cluster # 13800

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Oryza sativa
cluster # 13800 cluster # 13800 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13800#0 length = 594 sequences # 11
consensus_13800#1 length = 510 sequences # 1

consensus_13800#2 length = 213 sequences # 1
consensus_13800#3 length = 133 sequences # 1

consensusID : consensus_13800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 594
fasta sequence

                              [TCCTGGGGGAGCTCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG-GC-GGGGGGAG-CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC-GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC-GC-GG-GCGGC-GGGACCTCCACGGAC-AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC-GTGTTCTGGTGGTTTTCTGGGT------AAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU173037             [TCCTGGGGGAGCTCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTAC                                                                                                                                                                           ]
[+] EMBL AU065879             [     gaGGAGCTCGAGCAATCCGCCGTCCGTNTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCNAGCNCGCGCAGGCGGNAAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGNAGGCC  C GGNGCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGC GCGCAAAGAAGTAACCGGCACCGGCGACACGTCTNTACGATTAGTAATGCCTTATAAGNTTTGTACCTCATGCAT                                                                                                                                                                                                          ]
[+] EMBL AU225447             [       gccGCT GAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTG                                                                                                                                                                                                                                                  ]
[+] EMBL AK121882             [            TCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGTTCTGGTGGTTTTCT                              ]
[+] EMBL AK071167             [            TCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGTTCTGGTGG                                    ]
[+] EMBL CB681878             [                       GCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGT                                            ]
[+] EMBL C74296               [                        CCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACNGCGACCGCGAGCNCGCGCAGGCGGTAAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAANGCCGCGAANAAGGC                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AF074777             [                             CGTGTCGTCGTCGTCGGCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAG GC GGGGGGAG CCCGGAATCAGGAANATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAANAANGCGGCGCANGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGGATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCNTAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGT                                            ]
[+] EMBL BI795543             [                                                                                            GAGTCGAGTTCGGGGGGGAGCCCCGGAATCAGGAAGATGACTC CGGAAACCAGAGGGACCTCGACC CGAGCGCGC CAGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCAGCGAGAGGGATAAGAAGGCGCTGGAGGAGAA GCCGCGAAGAAGGCGGCGCAGGCCAGCAGG GCGGCAGGGACCTCCACGGACAAACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGGATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGAT CGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGTTCTGGTGGTTTTCTGGGT      TGTCGCCAAAAAAAAAA   ]
[+] EMBL AU077738             [                                                                                                                                                             CCGTGAGCGC CTCAGGCNCGGAAGCCCAACGCCAAGGNCCCCCAGGACGGGNTCACCCCGGAGNAGCGCC GCGAGAGGGNTAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC NC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGC GTGTTCTGGTGGTTTTNTGGGTTGTCGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU182760             [                                                                                                                                                                           AGGCGCGGAAGCCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCC GCGAGAGGGATAAGAAGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCC GC GG GCGGC GGGACCTCCACGGAC AACAAGAATAAGGCCGGCGGCGCAAANAAGTAACCGGCACCGGCGACACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCNGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATGATAATAATATGCGGTGTTCTGGTGGTTTTCTGGGT      AAAAAAAAAAAA        ]




>consensus_13800#0
TCCTGGGGGAGCTCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGCGTCGGCGAGGTCG
TCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAATCA
GGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAGC
CCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCGCGAGAGGGATAAGA
AGGCGCTGGAGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCCGCGGGCGGCGGGACCTCCA
CGGACAACAAGAATAAGGCCGGCGGCGCAAAGAAGTAACCGGCACCGGCGACACGTCTGT
ACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCCGTGTGCCTTAA
CTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATCTGTCTCATTAG
ATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATACTGAATATGATG
ATAATAATATGCGTGTTCTGGTGGTTTTCTGGGTAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13800#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence

                              [CGCCGTCCGTGTCGTCGTCGTCAGCCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCCAGGCGAGGCGGGGGGAGCCCGGAATCAGGAAGATGACTCGCGGAAACCAGAGGGACCGCGACCGCGAGCGCTCGCAGGCTCGGAAGCCCATCGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCTCGAGAGGGATCAATATGGCGCTGGATGAGACCGCCTCGATGACGGCGGCGCAGGCCGCGGGCGGCGGGACCTCCACGAGACACTCAAGAATCAAGGCCGGCGGCGCTAGGGATGTATCCCGTGCACCGGCGAACCCGTCTGGTAACGATGCAGTCAATTGCTCTTATCACGCTTTTGTCACCTGCATAGCATCCTTAGCGGATCCCGTGGTCGGCCTTCAACCTGCTTCGTCAACCTACTAGTCACAACATCAAAAAATAGCGGCGTCATTAGCTGTTTCGAGGTACCGTTAAACATGCTAGTGC]

[+] EMBL CA753659             [CGCCGTCCGTGTCGTCGTCGTCAGCCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCCAGGCGAGGCGGGGGGAGCCCGGAATCAGGAAGATGACTCGCGGAAACCAGAGGGACCGCGACCGCGAGCGCTCGCAGGCTCGGAAGCCCATCGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCTCGAGAGGGATCAATATGGCGCTGGATGAGACCGCCTCGATGACGGCGGCGCAGGCCGCGGGCGGCGGGACCTCCACGAGACACTCAAGAATCAAGGCCGGCGGCGCTAGGGATGTATCCCGTGCACCGGCGAACCCGTCTGGTAACGATGCAGTCAATTGCTCTTATCACGCTTTTGTCACCTGCATAGCATCCTTAGCGGATCCCGTGGTCGGCCTTCAACCTGCTTCGTCAACCTACTAGTCACAACATCAAAAAATAGCGGCGTCATTAGCTGTTTCGAGGTACCGTTAAACATGCTAGTGC]




>consensus_13800#1
CGCCGTCCGTGTCGTCGTCGTCAGCCGTCGGCGAGGTCGTCGTCTCCGGCAGGGGGTGGG
GGAGCCAGGTCCAGGCGAGGCGGGGGGAGCCCGGAATCAGGAAGATGACTCGCGGAAACC
AGAGGGACCGCGACCGCGAGCGCTCGCAGGCTCGGAAGCCCATCGCCAAGGGCCCCCAGG
ACGGGCTCACCCCGGAGCAGCGCCTCGAGAGGGATCAATATGGCGCTGGATGAGACCGCC
TCGATGACGGCGGCGCAGGCCGCGGGCGGCGGGACCTCCACGAGACACTCAAGAATCAAG
GCCGGCGGCGCTAGGGATGTATCCCGTGCACCGGCGAACCCGTCTGGTAACGATGCAGTC
AATTGCTCTTATCACGCTTTTGTCACCTGCATAGCATCCTTAGCGGATCCCGTGGTCGGC
CTTCAACCTGCTTCGTCAACCTACTAGTCACAACATCAAAAAATAGCGGCGTCATTAGCT
GTTTCGAGGTACCGTTAAACATGCTAGTGC

consensusID : consensus_13800#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 213
fasta sequence

                              [GAGGTCGTCNTCTCCNNCAGGAGGTGGGGGCGCCAGGTCGANGCGANTGGGGGGAGCCCGGAATCAGGAAGATGATCGCGGAAACCAGAGGRACCGCGACCGCGAGCNCGCGCAGGNGGAACAGACCCAACGCCAAGGCCCCCAGGANGGNNTCACCCCGGAGNAGCGCCGCGAGAGGGANAAGAAGCCGCTGGCAGGAGAAGACCGCGAAGA]

[+] EMBL OS38019              [GAGGTCGTCNTCTCCNNCAGGAGGTGGGGGCGCCAGGTCGANGCGANTGGGGGGAGCCCGGAATCAGGAAGATGATCGCGGAAACCAGAGGRACCGCGACCGCGAGCNCGCGCAGGNGGAACAGACCCAACGCCAAGGCCCCCAGGANGGNNTCACCCCGGAGNAGCGCCGCGAGAGGGANAAGAAGCCGCTGGCAGGAGAAGACCGCGAAGA]




>consensus_13800#2
GAGGTCGTCNTCTCCNNCAGGAGGTGGGGGCGCCAGGTCGANGCGANTGGGGGGAGCCCG
GAATCAGGAAGATGATCGCGGAAACCAGAGGRACCGCGACCGCGAGCNCGCGCAGGNGGA
ACAGACCCAACGCCAAGGCCCCCAGGANGGNNTCACCCCGGAGNAGCGCCGCGAGAGGGA
NAAGAAGCCGCTGGCAGGAGAAGACCGCGAAGA

consensusID : consensus_13800#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 133
fasta sequence

                              [TCGTCGTCTCCGGCAGGGGTGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGGACCGGAGCCCCCAGGGAAGCCCAACGCCAAGGGGCCACG]

[+] EMBL AA749926             [TCGTCGTCTCCGGCAGGGGTGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAATCAGGAAGATGACTCGCGGCAACCAGAGGGACCGGACCGGAGCCCCCAGGGAAGCCCAACGCCAAGGGGCCACG]




>consensus_13800#3
TCGTCGTCTCCGGCAGGGGTGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAAT
CAGGAAGATGACTCGCGGCAACCAGAGGGACCGGACCGGAGCCCCCAGGGAAGCCCAACG
CCAAGGGGCCACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13800#1      ----------------------CGCCGTCCGTGTCGTCGTCGTCAGCCGTCGGCGAGGTC 38
consensus_13800#3      ----------------------------------------------------------TC 2
consensus_13800#0      TCCTGGGGGAGCTCGAGCAATCCGCCGTCCGTGTCGTCGTCGTCGGC-GTCGGCGAGGTC 59
consensus_13800#2      ------------------------------------------------------GAGGTC 6
                                                                                 **

consensus_13800#1      GTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCCAGGCGAGGCGGGGGGAGCCCGGAATC 98
consensus_13800#3      GTCGTCTCCGGCAGGGG-TGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAATC 61
consensus_13800#0      GTCGTCTCCGGCAGGGGGTGGGGGAGCCAGGTCGAGGCGAGGCGGGGGGAGCCCGGAATC 119
consensus_13800#2      GTCNTCTCCNNCAGGAGGTGGGGGCGCCAGGTCGANGCGAN-TGGGGGGAGCCCGGAATC 65
                       *** *****  **** * ****** ******** * ****   *****************

consensus_13800#1      AGGAAGATGACTCGCGGAAACCAGAGGGACCGCGACCGCGAGCGCTCGCAGGCTCGGAAG 158
consensus_13800#3      AGGAAGATGACTCGCGGCAACCAGAGGGACCG-GACCG---GAGCCCCCAGG----GAAG 113
consensus_13800#0      AGGAAGATGACTCGCGGCAACCAGAGGGACCGCGACCGCGAGCGCGCGCAGGCGCGGAAG 179
consensus_13800#2      AGGAAGATGA-TCGCGGAAACCAGAGGRACCGCGACCGCGAGCNCGCGCAGGNGGAACAG 124
                       ********** ****** ********* **** *****   *  * * ****      **

consensus_13800#1      -CCCATCGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCTCGAGAGGGATCA 217
consensus_13800#3      -CCCAACGCCAAGGGGCCACG--------------------------------------- 133
consensus_13800#0      -CCCAACGCCAAGGGCCCCCAGGACGGGCTCACCCCGGAGCAGCGCCGCGAGAGGGAT-A 237
consensus_13800#2      ACCCAACGCCAAGG-CCCCCAGGANGGNNTCACCCCGGAGNAGCGCCGCGAGAGGGAN-A 182
                        **** ********  ** *                                        

consensus_13800#1      ATATGGCGCTGG-ATGAGACCGCCTCGATGACGGCGGCGCAGGCCGCGGGCGGCGGGACC 276
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      AGAAGGCGCTGG-AGGAGAAGGCCGCGAAGAAGGCGGCGCAGGCCGCGGGCGGCGGGACC 296
consensus_13800#2      AGAAGCCGCTGGCAGGAGAAGACCGCGAAGA----------------------------- 213
                                                                                   

consensus_13800#1      TCCACGAGACACTCAAGAATCAAGGCCGGCGGCGCTAGGGATGTATCCCGTGCACCGGCG 336
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      TCCACGGACAAC---AAGAATAAGGCCGGCGGCGCAAAGAAGTAACC---GGCACCGGCG 350
consensus_13800#2      ------------------------------------------------------------
                                                                                   

consensus_13800#1      AACCCGTCTGGTAACGATGCAGTCAATTGCTCTTATCACGCTTTTGTCACCTGCATAGCA 396
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      A-CACGTCTGTACGATTAGTAATGCCTTATAAGCTTTGTACCTCATGCATCTGCGTATCC 409
consensus_13800#2      ------------------------------------------------------------
                                                                                   

consensus_13800#1      TCCTTAGCGGATCCCGTGGTCGGCCTTCAACCTGCTTCGTCAACCTACTAGTCACAACAT 456
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      GTGTGCCTTAACTCTTGTTACTCTGTCTCGTTAGATGCGGTATTTGTTGGGTCATAAATC 469
consensus_13800#2      ------------------------------------------------------------
                                                                                   

consensus_13800#1      CAAAAAAT-AGCGGCGTCATTAGCTGTTTCGAGGTACCGTTAAACATGCTAGTGC----- 510
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      TGTCTCATTAGATGCGGTATTTGTTGGGTCATAAATCTGTCATCTGTAAGCTTCAAATAC 529
consensus_13800#2      ------------------------------------------------------------
                                                                                   

consensus_13800#1      ------------------------------------------------------------
consensus_13800#3      ------------------------------------------------------------
consensus_13800#0      TGAATATGATGATAATAATATGCGTGTTCTGGTGGTTTTCTGGGTAAAAAAAAAAAAAAA 589
consensus_13800#2      ------------------------------------------------------------
                                                                                   

consensus_13800#1      -----
consensus_13800#3      -----
consensus_13800#0      AAAAA 594
consensus_13800#2      -----