cluster # 13677

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Oryza sativa
cluster # 13677 cluster # 13677 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13677#0 length = 2387 sequences # 12

consensus_13677#1 length = 605 sequences # 1

consensusID : consensus_13677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2387
fasta sequence

                              [TCAAAAACCCTAGCCGCCACTCCGCCATTTCGGTAAGGTTTGCTGCGACTCCGCCGCGACGCATCTTGCGCCGCCAGCCGCCGCCGCCGCGCGCCTCCTCCCCCGTCGACCTCGGCTGACGCGCGGCGCCCTCGAGCTCGCGTCGCGTCGCGTCGTGTCCCTCTCGTTGATGGAGGCTCCGGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACTCCGCGGGTGGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTCTATGGAGCCTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAGACACCAACTGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCAACTTCAGGACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATACAACAAACAACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCTGCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCAAATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACAACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTAC-TGTTGCACCTGTGAAGGGACAAGAGCTTTCAG-CCAGCG-ATAGCTCGC-TTTCTGTCATGAAGGATCAGTATAACCGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGATGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGTAATAAAAGGCTTGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTGTTCCTTCTTTTCTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGCCGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAAGGT-CGTTGATG-AGAAGCTGCTTAATGCTGTGGA-CACTGAGAACAGCTTGTTAACTGTGAAATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGCCCGTTTCT-GTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAA-ACGAGAAGTTGGCCA-GTTTGAGCGTCTGTTAA-GTTTTTTCTCATCATTTCAGC-CATTGA-GGGGTGGTGTAAGGTGAAGGGCTATATA-GGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGT-GAGTTTCTCCGTTGCT-TTTGGTTAGGACTT-GGAGG-TGGT-TTCATAGGAGAG-CTA-GAAGTTTAGCTGAT-TGT-GTCTGGTGAGATGTGCGGATA-GCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAGC-TTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGT-CAAGAGTGTTTAAACCTGGGAATTCAATTAAGAAATTTACTCTTTTGTTCCAAAAAAAATTTTCTGA]

[+] EMBL AK072392             [TCAAAAACCCTAGCCGCCACTCCGCCATTTCGGTAAGGTTTGCTGCGACTCCGCCGCGACGCATCTTGCGCCGCCAGCCGCCGCCGCCGCGCGCCTCCTCCCCCGTCGACCTCGGCTGACGCGCGGCGCCCTCGAGCTCGCGTCGCGTCGCGTCGTGTCCCTCTCGTTGATGGAGGCTCCGGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACTCCGCGGGTGGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTCTATGGAGCCTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAGACACCAACTGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCAACTTCAGGACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATACAACAAACAACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCTGCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCAAATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACAACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTAC TGTTGCACCTGTGAAGGGACAAGAGCTTTCAG CCAGCG ATAGCTCGC TTTCTGTCATGAAGGATCAGTATAACCGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGATGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGTAATAAAAGGCTTGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTGTTCCTTCTTTTCTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGCCGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAAGGT CGTTGATG AGAAGCTGCTTAATGCTGTGGA CACTGAGAACAGCTTGTTAACTGTGAAATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGGTAAAGCAGGACGAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCT GTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAA ACGAGAAGTTGGCCA GTTTGAGCGTCTGTTAA GTTTTTTCTCATCATTTCAGC CATTGA GGGGTGGTGTAAGGTGAAGGGCTATATA GGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGT GAGTTTCTCCGTTGCT TTTGGTTAGGACTT GGAGG TGGT TTCATAGGAGAG CTA GAAGTTTAGCTGAT TGT GTCTGGTGAGATGTGCGGATA GCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAGC TTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGT CAAGAGTGTTTAAACCTGGGAATTCAATTAAGAAATTTACTCTTTTGTTCCAATGCTTATTTTCTGA]
[+] EMBL CF323249             [                                                                                                                                                                      TTGATGGAGGCTCCGGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACTCCGCGGGTGGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTCTATGGAGCCTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAGACACCAACTGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCAACTTCAGGACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATACAACAAACAACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCTGCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF324151             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAATCCGGCTGCACTGCCCCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCTGCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGGGCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCAAATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACAACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATTG ACGGNGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C26039               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGGCAATCGTTCTCTGACAACTTCCAATTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTAC TGTTGCACCTGTGAAGGGACAAGAGCTTTCAG CCAGCG AT NTTCGCTTTTCTGTCATGAAGGATCAGTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF323100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCAGACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTAC TGTTGCACCTGTGAAGGGACAAGAGCTTTCAG CCAGCG ATAGCTCGC TTTCTGTCATGAAGGATCAGTATAACCGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGATGTTCACAAGAGCATTAAGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU063773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATGTATGGNTACAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGTTCACACCTGTNTGGTTCTGGNTTGTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGTTCCTATGGTTATATCCATGGAAATCAGGATGGNTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTNCAATAACCAACAGGGAGTTGGAGCTAC TNTTGCACCTNTAAAGGGACAAGAGCTTTCAGCCCAGCGAATA NTCGC TTTCTGTCATGANGGATCAGTATAACCGGGCTGATTTTTTGGGAACATACTCAGATGCTAAATTNTTCATCATCAAATCATncc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA305858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGGATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAGAAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTACNTGTTGCACCTGTGAAGGGACAAGAGCTTTCAG CCAGCG ATAGCTCGC TTTCTGTCATGAAGGATCAGTATAACCGGGCTGATTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGATGTTCACAAGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BE040211             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tTTGAAACCAAT AGAAC AACCAGTCCCCAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTCCAAGTGCTTAAGA TTTCAAGGACCATGTCTGCAAGACGTCGTACCTGGATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAAGGT CGTTGATG AGAAGCTGCTTAATGCTGTGGA CACTGAGAACAGCTTGTTAACTGTGAAATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCT GTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAA ACGAGAAGTTGGCCA GTTTGAGCGTCTGTTAA GTTTTTTCTCATCATTTCAGC CATTGA GGGGTGGTGTAAGGTGAAGGGCTATATA GGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGT GAGTTTCTCCGTTGCT TTTGGTTAGGACTT GGAGG TGGT TTCATAGGAGAG CTA GAAGTTTAGCTGAT TGT GTCTGGTGAGATGTGCGGATA GCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAGC TTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGT CAAGAGTGTTTAAACCTGGGAATTCAATTA                                     ]
[+] EMBL AU092251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAC ACTGAAAAAGGTCCNTTGATGAAAAACCTCCTTAATCCTGTGGACCACTGAGAACANCTTGTTAACTGTGAAATCCAAATNGCAGGAACCAGCTGAGTTAGAGATTGATGTCTTAAACAAAGANCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGCCCGTTNCT GTAAATGGTGTTNCCCCAGAAGATGTTCAGTTGACAA ACGAGAAGTTGGCCA GTTTGANCGTCTGTTAA GTTTTTTCTCATCATTTCAGC CATTGA GGGGTGGTGTAAGGTGAAGGGCTATATA GGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGT GAGTTTCNCCGTTGCT TTTGGTTAGGACTT GGAGG TGGT TTCATAGGAGAG CTA GAAGTTTAGCTGAT TGT GTCTGGTGAGATGTGCGGATA GCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAGC TTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGT CAAGAGTGTTTAAACCTGGGAATTCAATTAAGAAATTTACTCTTTTGTTCCAAAAAAAA        ]
[-] EMBL CB636650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGCCCGTTTCT GTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAA ACGAGAAGTTGGCCA GTTTGAGCGTCTGTTAA GTTTTTTTTCATCATTTCAGC CATTGA GGGGTGGTGTAAGGTGAAGGGCTATATA GGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGT GAGTTTCTCCGTTGCT TTTGGTTAGGACTT GGAGG TGGT TTCATAGGAGAG CTA GAAGTTTAGCTGAT TGT GTCTGGTGAAATGTGCGGATA GCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATAATGGATCATTGGTTTGCCCAGTCCCTTTTCTTTTATATTGTGTTCTCTTTGGCGTTGGGCAGGGGTAGCTTTTTTTTAGTATGTTTGGGGTCTGACCCTGAAAGCATGT CAAGAGTGTTTAAACGTGGGAATTCAATTAAGAAATTAACTCT                        ]
[+] EMBL BI807658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGCCCGTTTCTGGTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAAGACGAGAACTT GCCACGTTTGAGCGTCTGTTAACGTTTTTTCTCATCATTTCAGCACATTGACGGGGTGGTGTAAGGTGAAGGGCTATATATGGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATCTGAGTTTCCTTGTGGAGTTTCTCCGTTGCTGTTTGGTTAGGACTTCGGAGGCTGGTATTCATAGGAGAGCCTACGAAGTTTAGCTGATCTGTAGTCTGGTGAGATGTGCGGATATGCAGTAGA                                                                                                                                                                                                            ]
[+] EMBL BI806088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATTTGAGTTTCCTTGT GAGTTTCTCCGTTGCT TTTGGTTAGGACTT GGAGG TGGT TTCATAGGAGAG CTA GAAGTTTAGCTGAT TGT GTCTGGTGAGATGTGCGGATA  CAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCATTGGTTTGC CAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAGC TTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGTCCAAGAGTGTTTAAACCTGGGAATTC ATTAAGAAATTTACTCTTTTGTTCCAAAAAAAAaa      ]




>consensus_13677#0
TCAAAAACCCTAGCCGCCACTCCGCCATTTCGGTAAGGTTTGCTGCGACTCCGCCGCGAC
GCATCTTGCGCCGCCAGCCGCCGCCGCCGCGCGCCTCCTCCCCCGTCGACCTCGGCTGAC
GCGCGGCGCCCTCGAGCTCGCGTCGCGTCGCGTCGTGTCCCTCTCGTTGATGGAGGCTCC
GGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACTCCGCGGGT
GGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTCTATGGAGC
CTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAGACACCAAC
TGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCAACTTCAGG
ACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATACAACAAACA
ACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCTGCACTGCC
CCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCT
GCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGG
GCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCA
AATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACAACTTCCAA
TTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCA
GACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATA
CAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATT
GTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGG
ATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAG
AAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTACTGTTGCACCTGTGAAGGGACA
AGAGCTTTCAGCCAGCGATAGCTCGCTTTCTGTCATGAAGGATCAGTATAACCGGGCTGA
TTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGA
TGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGTAATAAAAGGCT
TGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTGTTCCTTCTTTT
CTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGCCGTGTTGATTT
TAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTG
GCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGA
GAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCA
AGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTT
CTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAA
GGTCGTTGATGAGAAGCTGCTTAATGCTGTGGACACTGAGAACAGCTTGTTAACTGTGAA
ATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGG
TAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGCCCGTTTCTGTAAATGGTGT
TACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAGT
TTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATATAGGTTGGG
AAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTTGC
TTTTGGTTAGGACTTGGAGGTGGTTTCATAGGAGAGCTAGAAGTTTAGCTGATTGTGTCT
GGTGAGATGTGCGGATAGCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATCA
TTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTAG
CTTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGTCAAGAGTGTTTAAACCTGGG
AATTCAATTAAGAAATTTACTCTTTTGTTCCAAAAAAAATTTTCTGA

consensusID : consensus_13677#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 605
fasta sequence

                              [GCCGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCTGTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAGTTTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATNATAGGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTTGCTTT]

[+] EMBL CA754370             [GCCGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGGTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCTGTAAATGGTGTTACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAGTTTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATNATAGGTTGGGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTTGCTTT]




>consensus_13677#1
GCCGTGTTGATTTTAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTT
TCCCTGTAAAGTGGCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTC
TTGAAAACAATGAGAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTG
AGCCAGGGCTTCAAGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGG
ATGACTTTGATTTCTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATC
AACAACTGAAGAAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATG
GTAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCTGTAAATGGTG
TTACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAG
TTTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATNATAGGTTG
GGAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTT
GCTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13677#0      TCAAAAACCCTAGCCGCCACTCCGCCATTTCGGTAAGGTTTGCTGCGACTCCGCCGCGAC 60
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GCATCTTGCGCCGCCAGCCGCCGCCGCCGCGCGCCTCCTCCCCCGTCGACCTCGGCTGAC 120
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GCGCGGCGCCCTCGAGCTCGCGTCGCGTCGCGTCGTGTCCCTCTCGTTGATGGAGGCTCC 180
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GGCAAATAGCGTGGCAGTGGCTGATGGGAACCCAAAGACAGCGACAGAGACTCCGCGGGT 240
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GGAGGATTACAAGGACGCTGCCATGTACTATGGAACGTACCCGGCTTATCTCTATGGAGC 300
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      CTATGGTGGCTGGGGGGAGTACTCCACATACCTGAGCCATGATGGTGCAGAGACACCAAC 360
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      TGCTGGTGCTTATGGGGATATGTACTATGGCTATTCTCCATATGGTTATTCAACTTCAGG 420
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      ACATGATAGTCAGATGTATGGATCTCAGCATTACCAGTACCAACCGACATACAACAAACA 480
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      ACAGAATACCACTGGCAAGCCTTCCAACAATGGAAAAACTGAAAATCCGGCTGCACTGCC 540
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      CCAAGGGGATGTCTCTGCTAATGGTGTTGATAGTCTGAAAGGTCAGAAAAAGACGAATCT 600
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GCTCCCGAAGGCAAGCCAGAATACACCAGGTTCCAACGGTTCCTATGGCCGACCTAGTGG 660
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GCGTTTTGGTAACTACCAGAACCAAACTAACCGAACAACTTATCCATGCTACAGTAGTCA 720
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      AATCTTCAATGGCAAGCAGCAAAAACTTCCCACTGGCAATCGTTCTCTGACAACTTCCAA 780
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      TTCTAAAAGCAAGGGACAGTCAAGGAATCAGAACACATATCCTCATCTCATGGGTCTGCA 840
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GACACCTACTTCTCCGTTGGGACCACCATCAATTTACTCGGCTAGTGGAATGTATGGATA 900
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      CAATGGGAGTTCATATGGGTCCGGCCTATGGTATGGATCACACCTGTATGGTTCTGGATT 960
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GTACGGGGGATGGAATGCACTGTCGGATGGCAAATACAATCCCAGAGGAAGAGGTAATGG 1020
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      ATCCTATGGTTATATCCATGGAAATCAGGATGGGTTTAATGAGCTAAGAAGAGGGCCAAG 1080
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      AAGTGGTCTTTTCAATAACCAACAGGGAGTTGGAGCTACTGTTGCACCTGTGAAGGGACA 1140
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      AGAGCTTTCAGCCAGCGATAGCTCGCTTTCTGTCATGAAGGATCAGTATAACCGGGCTGA 1200
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      TTTTGTGGAAACATACTCAGATGCTAAATTCTTCATCATCAAATCATACAGTGAGGATGA 1260
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      TGTTCACAAGAGCATTAAGTACAATGTTTGGGCTAGCACATCCAATGGTAATAAAAGGCT 1320
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      TGATGCTGCTTATCAGGAGGCTAAGGAAAAATCAAGTGATTCTTCTGTGTTCCTTCTTTT 1380
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      CTCTGTGAATGCAAGTGGTCAGTTTGTTGGTCTTGCTGAGATGGTGGGCCGTGTTGATTT 1440
consensus_13677#1      -----------------------------------------------GCCGTGTTGATTT 13
                                                                      *************

consensus_13677#0      TAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTG 1500
consensus_13677#1      TAACAAGACATTGGAACACTGGCAACAGGACAAGTGGACTGGCTGTTTCCCTGTAAAGTG 73
                       ************************************************************

consensus_13677#0      GCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGA 1560
consensus_13677#1      GCATATTGTGAAGGATGTTCCAAACAGCTTACTGAAACACATCATTCTTGAAAACAATGA 133
                       ************************************************************

consensus_13677#0      GAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCA 1620
consensus_13677#1      GAACAAACCAGTCACAAATTGCAGAGATACTCATGAGGTGAAACTTGAGCCAGGGCTTCA 193
                       ************************************************************

consensus_13677#0      AGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTT 1680
consensus_13677#1      AGTGCTTAAGATTTTCAAGGACCATGTCTGCAAGACGTCGTTACTGGATGACTTTGATTT 253
                       ************************************************************

consensus_13677#0      CTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAA 1740
consensus_13677#1      CTATGATAATCGTGAGAAGATGATGCAAGAGAGGAAGGCAAAGCATCAACAACTGAAGAA 313
                       ************************************************************

consensus_13677#0      GGTCGTTGATGAGAAGCTGCTTAATGCTGTGGACACTGAGAACAGCTTGTTAACTGTGAA 1800
consensus_13677#1      GG---------------------------------------------------------- 315
                       **                                                          

consensus_13677#0      ATCCAAATTGCAGGAAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGG 1860
consensus_13677#1      --------------AAACAGCTGAGGTAGAGATTGATGTCTTAAACAAAGAGCCTCATGG 361
                                     **********************************************

consensus_13677#0      TAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGCCCGTTTCTGTAAATGGTGT 1920
consensus_13677#1      TAAAGCAGGACAAGTTGATGGGAAAGAGAACGGTGTGTTGGCCGTTTCTGTAAATGGTGT 421
                       **************************************** *******************

consensus_13677#0      TACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAGT 1980
consensus_13677#1      TACCCCAGAAGATGTTCAGTTGACAAACGAGAAGTTGGCCAGTTTGAGCGTCTGTTAAGT 481
                       ************************************************************

consensus_13677#0      TTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATA-TAGGTTGG 2039
consensus_13677#1      TTTTTCTCATCATTTCAGCCATTGAGGGGTGGTGTAAGGTGAAGGGCTATNATAGGTTGG 541
                       **************************************************  ********

consensus_13677#0      GAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTTG 2099
consensus_13677#1      GAAGGCAGCAATCAAGGCAATTCAAGATCCATTTGAGTTTCCTTGTGAGTTTCTCCGTTG 601
                       ************************************************************

consensus_13677#0      CTTTTGGTTAGGACTTGGAGGTGGTTTCATAGGAGAGCTAGAAGTTTAGCTGATTGTGTC 2159
consensus_13677#1      CTTT-------------------------------------------------------- 605
                       ****                                                        

consensus_13677#0      TGGTGAGATGTGCGGATAGCAGTAGAGGTTTTTTGGACTTTTGGTTTTCAATGATGGATC 2219
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      ATTGGTTTGCGCAGTTCCTTTTCTTTTATATTCTGTTCTCTTTTGCGTTGGGCAGGTGTA 2279
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GCTTTTTTTAGTATGTTTGGTGTCTGAACCTGAAAGCATGTCAAGAGTGTTTAAACCTGG 2339
consensus_13677#1      ------------------------------------------------------------
                                                                                   

consensus_13677#0      GAATTCAATTAAGAAATTTACTCTTTTGTTCCAAAAAAAATTTTCTGA 2387
consensus_13677#1      ------------------------------------------------