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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14073#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2333 fasta sequence
[CCCTCCTAAGGGAATAAGCTTGCGGCCGCAGCGCGTGGGTTCCCAAATCGCGAAATTTTC-TTTTCCCCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTTCTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTAAATCTGATATTTACTGGTGGTAATGACTCTGTGATCCGAATGTGGGACTTGGAGGAAGGGCTTTTGATTGATAAGTCCCGCCCACTTTGTTGCACCATCCGGGCCATTGCAGCTGACACTAGGCTTTTGGTCACTGCAGGAACCAATGCCTTTATTCATTGTTGGAGGGCTGTTGAAGGTAATTCTTACCCTTTCCACATCTCTGGGAATGGCACTGACCAGAGTCCTGAGTTTCGCCTTTGGGGGCATGAAGGACCTGTGACTTGTCTTGCCTTGGATTCATTGAGGATTTTCAGTGGTAGCTGGGATATGACTGTCCGTGTTTGGGACAGATCCGAAATGAAATGTGTTCAGAAGTTCATGCATGCAGATTGGGTTTGGAGCGTGGCACCTCATGGAAATACTGTTGCCAGTACAGCTGGTAGGGATGCCTATGTATGGGATATCAGGAGTGGTGAGTTGGAAAATGTTATTTCCAATGCCCATTATGGTAATGCATTTTCTTTAGCTCGAACACACCTAGCTGATGTGCTGTTTACCGGAGGAGAGGATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG-CGAGGATGGCGCTGTC-AAAGTCTGGAACTTCT-CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT-GAGGCGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAG-CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATGCAATTCTTATTCGATATGGCATATATTGATCTAACAGAAGCTCTCATTGTCTTACTGTTTTGAGCTCTAGTTGCATTTGGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATGAATGGGAATCTACATTGAACTATTCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCTGGATTCTTAGAACATTACTTTTGCTGTTACGTGGTCTGCAATAAGAAAATCCTGCATTCCGACTCAAAAAAAAAAAAAAAA]
[+] EMBL BI305332 [CCCTCCTAAGGGAATAAGCTTGCGGCCGCAGCGCGTGGGTTCCCAAATCGCGAAATTTTCTTTTTCCCCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACGGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGT ]
[+] EMBL AK111585 [ CCCAAATCGCGAAATTTTC TTTTCCCCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTTCTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTAAATCTGATATTTACTGGTGGTAATGACTCTGTGATCCGAATGTGGGACTTGGAGGAAGGGCTTTTGATTGATAAGTCCCGCCCACTTTGTTGCACCATCCGGGCCATTGCAGCTGACACTAGGCTTTTGGTCACTGCAGGAACCAATGCCTTTATTCATTGTTGGAGGGCTGTTGAAGGTAATTCTTACCCTTTCCACATCTCTGGGAATGGCACTGACCAGAGTCCTGAGTTTCGCCTTTGGGGGCATGAAGGACCTGTGACTTGTCTTGCCTTGGATTCATTGAGGATTTTCAGTGGTAGCTGGGATATGACTGTCCGTGTTTGGGACAGATCCGAAATGAAATGTGTTCAGAAGTTCATGCATGCAGATTGGGTTTGGAGCGTGGCACCTCATGGAAATACTGTTGCCAGTACAGCTGGTAGGGATGCCTATGTATGGGATATCAGGAGTGGTGAGTTGGAAAATGTTATTTCCAATGCCCATTATGGTAATGCATTTTCTTTAGCTCGAACACACCTAGCTGATGTGCTGTTTACCGGAGGAGAGGATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG CGAGGATGGCGCTGTC AAAGTCTGGAACTTCT CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATGCAATTCTTATTCGATATGGCATATATTGATCTAACAGAAGCTCTCATTGTCTTACTGTTTTGAGCTCTAGTTGCATTTGGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATGAATGGGAATCTACATTGAACTATTCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCTGGATTCTTAGAACATTACTTTTGCTGTTACGTGGTCTGCAATAAGAAAATCCTGC ]
[+] EMBL D43026 [ TCCCCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATNTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTA TTTCCGACCCAAAGGAAAATGTTG AACAAGTGATGGTGAGACCGCCTCAAAGTGTGACT ]
[+] EMBL CB669292 [ ccttCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAAGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCTATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAACAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCATATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTTCTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTAGATC ]
[+] EMBL AU182222 [ GAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAA ]
[+] EMBL CB622818 [ GCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTTCTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTAAATCTGATATTTACTGGTGGTAATGACTCTGTGATCCGAATGTGGGACTTGGAGGAAGGGCTTTTGATTGATAAGTCCCGCCCACTTTGTTGCACCATCCGGGCCATTGCAGCTGACACTAGGCTTTTGGTCACTGCAGGAACCAATGCCTTTATTCATTGTTGGAGGGCTGTTGAAGGTAATTCTTACCCTTTCCACATCTCTGGGAATGGCACTGACCAGAGTCCTGAGTTTCGCCTTTGGGGGCATGAAGGACCTGTGACTTGTCTTGCCTTGGATTCATTGAGGATTTTCAGTGGTAGCTGGGATATGACTGTCCGTGTTTGGGACAGATCCGACATGAAATGTGTTCAGAAGTTCATGCATGCAGATTGCGTTTGGAGCGT ]
[+] EMBL C26424 [ TCATGCATGCAGATTGGGTTTGGAGCGTGGCACCTCATGGAAATACTGTTGCCAGTACAGCTGGTAGGGATGCCTATGTATGGGATATCAGGAGTGGTGAGTTGGAAAATGTTATTTCCAATGCCCATTATGGTAATGCATTTTCTTTAGCTCGAACACACCTAGCTGATGTGCTGTTTACCGGAGGAGAGGATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATC AAACAACCATTCAGGGTTAAG ACTTTGATCCAAG TCCA TGNACCTCCACAGAGA ]
[-] EMBL CB622819 [ CACACNTAGCTGATGTGCTGTTTACCGGAGGAGAGGATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG CGAGGATGGCGCTGTC AAAGTCTGGAACTTCT CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTCGTACCCTTCACAACTTTACACTCTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATGGTCAATTCTTATTCGATATGGCATATATTGATCTATTAAAAGCTCTCAT ]
[-] EMBL CB669293 [ GGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG CGAGGATGGCGCTGTC AAAGTCTGGAACTTCT CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATGCAATTCTTATTCGATATGGCATATATTGATCTAAAAAAAaaga ]
[-] EMBL CA760337 [ AGCTGCTACTTGGGTTCCACATACGNGCCCTGTTCATTCCCTCGCTTNTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCNCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG CGAGGATGGCGCTGTC AAAGTCTGGAACTTCT CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCCCAAGTAGAGATGAATGCAAATGGTAGAAGGTTTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGCGCCATCAATGATAAGGTCAAGTTTTAGATTAGGATTTGTACCCTTCACAACTTTACACTTTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAAaaaaaaaaa ]
[-] EMBL CA760338 [ GCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATNTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGG CGAGGATGGCGCTGTC AAAGTCTGGAACTTCT CAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCCCAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTCGTACCCTTCACAACTTTACACTCTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATTCAATTCTTATTCGATATGGCATATATTGATCTAAAAAAAaaaaaaaa ]
[+] EMBL AU100722 [ GTGGAGGCCGAGGATGGCCCTGTCAAAAGTCTGGAACTTCT CAGAAGCNCTGGAGATTGAGAAGAGGCCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCAT GAGGCGAAAAAAGGCACAAGTAGAGATGAATGC AATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAG CCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATGCAATTCTTATTCGATATGGCATATATTGATCTAACAGAAGCTCTCATTGTCTTACTGTTTTGAGCTCTAGTTGCATTTGGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATGAATGGGAATCTACATTGAACTATTCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCTGGATTCTTAGAACATTACTTTTGCTGTTACGTGGTCTGCAATAAGAAAATCCTGCATTCCGACTCAAAAAAAAAAAAAAA ]
[+] EMBL C98576 [ C AAAGTCTGGAACTTCTCCAGAGCCACTGGAGATTGAGAAGAGGGCAC AGCTCTAAGAAGTATGAGGCAGGAGAACCGCATGGAGGCG AAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCC TGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAGCCCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATGCAATTCTTATTCGATATGGCATATATTGATCTAACAGAAGCTCTCATTGTCTTACTGTTTTGAGCTCTAGTTGCATTTGGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATGAATGGGAATCTACATTGAACTATTCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCTGGATTCTTAGAACATTACTTTTGCTGTTACGTGGTCTGCAATAAGAAAATCCTGCATTCCGACTCAAAAAAAAAAAAAAAA]
consensusID : consensus_14073#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 164 fasta sequence
[TTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTTTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF327470 [TTCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTTTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14073#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 118 fasta sequence
[CCGGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATTCAATTCTTATTCGATATGGCATATATTGATCTNACAGAAGCTCTCATTGTCTAAAAAAAAAAA]
[+] EMBL BQ906859 [CCGGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGCATATTCAATTCTTATTCGATATGGCATATATTGATCTNACAGAAGCTCTCATTGTCTAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14073#0 CCCTCCTAAGGGAATAAGCTTGCGGCCGCAGCGCGTGGGTTCCCAAATCGCGAAATTTTC 60
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TTTTCCCCCAAAAAACCGAATAAAGAGAAATCTCTCCGAGCGAATTCGACGAGATCGGAG 120
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GCTCGGATCGAGGTATTCTCCTTCTGATTTGATTGGATTCGGGATCTGCTGGCGGGGATC 180
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CATCTTTAGGTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGAC 240
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TCTTCATCTGTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCC 300
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GTTTCTCACAACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAG 360
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TGCAGTTATGAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACC 420
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GCCTCAAAGTGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTG 480
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CTTGAACACCTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCAT 540
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 ACCCTAGCCACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCT 600
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 ACTCCTCCAGTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCT 660
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TGGAAAACATTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGT 720
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GTGGATGTTCTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTA 780
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 AATCTGATATTTACTGGTGGTAATGACTCTGTGATCCGAATGTGGGACTTGGAGGAAGGG 840
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CTTTTGATTGATAAGTCCCGCCCACTTTGTTGCACCATCCGGGCCATTGCAGCTGACACT 900
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 AGGCTTTTGGTCACTGCAGGAACCAATGCCTTTATTCATTGTTGGAGGGCTGTTGAAGGT 960
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 AATTCTTACCCTTTCCACATCTCTGGGAATGGCACTGACCAGAGTCCTGAGTTTCGCCTT 1020
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TGGGGGCATGAAGGACCTGTGACTTGTCTTGCCTTGGATTCATTGAGGATTTTCAGTGGT 1080
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 AGCTGGGATATGACTGTCCGTGTTTGGGACAGATCCGAAATGAAATGTGTTCAGAAGTTC 1140
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 ATGCATGCAGATTGGGTTTGGAGCGTGGCACCTCATGGAAATACTGTTGCCAGTACAGCT 1200
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GGTAGGGATGCCTATGTATGGGATATCAGGAGTGGTGAGTTGGAAAATGTTATTTCCAAT 1260
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GCCCATTATGGTAATGCATTTTCTTTAGCTCGAACACACCTAGCTGATGTGCTGTTTACC 1320
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 GGAGGAGAGGATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGAT 1380
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 ATTAAGCCAGCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAG 1440
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TATCCATGGCTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAG 1500
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CTTCTGACCCCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGT 1560
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TCCATTGAACCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCC 1620
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 ATTGGTGCAGACAGGATTGTCTGTGGAGGCGAGGATGGCGCTGTCAAAGTCTGGAACTTC 1680
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TCAGAAGCACTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAAC 1740
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CGCATGAGGCGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAA 1800
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TGTGGCTCAATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCAC 1860
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 AGCAAGCGTGCCATCAATGATAAGGTCAAGTCTTAGATTAGGATTTGTACCCTTCACAAC 1920
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 TTTACACTCTACAGTAGCCATGAGTTGATAGTTCTTTTCTTGGAAGTACCTTTGCTGATC 1980
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CCAATTAGGCTTGCTGTGTAGGTTAACATTGGCATTTTCACTATTGAATT--TTATAAGG 2038
consensus_14073#2 ------------------------------------------CCGGAATT--TTATAAGG 16
consensus_14073#1 ----------------------------------TTCTTTTCTTGGAAGTACCTTTGCTG 26
*** * * * *
consensus_14073#0 TTACCAATGCAG--TGTAGCCATGCATGAAATCCGCATATGCAATTCTTA-TTCGATATG 2095
consensus_14073#2 TTACCAATGCAG--TGTAGCCATGCATGAAATCCGCATATTCAATTCTTA-TTCGATATG 73
consensus_14073#1 ATCCCAATTAGGCTTGCTGTTTAGGTTAACATTGGCATTTTCACTATTGAATTTTATAAG 86
* ***** * ** * * * * ** **** * ** * * * ** *** *
consensus_14073#0 GCATATATTGATCTAACAGAAGCTCTCATTGTCTTACTGTTTTGAGCTCTAGTTGCATTT 2155
consensus_14073#2 GCATATATTGATCTNACAGAAGCTCTCATTGTCTAAAAAAAAAAA--------------- 118
consensus_14073#1 GT---TACCAATGCAGTGTAGCCATGCATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 143
* ** ** * * *** * *
consensus_14073#0 GGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATGAATGGGAATCTACATTGAACTAT 2215
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 AAAAAAAAAAAAAAAAAAAAA--------------------------------------- 164
consensus_14073#0 TCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCTGGATTCTTAGAACATTACTTTTG 2275
consensus_14073#2 ------------------------------------------------------------
consensus_14073#1 ------------------------------------------------------------
consensus_14073#0 CTGTTACGTGGTCTGCAATAAGAAAATCCTGCATTCCGACTCAAAAAAAAAAAAAAAA 2333
consensus_14073#2 ----------------------------------------------------------
consensus_14073#1 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||