** *******   ** ***** ****    ****** *** *********   **

consensus_13654#0      TCGTCTACGACTA--CTGCGTCGACACC-GACCGCTTCCCCGTCCAGCCGCC-GGAGTGC 988
consensus_13654#1      TCGTCTACGACTA--CTGCGTCGACACC-GACCGCTTCCCCGTCCAGCCGCC-GGAGTGC 272
consensus_13654#2      TCGTCTACGACTA--CTGCGTCGACACC-GACCGCTTCCCCGTCCAGCCGCC-GGAGTGC 272
consensus_13654#3      TTGTTTACGACCTATCTGCGTCGACACCCGACCGCTTCCCCGTCCCGCCGCCCGGAGTGC 204
                       * ** ******    ************* **************** ****** *******

consensus_13654#0      GCCGGACGGTGACCGTCGATCTCG-TCGCCGGTTAGGATGGATCGATGGATGGAACTGCT 1047
consensus_13654#1      GCCGGACGGTGACCGTCGATCTCG-TCGCCGGTTAGGATGGATCGATGGATGGAACTGCT 331
consensus_13654#2      GCCGGACGGTGACCGTCGATCTCG-TCGCCGGTTAGGATGGATCGATGGATGGAACTGCT 331
consensus_13654#3      CCCGGACGGTGCCCGTCGATTTNNGTCCCCGGTTAGGATGGATCGATGGATGGAACTGCT 264
                        ********** ******** *   ** ********************************

consensus_13654#0      GGTTTCTTTCTTGGTTAGCAAATCAAATGGCA-GGTAGTTTATCTCAGATGAACTTAGGT 1106
consensus_13654#1      GGTTTCTTTCTTGGTTA-CAAATCAAATGGCA-GGTAGTTTATCTCAGATGAACTTAG-T 388
consensus_13654#2      GGTTTCTTTCTTGGTTAGCAAATCAAATGGCA-GGTAGTTTATCTCAGATGAACTTAGGT 390
consensus_13654#3      GGTTTCTTTCTTGGTTACCCAATCCAATGGCACGGTAGTTTATCTCAGATGAACTTAGGT 324
                       ***************** * **** ******* ************************* *

consensus_13654#0      GATGGTAGTTCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACT 1166
consensus_13654#1      GATG-TAGTTCATCGTAATTCTGTGTCTCTT--GGGGTGTATCTGTAAAAAATTGTTACT 445
consensus_13654#2      GATGGTAGTTCATCGTAATTCTGTGTCTCTGTGGGGGTGTATCTGTAAAAAATTGTTACT 450
consensus_13654#3      GATGGTAGTTCATCGTAATTCTGTGTCTCTT-GGGGGTGTATCTGTAAAAAATTGTTACT 383
                       **** *************************   ***************************

consensus_13654#0      CGGCTTCCACTGCTGTTCTGCTGCTGCTGCATTTCTTCAGTCTTCCGATCTGGACGATGC 1226
consensus_13654#1      CGGCTTCCACT-CTGTTCTGCTGCTGCTCAAAAAAAAAA--------------------- 483
consensus_13654#2      CGGCTTCCACT-----------GCAAAAAAAAAAAAAA---------------------- 477
consensus_13654#3      CGGCTTCCC--------------------------------------------------- 392
                       ********                                                    

consensus_13654#0      TCACTTTTAACTTCAAATCGAAATGCAAATGCCCAATGCCATCATTCATTCAAAAAATCC 1286
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      TCCTNACGGTGAAAAATCAATGAATGCCATCTGAAAGATNACTGATGTATTGATGGCTTT 1346
consensus_13654#1      ------------------------------------------------------------
consensus_13654#2      ------------------------------------------------------------
consensus_13654#3      ------------------------------------------------------------
                                                                                   

consensus_13654#0      AATTCAAAAA 1356
consensus_13654#1      ----------
consensus_13654#2      ----------
consensus_13654#3      ----------