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Oryza sativa
cluster # 14038 cluster # 14038       Sequences # 15       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14038#0 length = 2400 sequences # 14  
 consensus_14038#1 length = 378 sequences # 1  
consensusID : consensus_14038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 2400
fasta sequence 
                              [GGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATATTGGGATTTCAAGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGCCACAAGAGAAGAGCTTCTAACTGATAGGCTTCTTACTGCTACAGTGGCATGGCCTGCTCCAGCAGTGATTTATATTGGTATTATTTTGTCTACTTTAGGCGCAGCACTGCAGAGTTTGACAGGGGCTCCAAGATTACTGGCAGCAATAGCAAATGATGACATTCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGGGCTGAGCCTCACTCAGCCACTTTATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATTGGCAACTTGGATTTGATTACGCCCACCATCACAATGTTTTTCCTTCTGTGCTACGCTGGTGTGAACCTGTCATGCTTTCTCCTTGACCTCCTTGATGCTCCTAGTTGGCGCCCTCGTTGGAAATTTCACCATTGGAGTTTATCACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTTTTGATATCCTGGTCTTTTACTGTTGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTATGTGAGCTTAAAAGGTAAGGCTGGAGACTGGGGAGATGGATTTAAGAGTGCATACTTTCAATTGGCACTACGAAGTCTCAGATCATTAGGAGCAAACCAAGTGCATCCTAAGAATTGGTACCCCATTCCTCTGATATTCTGCCGTCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCATCCAAAGCTTGCAGATTTTGCCAACTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTCGTCTCGATTATTGACGGTGATTATCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGG-TCATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACA-TTCTTCACATGATTAGAGATGTATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAG-CAAAGTGGGCA-AGCA-GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT-CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC-AAATTTTGTAG-CCCTGGTGTTCCCCATACGTGTAACA-ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAAATTATTGGTANC-----AAAAAAAAAAAAAAAAAA]

[+] EMBL CB626962             [GGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATATTGGGATTTCAAGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGCCACAAGAGAAGAGCTTCTAACTGATAGGCTTCTTACTGCTACAGTGGCATGGCCTGCTCCAGCAGTGATTTATATTGGTATTATTTTGTCTACTTTAGGCGCAGCACTGCAGAGTTTGACAGGGGCTCCAAGATTACTGGCAGCAATAGCAAATGATGACATTCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGGGCTGAGCCTCACTCAGCCACTTTATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATTGGCAACTTGGATTTGATTACGCCCACCATCACAATGTTTTTCCTTCTGTGCTACGCTGGTGTGAACCTGTCATGCTTTCTCCTTGACCTCCTTGATGCTCCTAGTTGGCGCCCTCGTTGGAAATTTCACCATTGGAGTTTATCACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTTTTGATATCCTGGTCTTTTACTGTTGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTATGTGAGCTTAAAAGGTAAGGCTGGAGACTGGGGAGATGGATTTAAGAGTGCATACTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB682639             [                                                                                                                                                                                                                                                                                                                                                                                 CAGCACTATCAAATGATGACATTCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGGGCTGAGCCTCACTCAGCCACTTTATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATTGGCAACTTGGATTTGATTACGCCCACCATCACAATGTTTTTCCTTCTGTGCTATGCTGGTGTGAACCTGTCATGCTTTCTCCTTGACCTCCTTGATGCTCCTAGTTGGCGTCCTCGTTGGAAATTTCACCATTGGAGTTTATCACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTTTTGATATCCTGGTCTTTTACTGTTGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTATGTGAGCTTAAAAGGTAAGGCTGGAGACTGGGGAGATGGATTTAAGAGTGCATACTTTCAATTGGCACTACGAAGTCTCAGATCATTAGGAGCAAACCAAGTGCATCCTAAGAATTGGTACCCCATTCCTCTGATATTCTGCCGTCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCATCCAAAGCTTGCAGATTTTGCCAACTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTCGTCTCGATTATTGACGGTGATTATCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCAGGGGTCTAGGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB660551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCAAACCAAGTGCATCCTTTTAATTGGTACCCCATTCCTCTGATATTCTGCCGTCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCATCCAAAGCTTGCAGATTTTGCCAACTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTCGTCTCGATTATTGACGGTGATTATCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCCAATGCATGCTGAGG TCATCGTCGTGACTATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA998487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK060470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGG TCATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACA TTCTTCACATGATTAGAGATGTATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGA                                    ]
[+] EMBL C96646               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAA GCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGGNGCATCGTCGTGACTATGAAtnca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB000650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGG TCATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB682640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGG TCATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACA TTCTTCACATGATTAGAGATGTATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCC                                                                                                                                 ]
[-] EMBL CB626963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGATCAGCACATACCTCTCTGAGATGAAGGAAACCGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACA TTCTTCACATGATTAGAGATGTATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAA                                   ]
[-] EMBL CB649600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAACTGCCCAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTTGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACA TTCTTCACATGATTAGAGATGTATACCTTTTGGCGGCTTTACTGCCATATGATTGTTGTAACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCCCCTTGAAGGTTACCTACCCTGAGATAGGAGATTTGGTGGGCCTTTCGTTGGCATATTGGGTACGTCAACTACAGTATGTCCATTTTTTTTTT CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATTTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGAGGTTTATACTGATACACGTGAAAGTCAGCTGAA                                   ]
[-] EMBL CB660552             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGTCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTGGTCACA TTGTTCACATGATTAGAGAGGTATACCTTCTGGCGGCTCTACTGCCATATGGTTGTTGTGACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATGTGCTGGGCCTTTCGGTGGCATATGGGGTACGTCAACTACAGTATGTCCATTCTTTTTGTGGGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG                                                                                                                                                                                                                                      ]
[+] EMBL BI810867             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACGCATGTTGATA TTAGGGGATACAGAAGAGATGTTGTCACACTTCTTCACATGATTAGAGATGTATACCTTCT GCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAGCCAACGTGGGCACAGCACGATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT CGGATTCACATAGCAAGTTTCAATACAGTTAATTGTCACAAAATTTTGTAGCCCCTGGTGTTCCCCATACGTGTAACACATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGC ATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGC AACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAAATTATTGGTA       AAAAAAAAA         ]
[+] EMBL AU166285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTGTAACATCATCATAG CAAAGTGGGCA AGCA GATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCT CGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCAC AAATTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAAATTATTGGTANC     AAAAAAAAAAAAA     ]
[-] EMBL CA757957             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTTGTAG CCCTGGTGTTCCCCATACGTGTAACA ATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAAATTATTGGTAACCCTGTAAAAAAAAAAAAAAAAAA]




>consensus_14038#0
GGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATA
TTGGGATTTCAAGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGAT
CGGCTTCACTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTA
CAACAACTGCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGCCACAAGAGAAG
AGCTTCTAACTGATAGGCTTCTTACTGCTACAGTGGCATGGCCTGCTCCAGCAGTGATTT
ATATTGGTATTATTTTGTCTACTTTAGGCGCAGCACTGCAGAGTTTGACAGGGGCTCCAA
GATTACTGGCAGCAATAGCAAATGATGACATTCTTCCAGTTCTTAATTACTTCAAGGTTT
CTGAAGGGGCTGAGCCTCACTCAGCCACTTTATTCACAGCTTTCATTTGTATCTGCTGTG
TGGTTATTGGCAACTTGGATTTGATTACGCCCACCATCACAATGTTTTTCCTTCTGTGCT
ACGCTGGTGTGAACCTGTCATGCTTTCTCCTTGACCTCCTTGATGCTCCTAGTTGGCGCC
CTCGTTGGAAATTTCACCATTGGAGTTTATCACTTGTTGGTGCATTGCTTTGTGTTGTGA
TCATGTTTTTGATATCCTGGTCTTTTACTGTTGTCTCCCTTGCCCTTGCAAGCCTCATCT
ATTACTATGTGAGCTTAAAAGGTAAGGCTGGAGACTGGGGAGATGGATTTAAGAGTGCAT
ACTTTCAATTGGCACTACGAAGTCTCAGATCATTAGGAGCAAACCAAGTGCATCCTAAGA
ATTGGTACCCCATTCCTCTGATATTCTGCCGTCCTTGGGGTAAACTTCCAGAAAATGTAC
CTTGTCATCCAAAGCTTGCAGATTTTGCCAACTGTATGAAGAAGAAGGGGCGTGGTATGT
CAATTTTCGTCTCGATTATTGACGGTGATTATCATGAACTGGCCGAGGATGCAAAGACTG
CTTGTCGTCAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTA
TTGTAGCGCCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTA
ACTTGAAGCCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGA
TACAGATACCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCG
TTGTCATTGTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTA
TTGACCTCTACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGC
TCACAAAAGAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATA
CTGATGCTGAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATG
CTGAGGTCATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTG
GTGCTCCACAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACAT
ACCTCTCTGAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAA
AGCAAGTAGTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGA
ACTCGACAATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCAC
CACCATTAAATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACG
TCCCACGCATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACATTCTTCACATGAT
TAGAGATGTATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAGC
AAAGTGGGCAAGCAGATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTG
AAGGCTACCTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGT
CAACTACAGTATGTCCATTCTTTTTCTCGGATTCACATAGCAAGCTTCAATACAGTTAAT
TGTCACAAATTTTGTAGCCCTGGTGTTCCCCATACGTGTAACAATCTTAGAAACGCAACG
CTTCCTTTTGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTT
GATGTAATGAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGT
TTATACTGATACACGTGAAAATCAGCTGAAATTATTGGTANCAAAAAAAAAAAAAAAAAA

consensusID : consensus_14038#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 378
fasta sequence 
                              [CAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTCTTTTCACTGTTGTGCATTTATCTTGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAGGGAATTACTGGGTTGAGTATAACCACATTTAAGGACAACTGGGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATATTGGGATTTCAATGCTTTGGTAGGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGC]

[+] EMBL AU067849             [CAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTCTTTTCACTGTTGTGCATTTATCTTGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAGGGAATTACTGGGTTGAGTATAACCACATTTAAGGACAACTGGGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATATTGGGATTTCAATGCTTTGGTAGGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGC]




>consensus_14038#1
CAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTCTTTTCACTGTTGTGCATTTATCT
TGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAGGGAATTACTGGGTTGAGTATAAC
CACATTTAAGGACAACTGGGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGA
TCCAAATGGCTCCATATATTGGGATTTCAATGCTTTGGTAGGCCTCTTTTTCCCAGCAGT
GACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAAT
ACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCT
TCTATTTGGAGCCTTGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14038#0      ------------------------------------------------------------
consensus_14038#1      CAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTCTTTTCACTGTTGTGCATTTATCT 60
                                                                                   

consensus_14038#0      ------------------------------------------------------------
consensus_14038#1      TGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAGGGAATTACTGGGTTGAGTATAAC 120
                                                                                   

consensus_14038#0      ------------------GGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGA 42
consensus_14038#1      CACATTTAAGGACAACTGGGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCTGA 180
                                         ******************************************

consensus_14038#0      TCCAAATGGCTCCATATATTGGGATTTCAA-----------GCCTCTTTTTCCCAGCAGT 91
consensus_14038#1      TCCAAATGGCTCCATATATTGGGATTTCAATGCTTTGGTAGGCCTCTTTTTCCCAGCAGT 240
                       ******************************           *******************

consensus_14038#0      GACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAAT 151
consensus_14038#1      GACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCAAT 300
                       ************************************************************

consensus_14038#0      ACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCT 211
consensus_14038#1      ACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTCCT 360
                       ************************************************************

consensus_14038#0      TCTATTTGGAGCCTTGGCCACAAGAGAAGAGCTTCTAACTGATAGGCTTCTTACTGCTAC 271
consensus_14038#1      TCTATTTGGAGCCTTGGC------------------------------------------ 378
                       ******************                                          

consensus_14038#0      AGTGGCATGGCCTGCTCCAGCAGTGATTTATATTGGTATTATTTTGTCTACTTTAGGCGC 331
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AGCACTGCAGAGTTTGACAGGGGCTCCAAGATTACTGGCAGCAATAGCAAATGATGACAT 391
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGGGCTGAGCCTCACTCAGCCACTTT 451
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATTGGCAACTTGGATTTGATTACGCC 511
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CACCATCACAATGTTTTTCCTTCTGTGCTACGCTGGTGTGAACCTGTCATGCTTTCTCCT 571
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TGACCTCCTTGATGCTCCTAGTTGGCGCCCTCGTTGGAAATTTCACCATTGGAGTTTATC 631
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTTTTGATATCCTGGTCTTTTACTGT 691
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTATGTGAGCTTAAAAGGTAAGGCTGG 751
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AGACTGGGGAGATGGATTTAAGAGTGCATACTTTCAATTGGCACTACGAAGTCTCAGATC 811
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ATTAGGAGCAAACCAAGTGCATCCTAAGAATTGGTACCCCATTCCTCTGATATTCTGCCG 871
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCATCCAAAGCTTGCAGATTTTGCCAA 931
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTCGTCTCGATTATTGACGGTGATTA 991
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAGTA 1051
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTCCG 1111
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGGTA 1171
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATAAT 1231
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGGCC 1291
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGAGG 1351
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAAAT 1411
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTCAA 1471
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AAAGTTCTTGTATGATCTTCGAATGCATGCTGAGGTCATCGTCGTGACTATGAAGTCATG 1531
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      GGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCTTA 1591
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAAAG 1651
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATTGA 1711
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      GAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATGGC 1771
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTACAT 1831
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      GGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATACAG 1891
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      AAGAGATGTTGTCACATTCTTCACATGATTAGAGATGTATACCTTCTGGCGGCTCTACTG 1951
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      CCATATGATTGTTGTAACATCATCATAGCAAAGTGGGCAAGCAGATTTTGTGCAGATTTT 2011
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTACCTACCCTGAGATAGGAGATCTGC 2071
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACAGTATGTCCATTCTTTTTCTCGGA 2131
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TTCACATAGCAAGCTTCAATACAGTTAATTGTCACAAATTTTGTAGCCCTGGTGTTCCCC 2191
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ATACGTGTAACAATCTTAGAAACGCAACGCTTCCTTTTGCACTGAAACAGTAGCAATGGT 2251
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      ATCACATTTTTTAAAATATATTTCCAGTTGATGTAATGAGCAAACTGAGGTGGCCATTAA 2311
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TGTTGGCATGTTGTTGATTGGCATGACGTTTATACTGATACACGTGAAAATCAGCTGAAA 2371
consensus_14038#1      ------------------------------------------------------------
                                                                                   

consensus_14038#0      TTATTGGTANCAAAAAAAAAAAAAAAAAA 2400
consensus_14038#1      -----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)