cluster # 13846

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Oryza sativa
cluster # 13846 cluster # 13846 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13846#0 length = 1845 sequences # 13

consensus_13846#1 length = 609 sequences # 1

consensusID : consensus_13846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1845
fasta sequence

                              [TGAATTCGGGACCATCCCGTGCGGATTTGGCGGTGGGTGAGTGTGGGATTGGGATGAGCTTCTGGTTCCCCGCTGTGTGGTCACTACAGGAACGGAGCTTTGCTGCAGGTTTGGTCTGGAACACGAGCCTGAAGAGCGGTGAGGGCATAGCTGCAAGCTCCAACACAATAGCTCCATACTTTAGGGGAAGTCTTTCGGGTCTGAAGTATAACTACACCAAGGTTGATGAGGCAAAGAAGTATTATGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCATATCGGGACTTAACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCT-CTGGAT-ATGCATC-ACCAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCTATCATATAATGAAAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATGTCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACTGTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCAAGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACATTGCTTCGTATGGGTTGTACATAGACAAAGTGGATGAGTCGATGTGGAGAATGGACTTGGAAAGCACCATGGCCCTGATCTCGATGACACTATCCTGTTTGTTCATTGCTGTGCAACTGTTCCATGTCAAGAAGGTTCCTGAAGCGCTTCCTGCCATGTCAATCACCATGCTTGTAGTTCTCTCTTTGGGTTACATGATACCTCTTGTGTTGAACTTTGAGGCCCTCTTCAAGAACAGTAACAAACAGACATTTCCACTTTCAGGTGGTGGTTGGCTTGAGGTGAATGAAGTCATTGTGCGAATCATTACCATGGTAACCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCTGCACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT-GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC-TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAATGTTTAAAATGCTCCGTTCATTTCTAAAAAAAAAAAAAAAAA]

[+] EMBL CB620449             [TGAATTCGGGACCATCCCGTGCGGATTTGGCGGTGGGTGAGTGTGGGATTGGGATGAGCTTCTGGTTCCCCGCTGTGTGGTCACTACAGGAACGGAGCTTTGCTGCAGGTTTGGTCTGGAACACGAGCCTGAAGAGCGGTGAGGGCATAGCTGCAAGCTCCAACACAATAGCTCCATACTTTAGGGGAAGTCTTTCGGGTCTGAAGTATAACTACACCAAGGTTGATGAGGCAAAGAAGTATTATGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCATATCGGGACTTAACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCT CTGGAT ATGCATC ACCAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCTATCATATAATGAAAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATGTCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACTGTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCAAGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACATTGCTTCGTATGGGGTGTACATAGAACAAGTGGATGAGTCGATCTGGAGAATGGACTTGGAAAGCACCATGGCCCTGATCTCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB618552             [                                            GGGATTGGGATGAGCTTCTGGTTCCCCGCTGTGTGGTCACTACAGGAACGGAGCTTTGCTGCAGGTTTGGTCTGGAACACGAGCCTGAAGAGCGGTGAGGGCATAGCTGCAAGCTCCAACACAATAGCTCCATACTTTAGGGGAAGTCTTTCGGGTCTGAAGTATAACTACACCAAGGTTGATGAGGCAAAGAAGTATTATGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCATATCGGGACTTAACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCT CTGGAT ATGCATC ACCAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCTATCATATAATGAAAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATGTCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACTGTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCAAGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACATTGCTTCGTATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS0974A             [                                                                                                                                                                                                                                                  ccgGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCATATCGGGACTTAACATTCCGGGTCTTNTTTCAGGAAGGGGGGGGCTNTTGGATAATGAATCAACCAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCTATCATATAATGACAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATGTCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK067152             [                                                                                                                                                                                                                                                                                                                       ACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCT CTGGAT ATGCATC ACCAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCTATCATATAATGACAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATGTCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACTGTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCAAGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACATTGCTTCGTATGGGTTGTACATAGACAAAGTGGATGAGTCGATGTGGAGAATGGACTTGGAAAGCACCATGGCCCTGATCTCGATGACACTATCCTGTTTGTTCATTGCTGTGCAACTGTTCCATGTCAAGAAGGTTCCTGAAGCGCTTCCTGCCATGTCAATCACCATGCTTGTAGTTCTCTCTTTGGGTTACATGATACCTCTTGTGTTGAACTTTGAGGCCCTCTTCAAGAACAGTAACAAACAGACATTTCCACTTTCAGGTGGTGGTTGGCTTGAGGTGAATGAAGTCATTGTGCGAATCATTACCATGGTAACCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCTGCACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGCTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTG                                                         ]
[+] EMBL CB000455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCACTATGTCGGGCCTTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATGATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACTGTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCAAGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACATTGCTTCGTATGGGTTGTACATAGACAAAGTGGATGAGTCGATGTGGAGAATGGACTTGGTTTTCACCATGGCCCTGATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB625721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCGAATCATTACCATGGTACCCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCCGCACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTCGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAATGTTTAAAATGCTCCGTTCATTTCTAATAAAAAga       ]
[-] EMBL CB650969             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCGAATCATTACCATGGTAACCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCTGCACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGCTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAAaaaaa                                     ]
[-] EMBL CB620450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCTCCGCACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTCGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTGGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGTCAAAGAGCAATAATGTTTAAAATGCTCCGTTCATTTCTttataggga        ]
[-] EMBL CB618553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGCTTTGGATATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTAACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTCGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTGGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTCCTCATAGGGCAATAATGTT                                      ]
[+] EMBL CB001031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAATGTTTAAAATGCTCCGTTCATTTCTAAAAAAAAAAAAAAAAA]
[+] EMBL CB000765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAATGTTTAAAATGC                              ]
[+] EMBL CB001011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCT GTTCCTTCAGCAGCGGTTTGGAGGCGCTTTC TTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAATGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAATAATGTTTAAAATGCTCCGTTCATTTCTANNAAAAAAAAAAAAAA]
[+] EMBL AU033009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tnGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCTAGTTCCTTCAGCAGCGGTTTGGAGGCGCTTTCTTTCATTTGTTCGAAGNNNNNNAAGGCAANTGAATATGAAATGGTTTCCACAGTNAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGTTTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAAAAAaa                                        ]




>consensus_13846#0
TGAATTCGGGACCATCCCGTGCGGATTTGGCGGTGGGTGAGTGTGGGATTGGGATGAGCT
TCTGGTTCCCCGCTGTGTGGTCACTACAGGAACGGAGCTTTGCTGCAGGTTTGGTCTGGA
ACACGAGCCTGAAGAGCGGTGAGGGCATAGCTGCAAGCTCCAACACAATAGCTCCATACT
TTAGGGGAAGTCTTTCGGGTCTGAAGTATAACTACACCAAGGTTGATGAGGCAAAGAAGT
ATTATGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCAT
ATCGGGACTTAACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCTCTGGATATGCATCAC
CAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCT
ATCATATAATGAAAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATG
TCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATG
ATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACT
GTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCA
AGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACA
TTGCTTCGTATGGGTTGTACATAGACAAAGTGGATGAGTCGATGTGGAGAATGGACTTGG
AAAGCACCATGGCCCTGATCTCGATGACACTATCCTGTTTGTTCATTGCTGTGCAACTGT
TCCATGTCAAGAAGGTTCCTGAAGCGCTTCCTGCCATGTCAATCACCATGCTTGTAGTTC
TCTCTTTGGGTTACATGATACCTCTTGTGTTGAACTTTGAGGCCCTCTTCAAGAACAGTA
ACAAACAGACATTTCCACTTTCAGGTGGTGGTTGGCTTGAGGTGAATGAAGTCATTGTGC
GAATCATTACCATGGTAACCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCTG
CACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGA
TATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTA
ACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCAT
TCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGG
TTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTG
GAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTG
TGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTTG
CATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCTGTTCCTTCAGC
AGCGGTTTGGAGGCGCTTTCTTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAA
TGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGT
TTCTATAGGCTAAGAAATAGGTTGCTTCTTATGTCTATGTTTGCTTTACACACTTACATA
CCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCAA
TAATGTTTAAAATGCTCCGTTCATTTCTAAAAAAAAAAAAAAAAA

consensusID : consensus_13846#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence

                              [AGCTTGGGTTTTTCACATGCAATTTAACAACTTCCGAAGGATGTTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATTTTAAACGCATGGTTAGGCTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGATAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTTTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTTTTCTGTTCCTTCAGCAGCGGTTTGGAGGCGCTTTTTTCATTTGTTTGAAGACCAGGATGGCAAATGCCGCCGCCGCCCGCGAGGTCGGGCGCGGAGGGGAGGCCGTGGCAGTGATCCGAGTAGGTTGCCGCCGCCGCCACCGTGGCAGGGACCAGCAGGAGGAGTACGGCAACGAGGAGGAGGTGGTTAGGGTTTGGATCGCGGCGCGGCGGCGCCATTTGGGAGGAGGCGGAGTTGT]

[-] EMBL CB650968             [AGCTTGGGTTTTTCACATGCAATTTAACAACTTCCGAAGGATGTTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGGTTATTTTAAACGCATGGTTAGGCTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGATAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTTTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTTTTCTGTTCCTTCAGCAGCGGTTTGGAGGCGCTTTTTTCATTTGTTTGAAGACCAGGATGGCAAATGCCGCCGCCGCCCGCGAGGTCGGGCGCGGAGGGGAGGCCGTGGCAGTGATCCGAGTAGGTTGCCGCCGCCGCCACCGTGGCAGGGACCAGCAGGAGGAGTACGGCAACGAGGAGGAGGTGGTTAGGGTTTGGATCGCGGCGCGGCGGCGCCATTTGGGAGGAGGCGGAGTTGT]




>consensus_13846#1
AGCTTGGGTTTTTCACATGCAATTTAACAACTTCCGAAGGATGTTTAGAAAGGTTGCTCG
CTTACCTCGGGTTAATAGACATGCATTCTGGGAGGACCTTGTGTCATATGGGGGATTAAT
ACTCGACGGGTTCTTGCTCCCTCAGGTTATTTTAAACGCATGGTTAGGCTCCAAAGTGAA
GGCACTTTCCCCGGGATTTTACATTGGAAGCACCATGATTCGTGCGCTACCTCATGTGTA
TGATGTGTTCAGGGATAAGCATTTTGTGCCCAGCTTGAGACCATTTTACAGGTATGCAAA
CCCTCGCGATGATCTTTTCAGCCTTGCATGGGACATTGCCATACCATGTGGAGCAATACT
GCTGTCGGTTTTTCTGTTCCTTCAGCAGCGGTTTGGAGGCGCTTTTTTCATTTGTTTGAA
GACCAGGATGGCAAATGCCGCCGCCGCCCGCGAGGTCGGGCGCGGAGGGGAGGCCGTGGC
AGTGATCCGAGTAGGTTGCCGCCGCCGCCACCGTGGCAGGGACCAGCAGGAGGAGTACGG
CAACGAGGAGGAGGTGGTTAGGGTTTGGATCGCGGCGCGGCGGCGCCATTTGGGAGGAGG
CGGAGTTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13846#0      TGAATTCGGGACCATCCCGTGCGGATTTGGCGGTGGGTGAGTGTGGGATTGGGATGAGCT 60
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TCTGGTTCCCCGCTGTGTGGTCACTACAGGAACGGAGCTTTGCTGCAGGTTTGGTCTGGA 120
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ACACGAGCCTGAAGAGCGGTGAGGGCATAGCTGCAAGCTCCAACACAATAGCTCCATACT 180
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TTAGGGGAAGTCTTTCGGGTCTGAAGTATAACTACACCAAGGTTGATGAGGCAAAGAAGT 240
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ATTATGAGAAGTATGGCTTGAACAAGAAGAGAAAGGGAAAGTTCCCTGATAGCAATTCAT 300
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ATCGGGACTTAACATTCCGGTTCTTCTTGCAGAAAGGAGGGGGCTCTGGATATGCATCAC 360
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      CAGTCACAATTGGGTCAATGCTATATGATGGGAACTCTTTGGTTGATTCAGATCATTCCT 420
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ATCATATAATGAAAGAGACGAATCATAGGTTACTTAATGTCAGCTATGACATTCACTATG 480
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TCGGGAATTGGTCGCTAGAAACATTTCGCCGTCAGCATATCTCTGCAGAGGGTGTTTATG 540
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ATGCTAAGACAGGCTCCTTGTGTATGATTGCTTGTCGGGTGGTTAATATCTCGTTGGACT 600
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      GTGAAATTCTTGTAACTGCTCAGTTTTCTCCTTTGGATACAAAAGTAGCACAGCATGTCA 660
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      AGGGGACAATTAGAAGCTTGAGGAAGAAGACTGACCCTCTTTTCTTTGAACCGCTGGACA 720
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TTGCTTCGTATGGGTTGTACATAGACAAAGTGGATGAGTCGATGTGGAGAATGGACTTGG 780
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      AAAGCACCATGGCCCTGATCTCGATGACACTATCCTGTTTGTTCATTGCTGTGCAACTGT 840
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TCCATGTCAAGAAGGTTCCTGAAGCGCTTCCTGCCATGTCAATCACCATGCTTGTAGTTC 900
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TCTCTTTGGGTTACATGATACCTCTTGTGTTGAACTTTGAGGCCCTCTTCAAGAACAGTA 960
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      ACAAACAGACATTTCCACTTTCAGGTGGTGGTTGGCTTGAGGTGAATGAAGTCATTGTGC 1020
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      GAATCATTACCATGGTAACCTTTCTGATGCAGTTACGACTTCTTCAATTGGCATGCTCTG 1080
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      CACGTTCCATGGATGTAAGCAAAGATCAATCATGGGCTGCTGAGAAGAAAGTGCTTTGGA 1140
consensus_13846#1      ------------------------------------------------------------
                                                                                   

consensus_13846#0      TATGCTTGCCACTGTACATTATAGGTGCAGTCGCAGCTTGGGTTGTTCACATGCAATTTA 1200
consensus_13846#1      ----------------------------------AGCTTGGGTTTTTCACATGCAATTTA 26
                                                         ********** ***************

consensus_13846#0      ACAACAACCGAAGGATGCTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCAT 1260
consensus_13846#1      ACAACTTCCGAAGGATGTTTAGAAAGGTTGCTCGCTTACCTCGGGTTAATAGACATGCAT 86
                       *****  ********** ******************************************

consensus_13846#0      TCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGG 1320
consensus_13846#1      TCTGGGAGGACCTTGTGTCATATGGGGGATTAATACTCGACGGGTTCTTGCTCCCTCAGG 146
                       ************************************************************

consensus_13846#0      TTATCTTAAACGCATGCTTAGGTTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTG 1380
consensus_13846#1      TTATTTTAAACGCATGGTTAGGCTCCAAAGTGAAGGCACTTTCCCCGGGATTTTACATTG 206
                       **** *********** ***** *************************************

consensus_13846#0      GAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGCTAAGCATTTTG 1440
consensus_13846#1      GAAGCACCATGATTCGTGCGCTACCTCATGTGTATGATGTGTTCAGGGATAAGCATTTTG 266
                       ************************************************ ***********

consensus_13846#0      TGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTCTTCAGCCTTG 1500
consensus_13846#1      TGCCCAGCTTGAGACCATTTTACAGGTATGCAAACCCTCGCGATGATCTTTTCAGCCTTG 326
                       ************************************************* **********

consensus_13846#0      CATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTCTTCTGTTCCTTCAGC 1560
consensus_13846#1      CATGGGACATTGCCATACCATGTGGAGCAATACTGCTGTCGGTTTTTCTGTTCCTTCAGC 386
                       ******************************************** ***************

consensus_13846#0      AGCGGTTTGGAGGCGCTTTCTTCATTTGTTCGAAGAACAGGAAGGCAAGTGAATATGAAA 1620
consensus_13846#1      AGCGGTTTGGAGGCGCTTTTTTCATTTGTTTGAAGACCAGGATGGCAAATG---CCGCCG 443
                       ******************* ********** ***** ***** ***** **     *   

consensus_13846#0      TGGTTTCCACAGTTAGCTCTTAACAAGTTTTCATCTGTGCAAGAGAAATATAGAGAAGGT 1680
consensus_13846#1      CCGCCCGCGAGGTCGGGCGCGGAGGGGA----GGCCGTGGCAGTGATCCGAGTAGGTTGC 499
                         *    *   **  *      *   *       * ***  ** **       **   * 

consensus_13846#0      TTCTATAGGCTAAGAAATAGGTTGCTTCTT-ATGTCTATGTTTGCTTTACACACTTACAT 1739
consensus_13846#1      CGCCGCCGCCACCGTGGCAGGGACCAGCAGGAGGAGTACGGCAACGAGGAGGAGGTGGTT 559
                         *    * *   *    ***   *  *   * *  ** *    *       *  *   *

consensus_13846#0      ACCTGCCTTGTTGAAGCAAAATTACATACAAAAGAAGCTATTCAGGTTGGGCATTCAGCA 1799
consensus_13846#1      AGGGTTTGGATCGCGGCGCGGCGGCGCCATTTGGGAGGAGGCGGAGTTGT---------- 609
                       *         * *  **       *        * **        ****           

consensus_13846#0      ATAATGTTTAAAATGCTCCGTTCATTTCTAAAAAAAAAAAAAAAAA 1845
consensus_13846#1      ----------------------------------------------