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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1450 fasta sequence
[CCGAGTCGGGTCTCGCATCGCTCTCCTCCGCGAAGAGAGAGGGGGCGAAGATAGAAGGGGAGGGTCGGAGGGAGGACTGAGGAGGAGGAGGCGGTGCCGGTGACGGCGCACGGCGGCGGCGACTGCCTCCTCTCTCGCGGCTAGGGCGTCGGGCTGAGGTTTGGGCGGCGCTGGGCAGAAGTTTGGGCGGCGCACGGTGGTTGAGCTTAGCCGCTGAGAGCTCACGGCGGCAGTTGGCGGCGGGAGCGGCTCCCCACGGCGAGGAGGCGCACGGCAGGAGCTAGACAACGGCGGCGGCATAGCAGATCTGGTGCAAGGAGGAAGCTCAGGTGGCAGCAAACAGGAAGCTTTCTCCATTAGAAGGAATCAAACCGATCGAGAAGGATCAAACCAAGAAGAGAAAGGATCCTACATAGTATCTTGATACTGGTTACCTTGGCTAAGAGGACCGATCGGACTATTGGAGAGGAGGGGCTAAGTCGTCTCCACAACAGTGAACTGTCTCCGAGCCAAAACAGAACGAACGCCCAAACAGGCAAACCACGAACTCGAACCCTAGAAACCCTGACCATGGACTCGGGAGGCGGAGGAGGGGCATCGCACAAGGCAGCGTCGGGCTCCGCACCCTCGGGGGCGGCGGCCGCGAACCCCACGGCGATGCTCTCCGCCCTGATGAGCAAGCGCGCCAAGCTCCAGGAGGAGCTCCGCTCCATAGAGCGCCAGGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGCATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGTCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTTAACTCTACTGTAAACAACGTTGCTATAGATTCCAGACTCCAGTGAGACGAAAAAAAGACTCCAGCGAGACGAGAATCTGGATTGGCCGAANAAAA]
[+] EMBL AK121569 [CCGAGTCGGGTCTCGCATCGCTCTCCTCCGCGAAGAGAGAGGGGGCGAAGATAGAAGGGGAGGGTCGGAGGGAGGACTGAGGAGGAGGAGGCGGTGCCGGTGACGGCGCACGGCGGCGGCGACTGCCTCCTCTCTCGCGGCTAGGGCGTCGGGCTGAGGTTTGGGCGGCGCTGGGCAGAAGTTTGGGCGGCGCACGGTGGTTGAGCTTAGCCGCTGAGAGCTCACGGCGGCAGTTGGCGGCGGGAGCGGCTCCCCACGGCGAGGAGGCGCACGGCAGGAGCTAGACAACGGCGGCGGCATAGCAGATCTGGTGCAAGGAGGAAGCTCAGGTGGCAGCAAACAGGAAGCTTTCTCCATTAGAAGGAATCAAACCGATCGAGAAGGATCAAACCAAGAAGAGAAAGGATCCTACATAGTATCTTGATACTGGTTACCTTGGCTAAGAGGACCGATCGGACTATTGGAGAGGAGGGGCTAAGTCGTCTCCACAACAGTGAACTGTCTCCGAGCCAAAACAGAACGAACGCCCAAACAGGCAAACCACGAACTCGAACCCTAGAAACCCTGACCATGGACTCGGGAGGCGGAGGAGGGGCATCGCACAAGGCAGCGTCGGGCTCCGCACCCTCGGGGGCGGCGGCCGCGAACCCCACGGCGATGCTCTCCGCCCTGATGAGCAAGCGCGCCAAGCTCCAGGAGGAGCTCCGCTCCATAGAGCGCCAGGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGCATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGTCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTTAACTCTACTGTAAACAACGTTGCTATAGATTCCAGACTC ]
[+] EMBL AU056634 [ CCCCACGGCGATGCTCTCCGCCCTGATGAGCAAGCGCGCCAAGCTCCAGGAGGAGCTCCGCTCCATAGAGCGCCAGGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGNTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTG ]
[-] EMBL C99473 [ CCCACGGCGATGCTCTCCGCCCTGATGAGCAAGCGCGCCAAGCTCCAGGAGGAGCTCCGCTCCATAGAGCGCCAGGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATGTGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGNAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAG ]
[+] EMBL CA758221 [ CTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGCATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGTCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTTAACTCTACTGTAAACAACGTTGCTATAGATTCCAGACTCCAGTGAGACGAGGATGAGACTCCAGCGAGACGAGAATCTGGATTGGCCGAANAAAA]
[+] EMBL AU091702 [ tgggGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGCATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGTCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTTAACTCTACTGTAAACAACGTTGCTATAGATTCCAGACTCCAGTGAGACGAAAAAA ]
[+] EMBL AU070168 [ CTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGCATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGTCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTTAACTCTACTGTAAACAACGTTGCTATAGATTCCAGACTCCAGTGAGACGAAAAAA ]
consensusID : consensus_14210#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 689 fasta sequence
[CGTTTCTCCTCGAGGCCGCGAAGAGAGAAGGGGGAGGGAGGACTGAGGCAGCGGCGGC-GGTAGCAGTGAAGGCACACGGCGCATGGTGGCAGGTGGTGGC-GGCTGCCTCCTCTCGCACAGCAAGGGCGCCGGGCGGAGGTCTGGGCGGCGCTGGGCGGAGGTCAGGGCAGCGCACGGCGGTTGGATTTGGCGCTGAGACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGGCAGGAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCAGGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTTGAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATACCAACAGCCATGGATGCATTTCGTGATTACCTAGCCGGTCGTATTGCAGGTTGATGGACATATATCGTATTTTGTGTTGTTTTGCGGTCTTATGCTCTATCTTTCGATGATAATGGTACTAGTTATTATTACTAAATATATGTCATGCAACAACTTTAATTTTTACTTTATTTTGGAGTACCAATCATATAATGATTGATTGAATGTGTTCCCCCCTCCCTGGCAATGAATGGCAGTGGGTAGCTAAAAAAAAAAAAAAA]
[+] EMBL AK070570 [CGTTTCTCCTCGAGGCCGCGAAGAGAGAAGGGGGAGGGAGGACTGAGGCAGCGGCGGC GGTAGCAGTGAAGGCACACGGCGCATGGTGGC GGTGGTGGC GGCTGCCTCCTCTCGCACAGCAAGGGCGCCGGGCGGAGGTCTGGGCGGCGCTGGGCGGAGGTCAGGGCAGCGCACGGCGGTTGGATTTGGCGCTGAGACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGGCAGGAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCAGGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTTGAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATACCAACAGCCATGGATGCATTTCGTGATTACCTAGCCGGTCGTATTGCAGGTTGATGGACATATATCGTATTTTGTGTTGTTTTGCGGTCTTATGCTCTATCTTTCGATGATAATGGTACTAGTTATTATTACTAAATATATGTCATGCAACAACTTTAATTTTTACTTTATTTTGGAGTACCAATCA ]
[+] EMBL AU173041 [ CCTCGAGGCCGCGAAGAGAGAAGGGGGAGGGAGGACTGAGGCAGCGGCGGCAGGTAGCAGTGAAGGCACACGGCGCATGGTGGCAGGTGGTGGCAGGCTGCCTCCTCTCGCACAGCAAGGGCGCCGGGCGGAGGTCTGGGCGGCGCTGGGCGGAGGTCAGGGCAGCGCACGGCGGTTGGATTTGGCGCTGAGACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGGCAGGAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCAGGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTTGAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATA ]
[-] EMBL CA756300 [ gcGGTGGTGGC GGCTGCCTCCTCTCGCACAGCAAGGGCGCCGGGCGGAGGTCTGGGCGGCGCTGGGCGGAGGTCAGGGCAGCGCACGGCGGTTGGATTTGGCGCTGAGACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGGCAGGAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCAGGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTTGAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATACCAACAGCCATGGATGCATTTCGTGATTACCTAGCCGGTCGTATTGCAGGTTGATGGACATATATCGTATTTTGTGTTGTTTTGCGGTCTTATGCTCTATCTTTCGATGATAATGGTACTAGTTATTATTACTAAATATATGTCATGCAACAACTTTAATTTTTACTTTATTTTGGAGTACCAATCATATAATGATTGATTGAATGTGTTCCCCCCTCCCTGGCAATGAATGGCAGTGGGTAGCTAAAAAAAAAAAAAAA]
[+] EMBL AU164778 [ GGCGGAGGTCAGGGCAGCGCACGGCGGTTGGATTTGGCGCTGAGACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGGCAGGAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCAGGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTTGAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATACCAACAGCCATGGATGCATTTCGTGATTACCTAGCCGGTCGTATTGCAGGTTGATGGACATATATCGTATTTTGTGTTGTTTTGCGGTCTTATGCTCTATCTTTCGATGATAATGGTACTAGTTATTATTACTAAATATATGTCATGCAACAACTTTAATTTTTACTTTATTTTGGAGTACCAATCATATAATGATTGATTGAAaaa ]
consensusID : consensus_14210#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[GGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGGAATTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTCCTGTGCTTGTATTTTCTTCCTTTTCAACCCACCCCGGCGTGCTGATTGGCTCCGTTTGTAAGCAGACAAGTAATTAGACGGGATAATTCTGTACTCTACTGGAACAACGTGTATAGATTCAGACTCAGTGAGACGAGATGAGACTCAGCGAGACGAGATTGGT]
[+] EMBL BU572366 [GGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTAAAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGGAAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGATGAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGGAATTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTCCTGTGCTTGTATTTTCTTCCTTTTCAACCCACCCCGGCGTGCTGATTGGCTCCGTTTGTAAGCAGACAAGTAATTAGACGGGATAATTCTGTACTCTACTGGAACAACGTGTATAGATTCAGACTCAGTGAGACGAGATGAGACTCAGCGAGACGAGATTGGT]
consensusID : consensus_14210#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 489 fasta sequence
[AGCTGAAACCAGGAACAATTGANACTCTGGGCTCAATACTAGCTGCATCCTGGCAGATGGAAGANAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAANAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACNGCCATCAAATGATCCAGATCTGGACGACGAANAGGACTTCTAACTCGACATGTTGTANGCCTAGCTCANTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAANCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGTATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGGCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTT]
[+] EMBL BE530965 [AGCTGAAACCAGGAACAATTGANACTCTGGGCTCAATACTAGCTGCATCCTGGCAGATGGAAGANAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAANAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACNGCCATCAAATGATCCAGATCTGGACGACGAANAGGACTTCTAACTCGACATGTTGTANGCCTAGCTCANTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAANCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGTATTTTCTTCCTTTTCAACCCACCCCGGCGTTGTCTGATTGGCTCCCGTTTTGTAAAGCAGTAGCAAGTTAATTAGACGGTGATAATTTCTGTT]
[+] EMBL BE530933 [AGCTGAAACCAGGAACAATTGAGACTCTGGGCTCAATACTAGCTGCATCCTGGCAGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCAACCACTCCTGCAAACGGGCAAGGAAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGAGACGGCAAGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTAACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAGACTCATGCTTCGAATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTGTGTTGCAATCCATGGCAAGCAAAGCCTTTTCCCCAGGGAGTAGCCTTGCTCATCTAGTCATCTTATCGTCGGCATTTGCCTGTGCTTGTATTTTCTTCCTTTTCAACCCACCCC ]
consensusID : consensus_14210#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 314 fasta sequence
[ACCCNTTNGTTCCNCACCGCACCGAGCCAGACTAGCGCACATCGCGTTTCTCCTCGAGGCCGCGAAGAGAGAAGGGGGAGNGAGGACTGAGGNANCGGCGGCGGTAAGAAGTTGAAGGCANACGGCNGANTTGTTGCGNTGTTGGCGGGTTNCTGNTCTCGNACAGCAAGGGCGNCNCGCGNAGNTCTGTGCGGCGNTGNGCGCAGGTCAGTGCAGCGNACGTTCGGTTGNATTTGNCGCTGAGACCTCATNGCGGCGGCACTTTNCGGTGGGANCGNCTCCNCACANCGAGCAGTNNCACTGCACTAAGCTTG]
[+] EMBL OSC18521 [ACCCNTTNGTTCCNCACCGCACCGAGCCAGACTAGCGCACATCGCGTTTCTCCTCGAGGCCGCGAAGAGAGAAGGGGGAGNGAGGACTGAGGNANCGGCGGCGGTAAGAAGTTGAAGGCANACGGCNGANTTGTTGCGNTGTTGGCGGGTTNCTGNTCTCGNACAGCAAGGGCGNCNCGCGNAGNTCTGTGCGGCGNTGNGCGCAGGTCAGTGCAGCGNACGTTCGGTTGNATTTGNCGCTGAGACCTCATNGCGGCGGCACTTTNCGGTGGGANCGNCTCCNCACANCGAGCAGTNNCACTGCACTAAGCTTG]
consensusID : consensus_14210#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[CGAGNACGTTGGGNGCCTTGCTCATNNNGTCATCTTATCGTCGGCANTTCCCTGTCCTTGCATTTCCTNCCTTTNAAACCCACCCCGGCGTTGTCTGATTGTNTCCCGTTTTGTAAAGCAGTAGCAAGTTAATAAGACGGTGATAATTNCNGTAAACTCTACTGTAAACAACGTTGCTATAGATNCCAGACTC]
[+] EMBL OSR00511A [CGAGNACGTTGGGNGCCTTGCTCATNNNGTCATCTTATCGTCGGCANTTCCCTGTCCTTGCATTTCCTNCCTTTNAAACCCACCCCGGCGTTGTCTGATTGTNTCCCGTTTTGTAAAGCAGTAGCAAGTTAATAAGACGGTGATAATTNCNGTAAACTCTACTGTAAACAACGTTGCTATAGATNCCAGACTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CCGAGTCGGGTCTCGCATCGCTCTCCTCCGCGAAGAGAGAGGGGGCGAAGATAGAAGGGG 60
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AGGGTCGGAGGGAGGACTGAGGAGGAGGAGGCGGTGCCGGTGACGGCGCACGGCGGCGGC 120
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 GACTGCCTCCTCTCTCGCGGCTAGGGCGTCGGGCTGAGGTTTGGGCGGCGCTGGGCAGAA 180
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 GTTTGGGCGGCGCACGGTGGTTGAGCTTAGCCGCTGAGAGCTCACGGCGGCAGTTGGCGG 240
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CGGGAGCGGCTCCCCACGGCGAGGAGGCGCACGGCAGGAGCTAGACAACGGCGGCGGCAT 300
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AGCAGATCTGGTGCAAGGAGGAAGCTCAGGTGGCAGCAAACAGGAAGCTTTCTCCATTAG 360
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AAGGAATCAAACCGATCGAGAAGGATCAAACCAAGAAGAGAAAGGATCCTACATAGTATC 420
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 TTGATACTGGTTACCTTGGCTAAGAGGACCGATCGGACTATTGGAGAGGAGGGGCTAAGT 480
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CGTCTCCACAACAGTGAACTGTCTCCGAGCCAAAACAGAACGAACGCCCAAACAGGCAAA 540
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CCACGAACTCGAACCCTAGAAACCCTGACCATGGACTCGGGAGGCGGAGGAGGGGCATCG 600
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CACAAGGCAGCGTCGGGCTCCGCACCCTCGGGGGCGGCGGCCGCGAACCCCACGGCGATG 660
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 ------------------------------------------------------------
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CTCTCCGCCCTGATGAGCAAGCGCGCCAAGCTCCAGGAGGAGCTCCGCTCCATAGAGCGC 720
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 --GGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTA 58
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 CAGGTTTATGAAATGGAGACAACCTACCTACAAGAGTCTAATCAATTCGGAAGTGTGCTA 780
consensus_14210#1 ------------------------------------------------------------
consensus_14210#4 --------------------------------------------------------ACCC 4
consensus_14210#2 AAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGG 118
consensus_14210#3 ---------------------------------------------------------AGC 3
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AAGGGTTTTGAATCATTCTTATCATCGTCAAAGAACACTTCCAATCTCAAGCGCTCCAGG 840
consensus_14210#1 ----------------------------------------CGTTTCTCCTCGAGGCCGCG 20
consensus_14210#4 NTTNGTTCCNCACCGCACCGAGCCAGACTAGCGCACATCGCGTTTCTCCTCGAGGCCGCG 64
consensus_14210#2 AAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCG------ 172
consensus_14210#3 TGAAACCAGGAACAATTGANACTCTGGGCTCAAT-ACTAGCTGCATCCTGGCAG------ 56
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AAGTTCCAGGCTGATGAGAGGCTGTTCTCCCTGTCATCGGTTACATCTCCAGCGGTCGAT 900
consensus_14210#1 AAGAGAGAAGGGGGAGGGAGGACTGAGGCAGCGGCGGCGGTAGCAG--TGAAGGCACACG 78
consensus_14210#4 AAGAGAGAAGGGGGAGNGAGGACTGAGGNANCGGCGGCGGTAAGAAGTTGAAGGCANACG 124
consensus_14210#2 ----------------------GTCGATGAACATATGGCT-GGACGAGATGATGGAAGAG 209
consensus_14210#3 ----------------------ATGGAAGANAATATGGATCAGGTCGTTCGAAAGGTGCA 94
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 GAACATATGGCTGGACGAGATGATGGAAGAGAATATGGATCAGGTCGTTCGAAAGGTGCA 960
consensus_14210#1 GCGCATG-GTGGCAGGTGGTGGCGGCTGCCTCCTCTCGCACAGCAAGGGCGCCGGGCGGA 137
consensus_14210#4 GCNGANTTGTTGC-GNTGTTGGCGGGTTNCTGNTCTCGNACAGCAAGGGCGNCNCGCGNA 183
consensus_14210#2 AATATGGATCAGGTCGTTCGAAA---GGTGCAACCACTCCTGCGTCGCCCTGGAGGGAGA 266
consensus_14210#3 ACCACTCCTGCAAACGGGCAAGG---AAAACCAAANAAGGGAGGTCGCCCTGGAGGGAGA 151
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 ACCACTCCTGCAAACGGGCAAGG---AAAACCAAAGAAGGGAGGTCGCCCTGGAGGGAGA 1017
consensus_14210#1 GGTCTGGGCGGCGCTGGGCGGAGGTCAGGGCAGCGCACGG-CGGTTGGATTTGGCGCTGA 196
consensus_14210#4 GNTCTGTGCGGCGNTGNGCGCAGGTCAGTGCAGCGNACGTTCGGTTGNATTTGNCGCTGA 243
consensus_14210#2 GACGGCA-AGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTA 325
consensus_14210#3 GACGGCA-AGAGAATACNGCCATCAAATGATCCAGATCTGGACGACGAANAGGACTTCTA 210
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 GACGGCA-AGAGAATACGGCCATCAAATGATCCAGATCTGGACGACGAAGAGGACTTCTA 1076
consensus_14210#1 GACCTCATGGCGGCGGCACTTGGCGGCGGGAGCGGCTCCCCACAGCGAGGAGGCGCACGG 256
consensus_14210#4 GACCTCATNGCGGCGGCACTTTNCGGTGGGANCGNCTCCNCACANCGAGCAGTNNCACTG 303
consensus_14210#2 ACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAG-ACTCATGCTTCG 384
consensus_14210#3 ACTCGACATGTTGTANGCCTAGCTCANTGATGATTTAACCTTGCTAG-ACTCATGCTTCG 269
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 ACTCGACATGTTGTAGGCCTAGCTCAGTGATGATTTAACCTTGCTAG-ACTCATGCTTCG 1135
consensus_14210#1 CAG-GAGCTGGGCGACGCCGGTGGCATAGCAGATCTGGTGCAAGGAGCAAGGACATACCA 315
consensus_14210#4 CACTAAGCTTG------------------------------------------------- 314
consensus_14210#2 AATCATTCTTTCTGTATTGGAATTTTTTTT-AATCTTG-----TGTTGCAATCCATGGCA 438
consensus_14210#3 AATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTG-----TGTTGCAATCCATGGCA 324
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 AATCATTCTTTCTGTATTGTAATTTTTTTTTAATCTTG-----TGTTGCAATCCATGGCA 1190
consensus_14210#1 GGCTGCACCAAATTTATTAAGACTGGCTTGCAAAATGAAGAGCTACTTGAGAAGATGTTT 375
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 AGCAAAGCCTTTTCCC-AGGGAGTAGCC-TTGCTCAT-----CTAGTCATCTTATCGTCG 491
consensus_14210#3 AGCAAANCCTTTTCCCCAGGGAGTAGCC-TTGCTCAT-----CTAGTCATCTTATCGTCG 378
consensus_14210#5 -----------CGAGNACGTTGGGNGCC-TTGCTCAT-----NNNGTCATCTTATCGTCG 43
consensus_14210#0 AGCAAAGCCTTTTCCCCAGGGAGTAGCC-TTGCTCAT-----CTAGTCATCTTATCGTCG 1244
consensus_14210#1 GAAGATATCCGCAATACCGGTGCTAACCATTGGTCTTTGGGGCAAGGCACCATACCAACA 435
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 GCATTT-CCTGTGCTTGTATTTTCTT---CCTTTTCAACCCACCCCGGCGTG--CTGATT 545
consensus_14210#3 GCATTTGCCTGTGCTTGTATTTTCTT---CCTTTTCAACCCACCCCGGCGTTGTCTGATT 435
consensus_14210#5 GCANTTCCCTGTCCTTGCATTTCCTN---CCTTTNAAACCCACCCCGGCGTTGTCTGATT 100
consensus_14210#0 GCATTTGCCTGTGCTTGCATTTTCTT---CCTTTTCAACCCACCCCGGCGTTGTCTGATT 1301
consensus_14210#1 GCCATGGATGCATTTCGTGATTACCTAGCCGGTCGTATTGCAGGTTGATGGACATATATC 495
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 GGCTCCG--TTTGTAA-GCAG--ACAAGT--AATTAGACGG-GATAATTCTGTACTCTAC 597
consensus_14210#3 GGCTCCCGTTTTGTAAAGCAGTAGCAAGTT-AATTAGACGGTGATAATTTC-TGTT---- 489
consensus_14210#5 GTNTCCCGTTTTGTAAAGCAGTAGCAAGTT-AATAAGACGGTGATAATTNCNGTAAACTC 159
consensus_14210#0 GTCTCCCGTTTTGTAAAGCAGTAGCAAGTT-AATTAGACGGTGATAATTTCTGTTAACTC 1360
consensus_14210#1 GTATTTTGTGTTGTTTTGCGGTCTTATGCTCTATCTTTCGATGATAATGGTACTAGTTAT 555
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 TGGAACAACGTGTATAGATTCAGACTCAGTGAGACGAGATGAGACTCAGCGAGACGAGAT 657
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 TACTGTAAACAACGTTGCTATAGATNCCAGACTC-------------------------- 193
consensus_14210#0 TACTGTAAACAACGTTGCTATAGATTCCAGACTCCAGTGAGACGAAAAAAAGACTCCAGC 1420
consensus_14210#1 TATTACTAAATATATGTCATGCAACAACTTTAATTTTTACTTTATTTTGGAGTACCAATC 615
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 TGGT-------------------------------------------------------- 661
consensus_14210#3 ------------------------------------------------------------
consensus_14210#5 ------------------------------------------------------------
consensus_14210#0 GAGACGAGAATCTGGATTGGCCGAANAAAA------------------------------ 1450
consensus_14210#1 ATATAATGATTGATTGAATGTGTTCCCCCCTCCCTGGCAATGAATGGCAGTGGGTAGCTA 675
consensus_14210#4 ------------------------------------------------------------
consensus_14210#2 --------------
consensus_14210#3 --------------
consensus_14210#5 --------------
consensus_14210#0 --------------
consensus_14210#1 AAAAAAAAAAAAAA 689
consensus_14210#4 --------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||