cluster # 13883

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Oryza sativa
cluster # 13883 cluster # 13883 Sequences # 14 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13883#0 length = 1496 sequences # 1
consensus_13883#1 length = 1225 sequences # 8

consensus_13883#2 length = 1106 sequences # 2
consensus_13883#3 length = 520 sequences # 1
consensus_13883#4 length = 316 sequences # 2

consensusID : consensus_13883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1496
fasta sequence

                              [CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGTATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGATTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTGATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG]

[+] EMBL AK106322             [CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGTATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGATTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTGATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG]




>consensus_13883#0
CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCT
CTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGG
CGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGC
CGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCAT
CTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGT
GCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTC
CAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCC
CGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGT
GCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCA
GCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGC
CCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGA
GTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTT
CCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAG
TGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCT
GAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGC
ATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGT
ATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGA
TTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTG
ATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGC
TCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGC
AGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCAT
ACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATA
TAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAA
TGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGC
TCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG

consensusID : consensus_13883#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1225
fasta sequence

                              [CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA-GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG-CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG-CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATACGCATGCT]

[+] EMBL AK058481             [CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTG                                  ]
[+] EMBL AK102579             [                    CCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTC                                                            ]
[+] EMBL AK099100             [                      TCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAGCATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCAACCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTT                                                        ]
[+] EMBL CB685339             [                           ACCCCCCTAGAGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCCGCGCCCGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK061324             [                                                                          TCTCTCTCTGCTAGGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATACGCATGCT]
[+] EMBL CA756360             [                                                                                                                                                                                                              GCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACNAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCTTCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCANCANGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCCAGGCTGAGCAGGAAAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTC                                                            ]
[+] EMBL BG101700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GACAATGGCCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTA                                                                  ]




>consensus_13883#1
CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCA
CTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAG
ACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAA
GGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGA
CGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGG
CGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCAC
GCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCAC
CCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGG
CCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGT
CGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCG
CGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCAC
CCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCA
GGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCAT
CGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGC
TGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCT
GGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGG
CCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCC
CAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTG
CTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATC
CAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTT
TATGTTGCTGTTCAATACGCATGCT

consensusID : consensus_13883#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1106
fasta sequence

                              [TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCACTGCAATGCAGGAATCTTATATTTAG]

[+] EMBL AK108467             [TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCACTGCAATGCAGGAATCTTATAT    ]
[+] EMBL CA764231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aaGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACTACTGCAATGCAGGAATCTTATATTTAG]




>consensus_13883#2
TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCC
GGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTG
GGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCC
GTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTC
ATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTC
TCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCG
CGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAG
AAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCC
GACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGC
CGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGC
CCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCC
AGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGG
GAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATC
GAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAAT
GTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGG
TGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCAC
TTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATT
GCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCA
CTGCAATGCAGGAATCTTATATTTAG

consensusID : consensus_13883#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 520
fasta sequence

                              [ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCAAGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNGNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGGTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGCGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANANGTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA]

[-] EMBL AA754503             [ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCAAGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNGNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGGTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGCGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANANGTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA]




>consensus_13883#3
ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCA
AGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNG
NNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGG
TCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGC
GGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTT
CGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCC
GTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAAC
TCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANAN
GTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA

consensusID : consensus_13883#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 316
fasta sequence

                              [GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGA]

[+] EMBL CF330083             [GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAA                                             ]
[-] EMBL CF330084             [ GCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGA]




>consensus_13883#4
GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGG
GGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCAC
TCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGA
TGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAA
CGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTA
CGTAGCGTATCGTTGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13883#0      ----------------------------------------------------------CT 2
consensus_13883#3      ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCA 60
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      -------------------------------------CTCATCAGATCCACACCCATCCT 23
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCT 62
consensus_13883#3      AGCCACCCCCCAAGNGG-GGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNN 119
consensus_13883#2      --------------------------------------TTCCCAAACAATCCCCCACCGG 22
consensus_13883#1      CCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCT 83
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCG 122
consensus_13883#3      GNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCG 179
consensus_13883#2      AAAAGCAGGCGAACCCCCAT-------CCATCGGGATCCATG-----GCC---GGCGGCG 67
consensus_13883#1      GCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCG 143
consensus_13883#4      ----------------------------------GGCCAGGGAGATTGCT--GCCGAGCT 24
                                                                *     **        ** 

consensus_13883#0      GTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCG 182
consensus_13883#3      GTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCG 239
consensus_13883#2      GGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCG 127
consensus_13883#1      GTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCG 203
consensus_13883#4      GGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGAT---GCTGCT 81
                       * *  *          *      *      *      * *   *** **     **  * 

consensus_13883#0      CGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 242
consensus_13883#3      CGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 299
consensus_13883#2      CGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCT 187
consensus_13883#1      CGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 263
consensus_13883#4      CGGCCTCAACGCTGCCGGGTTCGGCCGGTG--ATCCGTCACTCCAATTTTACCCCTTTAG 139
                       **** **      *  *    **          *      *    *     **    *  

consensus_13883#0      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 297
consensus_13883#3      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 354
consensus_13883#2      TCGACCGGT--TCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCC---ACTTCAT 242
consensus_13883#1      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 318
consensus_13883#4      TTGCCCAGGCATCCGCTCTGTGTTACATTAAACTG-GAATGATGGTATGGGGAATTATGT 198
                       * * ** *   *****   *** * *   * **       ** ** *      * *   *

consensus_13883#0      CGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTC 357
consensus_13883#3      CGTGCCGTGGCTCCAGAAGCCNTT-GTCTTGGACATCCGCACGCGCCCCCACAACTTNTC 413
consensus_13883#2      CGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTC 302
consensus_13883#1      CGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTC 378
consensus_13883#4      TATCTGCTACTTTTGGTAATATTT-ANTCTGGATGTCT--------TTGAACGGAATGTG 249
                         *    *   *   * *    **     * **  **             **    * * 

consensus_13883#0      CTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCG 417
consensus_13883#3      CTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCG 473
consensus_13883#2      CTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCG 362
consensus_13883#1      CTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCG 438
consensus_13883#4      CTA-ATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGC----CGTTACGTA 304
                       **  * **  *  * * *  *     * *     * *     * * *    * *  *   

consensus_13883#0      CCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAA 477
consensus_13883#3      CCCANANGTCGTGTACCTCCCC-TGGTGCCGAATTCGGCAGTGCTCAA------------ 520
consensus_13883#2      CCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAA 422
consensus_13883#1      CCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAA 498
consensus_13883#4      GCGTATCGTTGA------------------------------------------------ 316
                        *      * *                                                 

consensus_13883#0      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 537
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 482
consensus_13883#1      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 558
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCG 597
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCG 542
consensus_13883#1      CCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCG 618
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCAT 657
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCC 602
consensus_13883#1      CGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCAT 678
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAA 717
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAG 662
consensus_13883#1      CGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAA 738
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGA 777
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGA 722
consensus_13883#1      GTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGA 798
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGA 837
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGA 782
consensus_13883#1      GAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGA 858
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGT 897
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGT 842
consensus_13883#1      GCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGT 918
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGG- 956
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGT- 901
consensus_13883#1      TGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTT 978
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      -GTGTATCTT-TGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAG 1014
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      -GAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCAC 960
consensus_13883#1      CGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGT 1038
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GGATGATTATCT-AGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCT 1073
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      TTCATGGTATTA-TTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAAT 1019
consensus_13883#1      TACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTT 1098
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTCGGTGATAATATTCTTTGATTTGTG-GCTCATATGCTGTTGTTCTTAAGCAACCGTGT 1132
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      TGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACC 1079
consensus_13883#1      AGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTG-TGATCCAAATAAGTTCTGGGTC 1157
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATAT 1192
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ACTGCAATGCAGGAATCTTATATTTAG--------------------------------- 1106
consensus_13883#1      TAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATA 1217
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGAT 1252
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      CGCATGCT---------------------------------------------------- 1225
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGG 1312
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACAT 1372
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAG 1432
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTG 1492
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTGG 1496
consensus_13883#3      ----
consensus_13883#2      ----
consensus_13883#1      ----
consensus_13883#4      ----