cluster # 13770

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Oryza sativa
cluster # 13770 cluster # 13770 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13770#0 length = 1865 sequences # 11

consensus_13770#1 length = 732 sequences # 2
consensus_13770#2 length = 261 sequences # 1

consensusID : consensus_13770#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1865
fasta sequence

                              [ACACTGCGATCATCCGAAGCAATCTCAATCTCACCTGTCCATATCGCGCACGAATTCGTAAAGTGCAAGCTAGAAACATGTGTCACATGTCGTGCTGATCGTTCGATCCACCACGGTGCGAGCGGTGAGTGTCGTGACGAAGCAAAGGCAGAGGCAGCAGCGGGAAACGGCGCCCCCCCGTGTGTCGATCGGCTGTCTCGCCGAACAGGGCAAATACGCCAACAAAAAACGGCCTCGTTTTCCCTTGCTCGCACGCACCGTGTCGCTCCCAGGCGACAAGCCGTGGCGCGACTCGCCGCCCCCCTGCGCCCCCTCGCCCCCGCGCGTCGCTTTCACGTCGCACCTCTAAATACCACCACCCCGGACTCGGCGGCGAGCCCCCGCGCCAAGAACGAAAGGCGAGAGTGAGAGAGATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGAGGCTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGCCGGG-GCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACGCCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACGAGGCCTTCGGC-CTCTGCGACGCCGCCGCCCCCGCC-GACGTCGACGCCTTCTGCGCCCGCCTCGACGCGCCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGAGGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCG-AGCCTGGGGCTGCACGGCGCCTCGTTCCAGGACTGGCCGTGCCAGTTCCGCATGAACAGGTACAACTACACGCAGGACTCCGTGGGCTCCCCCGGC-GTGCAGGTCCACACGGACTCCGGCTTCCTCACCGTGCTCCAGGAGGACGAGTGCGTTGGCGGGCTCGAGGTGCTCGACCCCGCCGCCGGCGAGTTCGTCCCCGTCGACCCCCTCCCCGGCTCGTTCGTCGTCAACGTCGGCGACGTCGGCCAGGCGTGGAGCAACGGGAGGCTGCACAACGTGAAGCACAGGGTGCAGTGCGTGGCGGCGGTGCCGCGCGTGTCGATCGCCATGTTCCTGCTGGCGCCCAAGGACGACACGGTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGT-CGCGACC-GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAGTCCCTTTCTGAGCTCTCTAATTTTAGTTAGTTGAATCTTACACGTCCACCATCACGTAAAATCTAATTTCCATCACCATAAAAATTATCTTTGTCAGTATTTTTTTTCTTTTGAAATACAATACGTGTACACTCACCCCTATTAACACGCACACCCTATAGAACAATGATAGTAAATATTTCCAATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK121520             [ACACTGCGATCATCCGAAGCAATCTCAATCTCACCTGTCCATATCGCGCACGAATTCGTAAAGTGCAAGCTAGAAACATGTGTCACATGTCGTGCTGATCGTTCGATCCACCACGGTGCGAGCGGTGAGTGTCGTGACGAAGCAAAGGCAGAGGCAGCAGCGGGAAACGGCGCCCCCCCGTGTGTCGATCGGCTGTCTCGCCGAACAGGGCAAATACGCCAACAAAAAACGGCCTCGTTTTCCCTTGCTCGCACGCACCGTGTCGCTCCCAGGCGACAAGCCGTGGCGCGACTCGCCGCCCCCCTGCGCCCCCTCGCCCCCGCGCGTCGCTTTCACGTCGCACCTCTAAATACCACCACCCCGGACTCGGCGGCGAGCCCCCGCGCCAAGAACGAAAGGCGAGAGTGAGAGAGATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGAGGCTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGCCGGG GCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACGCCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACGAGGCCTTCGGC CTCTGCGACGCCGCCGCCCCCGCC GACGTCGACGCCTTCTGCGCCCGCCTCGACGCGCCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGAGGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCG AGCCTGGGGCTGCACGGCGCCTCGTTCCAGGACTGGCCGTGCCAGTTCCGCATGAACAGGTACAACTACACGCAGGACTCCGTGGGCTCCCCCGGC GTGCAGGTCCACACGGACTCCGGCTTCCTCACCGTGCTCCAGGAGGACGAGTGCGTTGGCGGGCTCGAGGTGCTCGACCCCGCCGCCGGCGAGTTCGTCCCCGTCGACCCCCTCCCCGGCTCGTTCGTCGTCAACGTCGGCGACGTCGGCCAGGCGTGGAGCAACGGGAGGCTGCACAACGTGAAGCACAGGGTGCAGTGCGTGGCGGCGGTGCCGCGCGTGTCGATCGCCATGTTCCTGCTGGCGCCCAAGGACGACACGGTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGT CGCGACC GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAG                                                                                                                                                                                                                                                                    ]
[+] EMBL AK105400             [  ACTGCGATCATCCGAAGCAATCTCAATCTCACCTGTCCATATCGCGCACGAATTCGTAAAGTGCAAGCTAGAAACATGTGTCACATGTCGTGCTGATCGTTCGATCCACCACGGTGCGAGCGGTGAGTGTCGTGACGAAGCAAAGGCAGAGGCAGCAGCGGGAAACGGCGCCCCCCCGTGTGTCGATCGGCTGTCTCGCCGAACAGGGCAAATACGCCAACAAAAAACGGCCTCGTTTTCCCTTGCTCGCACGCACCGTGTCGCTCCCAGGCGACAAGCCGTGGCGCGACTCGCCGCCCCCCTGCGCCCCCTCGCCCCCGCGCGTCGCTTTCACGTCGCACCTCTAAATACCACCACCCCGGACTCGGCGGCGAGCCCCCGCGCCAAGAACGAAAGGCGAGAGTGAGAGAGATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGAGGCTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGCCGGG GCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACGCCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACGAGGCCTTCGGC CTCTGCGACGCCGCCGCCCCCGCC GACGTCGACGCCTTCTGCGCCCGCCTCGACGCGCCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGAGGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCG AGCCTGGGGCTGCACGGCGCCTCGTTCCAGGACTGGCCGTGCCAGTTCCGCATGAACAGGTACAACTACACGCAGGACTCCGTGGGCTCCCCCGGC GTGCAGGTCCACACGGACTCCGGCTTCCTCACCGTGCTCCAGGAGGACGAGTGCGTTGGCGGGCTCGAGGTGCTCGACCCCGCCGCCGGCGAGTTCGTCCCCGTCGACCCCCTCCCCGGCTCGTTCGTCGTCAACGTCGGCGACGTCGGCCAGGCGTGGAGCAACGGGAGGCTGCACAACGTGAAGCACAGGGTGCAGTGCGTGGCGGCGGTGCCGCGCGTGTCGATCGCCATGTTCCTGCTGGCGCCCAAGGACGACACGGTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGT CGCGACC GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTAT                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSC102723            [                                                                                                                                                                                                                                                                                                                                                                                                           AAGGCGAGAGTNAGAGANATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGAGGCTGCGCNACGCGTGC NNCGGCTGGNCTGCTTCCGGTTTTCGGGGCACGGCGTG CGCCGGG GCTNCAGGCCGAAATGAAGGCCGCGGTGCGCGCGCTCTTCNACCTCCCCNAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA755288             [                                                                                                                                                                                                                                                                                                                                                                                                                  GAGTGAGAGAGATGGTGCAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGAAGGAGACGGCGAGGGTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGCCGGG GCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACGCCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGACCCGCCCGGCACAGCCAACCCGCTCTACGAGGGCTTCGGC CTCTGCGACGCCACCGCCCCCGCCGGACGTCTACGCCTTCTGCGCCCGCCTCTACGCGGCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGAGGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCGTAGCCTGGGGCTGCACGGCGCCTCGTTCCAGGACTGGTCGTGCCAGATCCGCATGAACAGGCATCACTACACGCAGGAGTCCGTGGGCT CCCCGACGGGGGAGG CCCCACGGACTCCGGCTTCCTCACCNTGCTCCAGGA GCCGAGTGCGTCGGGGCCCTC AGGTGCTCGACCCCGCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C72650               [                                                                                                                                                                                                                                                                                                                                                                                                                      GAGAGAGATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGTGGCGCGGAGGAGACGGCGAGGCTGCGCGACG GTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTG CGCCGGGNGCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACGCCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACGAGGCCTTCGGCTCT TGCGACGCCGCCGCCCCCGCC GACGTCGACGCCTTCTGCGCCCGCCTCGACGNGCCGCCCCACGTCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSC183               [                                                                                                                                                                                                                                                                                                                                                                                                                        GAGAGATGGTGGAGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGAGGCTNCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTG CGCCGGG GCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTNCCCGACGACGNCAAGCGCCGCAACGNCGACATCATCCCGGGCAGCGGCTANGTTCCGNCCGGCACAGCCAACCCGNTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU181846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCGACCCCCTCCCCGGCTCGTTCGTCGTCAACGTCGGCGACGTCGGCCAGGCGTGGAGCAACGGGAGGCTGCACAACGTNAAGCACAGGGTGCAGTGCGTGGCGGCGGTNCCGCGCGTGTCGATCGCCATGTTCCTGCTGGCGCCCAAGGACGACACGGTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGTCCGCGACCTGTTTATTACGCGGAGTGCTCNCTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTNTGAACAATAAAATNTTCGACGTACGACAGTGAAAAAAAaa                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU094365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCCTGCTGGCGCCCAAGGACGACACNGTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGC CTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGT CGCGACC GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCNGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI798333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCC CGGTCCATTGT CGCAACC GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAGTAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAGTCCCTTTCTGAGCTCTCTAATTTTAGTTAGTTGAATCTTACACGTCCACCATCACGTAAAATCTAATTTCCATCACCATAAAAA                                                                                                                                                                                ]
[+] EMBL BI798884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACCTGGCCACGGTCCATTGT CGCAACC GTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAGTAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAGTCCCTTTCTGAGCTCTCTAATTTTAGTTAGTTGAATCTTACACGTCCACCATCACGTAAAATCTAATTTCCATCACCATAAAAA                                                                                                                                                                                ]
[+] EMBL CF328429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATTGGGAGGAAAGTCCCTTTCTGAGCTCTCTAATTTTAGTTAGTTGAATCTTACACGTCCACCATCACGTAAAATCTAATTTCCATCACCATAATTCTTATCTTTGTCAGTATTTTTTTTCTTTTGAAATACAATACGTGTACACTCACCCCTATTAACACGCACACCCTATAGAACAATGATAGTAAATATTTCCAATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13770#0
ACACTGCGATCATCCGAAGCAATCTCAATCTCACCTGTCCATATCGCGCACGAATTCGTA
AAGTGCAAGCTAGAAACATGTGTCACATGTCGTGCTGATCGTTCGATCCACCACGGTGCG
AGCGGTGAGTGTCGTGACGAAGCAAAGGCAGAGGCAGCAGCGGGAAACGGCGCCCCCCCG
TGTGTCGATCGGCTGTCTCGCCGAACAGGGCAAATACGCCAACAAAAAACGGCCTCGTTT
TCCCTTGCTCGCACGCACCGTGTCGCTCCCAGGCGACAAGCCGTGGCGCGACTCGCCGCC
CCCCTGCGCCCCCTCGCCCCCGCGCGTCGCTTTCACGTCGCACCTCTAAATACCACCACC
CCGGACTCGGCGGCGAGCCCCCGCGCCAAGAACGAAAGGCGAGAGTGAGAGAGATGGTGG
AGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGA
GGCTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGC
CGGGGCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACG
CCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCA
ACCCGCTCTACGAGGCCTTCGGCCTCTGCGACGCCGCCGCCCCCGCCGACGTCGACGCCT
TCTGCGCCCGCCTCGACGCGCCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGA
GGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCGAGCCTGGGGCTGCACG
GCGCCTCGTTCCAGGACTGGCCGTGCCAGTTCCGCATGAACAGGTACAACTACACGCAGG
ACTCCGTGGGCTCCCCCGGCGTGCAGGTCCACACGGACTCCGGCTTCCTCACCGTGCTCC
AGGAGGACGAGTGCGTTGGCGGGCTCGAGGTGCTCGACCCCGCCGCCGGCGAGTTCGTCC
CCGTCGACCCCCTCCCCGGCTCGTTCGTCGTCAACGTCGGCGACGTCGGCCAGGCGTGGA
GCAACGGGAGGCTGCACAACGTGAAGCACAGGGTGCAGTGCGTGGCGGCGGTGCCGCGCG
TGTCGATCGCCATGTTCCTGCTGGCGCCCAAGGACGACACGGTGAGCGCGCCGGGGGAGC
TGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACCGGAGGC
TCCGGCTGTCCACCGGCGAGCGCGCCGGCGAGGCGCTCGCGCGTCTGGCGGCCTGACACC
TGGCCACGGTCCATTGTCGCGACCGTTTATTACGCGGAGTGCTCACTGCTGACTAGAATG
TCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACGTACGA
CAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCT
TTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGT
AAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAGTCCCTTTCTGAGCTC
TCTAATTTTAGTTAGTTGAATCTTACACGTCCACCATCACGTAAAATCTAATTTCCATCA
CCATAAAAATTATCTTTGTCAGTATTTTTTTTCTTTTGAAATACAATACGTGTACACTCA
CCCCTATTAACACGCACACCCTATAGAACAATGATAGTAAATATTTCCAATTATTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA

consensusID : consensus_13770#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 732
fasta sequence

                              [TCCTGTGGGNTCCCCCGGCGTGCAGGTCCACACGGACTTCCGNCTTCCTTCACCGTGCTCCAGGAGGACAGAGTGCGTTTGGCGGGCTCTGAGTGCTCTGACCCCGCCCCGGCGAGTTCGTCCCATGTCTGACCCCCTCCCCGGCTCGTTCTTCTNTCAACGTCAGGCGACGTCNGGCACAGGCTGTGGAGCAACGGGAGGGCTGCACAACGTGAAGCACAGGGTCAGTGCAGTGGCGTCGGTGCCAGCAGCGTTTCAGATCACCATGTTCACTGCTGGCAGCCCAAGGACGACACGGTGAGCGC-CCGGGGGA-CTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACACGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCACGGCGAGGCGCTCGCGCGTCTGGCAGGCACTGACACCTGGCCACGGTCCATTGTCGCGACACGTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTA-GCCTCCCTGTAT-GCCGTGTCGATTCTGAACAAT-AAATCTTCGACGCTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAAAAAAAAAAAA]

[+] EMBL BI806458             [TCCTGTGGGNTCCCCCGGCGTGCAGGTCCACACGGACTTCCGNCTTCCTTCACCGTGCTCCAGGAGGACAGAGTGCGTTTGGCGGGCTCTGAGTGCTCTGACCCCGCCCCGGCGAGTTCGTCCCATGTCTGACCCCCTCCCCGGCTCGTTCTTCTNTCAACGTCAGGCGACGTCNGGCACAGGCTGTGGAGCAACGGGAGGGCTGCACAACGTGAAGCACAGGGTCAGTGCAGTGGCGTCGGTGCCAGCAGCGTTTCAGATCACCATGTTCACTGCTGGCAGCCCAAGGACGACACGGTGAGCGC CCGGGGGA CTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTACACGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCACGGCGAGGCGCTCGCGCGTCTGGCAGGCACTGACACCTGGCCACGGTCCATTGTCGCGACACGTTTATTACGCGGAGTGCTCACTGCTGACTAGAATGTCCATTA GCCTCCCTGTAT GCCGTGTCGATTCTGAACAAT AAATCTTCGACGCTACGACAGTGAAA                                                                                                                                                                       ]
[+] EMBL AU102101             [                                                                                                                                                                                                                                                          GCGTNTC GATCGCCATGTTCCCTGCTGGC NCCCAAGGACGACNCGGTGAGCGCGCCGGGGGAGCTNGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGACGACTAC CGGAGGCTCCGGCTGTCCACCGGCGAGCGCGC CGGCGAGG NCTCGCGCGTCTGGC GGC CTGACACCTGGCCACGGTCCATTGTCGCGAC CGTTTATTNCGCGGAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTGAACAATAAAATCTTCGACG TACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAAAAAAAAAAAAAA]




>consensus_13770#1
TCCTGTGGGNTCCCCCGGCGTGCAGGTCCACACGGACTTCCGNCTTCCTTCACCGTGCTC
CAGGAGGACAGAGTGCGTTTGGCGGGCTCTGAGTGCTCTGACCCCGCCCCGGCGAGTTCG
TCCCATGTCTGACCCCCTCCCCGGCTCGTTCTTCTNTCAACGTCAGGCGACGTCNGGCAC
AGGCTGTGGAGCAACGGGAGGGCTGCACAACGTGAAGCACAGGGTCAGTGCAGTGGCGTC
GGTGCCAGCAGCGTTTCAGATCACCATGTTCACTGCTGGCAGCCCAAGGACGACACGGTG
AGCGCCCGGGGGACTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAGTACGA
CGACTACACGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCACGGCGAGGCGCTCGCGCGT
CTGGCAGGCACTGACACCTGGCCACGGTCCATTGTCGCGACACGTTTATTACGCGGAGTG
CTCACTGCTGACTAGAATGTCCATTAGCCTCCCTGTATGCCGTGTCGATTCTGAACAATA
AATCTTCGACGCTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGATGGGAATTT
TAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAATAACTGGA
AGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATTGGGAGGAA
AAAAAAAAAAAA

consensusID : consensus_13770#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence

                              [TCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCNGAGGAGACGGCGAGGCTGCNCGACGGTGCTNCGGCTGGGCTGCTTCCGGNTNTCGGGGCACGGCGTNCGCCGGGNGCTTCAGGCCGAAATGAAGGCCGCGGTGCGCGCNCTCTTCGACCTCCCCGACGACGCCAAGCNNNGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACNAGGCCTTCGGCTCT]

[+] EMBL C28182               [TCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCNGAGGAGACGGCGAGGCTGCNCGACGGTGCTNCGGCTGGGCTGCTTCCGGNTNTCGGGGCACGGCGTNCGCCGGGNGCTTCAGGCCGAAATGAAGGCCGCGGTGCGCGCNCTCTTCGACCTCCCCGACGACGCCAAGCNNNGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCGCTCTACNAGGCCTTCGGCTCT]




>consensus_13770#2
TCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCNGAGGAGACGGCGAGGC
TGCNCGACGGTGCTNCGGCTGGGCTGCTTCCGGNTNTCGGGGCACGGCGTNCGCCGGGNG
CTTCAGGCCGAAATGAAGGCCGCGGTGCGCGCNCTCTTCGACCTCCCCGACGACGCCAAG
CNNNGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCAACCCG
CTCTACNAGGCCTTCGGCTCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13770#0      ACACTGCGATCATCCGAAGCAATCTCAATCTCACCTGTCCATATCGCGCACGAATTCGTA 60
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AAGTGCAAGCTAGAAACATGTGTCACATGTCGTGCTGATCGTTCGATCCACCACGGTGCG 120
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AGCGGTGAGTGTCGTGACGAAGCAAAGGCAGAGGCAGCAGCGGGAAACGGCGCCCCCCCG 180
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      TGTGTCGATCGGCTGTCTCGCCGAACAGGGCAAATACGCCAACAAAAAACGGCCTCGTTT 240
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      TCCCTTGCTCGCACGCACCGTGTCGCTCCCAGGCGACAAGCCGTGGCGCGACTCGCCGCC 300
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CCCCTGCGCCCCCTCGCCCCCGCGCGTCGCTTTCACGTCGCACCTCTAAATACCACCACC 360
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CCGGACTCGGCGGCGAGCCCCCGCGCCAAGAACGAAAGGCGAGAGTGAGAGAGATGGTGG 420
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AGATCCCGGCGATCGACCTGCGGCTGGCCGGCGGCGGCGGCGGCGCGGAGGAGACGGCGA 480
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      GGCTGCGCGACGCGTGCGCGCGGCTGGGCTGCTTCCGGGTGTCGGGGCACGGCGTGCCGC 540
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CGGGGCTCCAGGCCGAGATGAAGGCCGCGGTGCGCGCGCTCTTCGACCTCCCCGACGACG 600
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CCAAGCGCCGCAACGCCGACATCATCCCGGGCAGCGGCTACGTCCCGCCCGGCACAGCCA 660
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      ACCCGCTCTACGAGGCCTTCGGCCTCTGCGACGCCGCCGCCCCCGCCGACGTCGACGCCT 720
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      TCTGCGCCCGCCTCGACGCGCCGCCCCACGTCAGGGAGACCGTGAAGGCGTACGCCGAGA 780
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      GGATGCACTCGCTGATCGTGGACGTCGCCGGCAAGGTCGCCGCGAGCCTGGGGCTGCACG 840
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      GCGCCTCGTTCCAGGACTGGCCGTGCCAGTTCCGCATGAACAGGTACAACTACACGCAGG 900
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      ACTCCGTGGGCTCCCCCGGCGTGCAGGTCCACACGGACT-CCGGCTTCCT-CACCGTGCT 958
consensus_13770#1      -TCCTGTGGGNTCCCCCGGCGTGCAGGTCCACACGGACTTCCGNCTTCCTTCACCGTGCT 59
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CCAGGAGGAC-GAGTGCGTT-GGCGGGCTCGAGGTGCTC-GACCCCGCCGCCGGCGAGTT 1015
consensus_13770#1      CCAGGAGGACAGAGTGCGTTTGGCGGGCTCTGAGTGCTCTGACCCCGCC-CCGGCGAGTT 118
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      CGTCCC-CGTC-GACCCCCTCCCCGGCTCGTTCGTC-GTCAACGTC-GGCGACGTCGGCC 1071
consensus_13770#1      CGTCCCATGTCTGACCCCCTCCCCGGCTCGTTCTTCTNTCAACGTCAGGCGACGTCNGGC 178
consensus_13770#2      --------------------TCCCGGCG-ATCGACCTGCGGCTGGCCGGCGGCGGCGGCG 39
                                            ******   *    *       * * **** ** * *  

consensus_13770#0      A---GGCGTGGAGCAACGGGAGG-CTGCACAACGTGAAGCACAGGGTGCAGTGC-GTGGC 1126
consensus_13770#1      ACAGGCTGTGGAGCAACGGGAGGGCTGCACAACGTGAAGCACAGGGT-CAGTGCAGTGGC 237
consensus_13770#2      GC--GCNGAGGAG--ACGGCGAGGCTGCNCGACG--GTGCTNCGGCT---GGGC--TGCT 88
                           *  * ****  ****   * **** * ***    **   ** *   * **  **  

consensus_13770#0      GGCGGTGCCGC--GCGTGTC-GATCGCCATGTTC-CTGCTGGC-GCCCAAGGACGACACG 1181
consensus_13770#1      GTCGGTGCCAGCAGCGTTTCAGATCACCATGTTCACTGCTGGCAGCCCAAGGACGACACG 297
consensus_13770#2      TCCGGNTNTCGGGGCACGGC-GTNCGCCGGGNGC--TTCAGGCCGAA-ATGAAGGCCGCG 144
                         ***        **    * *  * **  *  *  * * *** *   * * * * * **

consensus_13770#0      GTGAGCGCGCCGGGGGAGCTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAG 1241
consensus_13770#1      GTGAGCGC-CCGGGGGA-CTGGTGGACGGCGAGCACCCGCGCCGGTACAGGGAGTTCAAG 355
consensus_13770#2      GTGCGCGCNCTCTTCGACCTCCCCGACGACGCCAAGCNNNGCAACGCCGACATCATCCCG 204
                       *** **** *     ** **    **** **   * *   **     *       **  *

consensus_13770#0      TACGACGACTAC-CGGAGGCTCCGGCTGTCCACCGGCGAGCGCGC-CGGCGAGGCGCTCG 1299
consensus_13770#1      TACGACGACTACACGGAGGCTCCGGCTGTCCACCGGCGAGCGCGCACGGCGAGGCGCTCG 415
consensus_13770#2      GGCAGCGGCTAC------GTCCCGCCCGGCA--CAGCCAACCCGCTCTACNAGGCCTTCG 256
                         *  ** ****      *  *** * * *   * ** * * *** *  * ****  ***

consensus_13770#0      CGCGTCTGGCGGCC--TGACACCTGGCCACGGTCCATTGTCGCGAC-CGTTTATTACGCG 1356
consensus_13770#1      CGCGTCTGGCAGGCACTGACACCTGGCCACGGTCCATTGTCGCGACACGTTTATTACGCG 475
consensus_13770#2      GCTCT------------------------------------------------------- 261
                           *                                                       

consensus_13770#0      GAGTGCTCACTGCTGACTAGAATGTCCATTAGGCCTCCCTGTATGGCCGTGTCGATTCTG 1416
consensus_13770#1      GAGTGCTCACTGCTGACTAGAATGTCCATTAG-CCTCCCTGTATG-CCGTGTCGATTCTG 533
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AACAATAAAATCTTCGACG-TACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGAT 1475
consensus_13770#1      AACAATAAA-TCTTCGACGCTACGACAGTGAAAAAAATTTGTAAAGGATGCTGAGGGGAT 592
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      GGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAA 1535
consensus_13770#1      GGGAATTTTAGGGGTTAATAAGTCTTTTGTTTGGCTGGAGGAGATGATGAGTTGTAGGAA 652
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      TAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATT 1595
consensus_13770#1      TAACTGGAAGGTGGAGTTTGTGAGTAAATTCCCACCTTTTTAATATAGAGGACTATAATT 712
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      GGGAGGAAAGTCCCTTTCTGAGCTCTCTAATTTTAGTTAGTTGAATCTTACACGTCCACC 1655
consensus_13770#1      GGGAGGAAAAAAAAAAAAAA---------------------------------------- 732
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      ATCACGTAAAATCTAATTTCCATCACCATAAAAATTATCTTTGTCAGTATTTTTTTTCTT 1715
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      TTGAAATACAATACGTGTACACTCACCCCTATTAACACGCACACCCTATAGAACAATGAT 1775
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AGTAAATATTTCCAATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1835
consensus_13770#1      ------------------------------------------------------------
consensus_13770#2      ------------------------------------------------------------
                                                                                   

consensus_13770#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1865
consensus_13770#1      ------------------------------
consensus_13770#2      ------------------------------