cluster # 14505

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14505 cluster # 14505 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14505#0 length = 2283 sequences # 16

consensus_14505#1 length = 265 sequences # 1

consensusID : consensus_14505#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 2283
fasta sequence

                              [GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTCGCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAATCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGT-CTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG-TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT-GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG-CCTCTTCTGTTCGAGTTGTCAGA-CT-CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA-TTGTAAATTTGGTGAA-CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC-AAG-CAAGAAACCTTGTTGTAACCATGCCACGTC-AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF304461             [GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTCGCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAATCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGTGCTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C72764               [                                                                                                                                                                       GGAATTTCTTCTTACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGT NTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB628609             [                                                                                                                                                                                                                                         ATCTCACTCTTGTGATAGCACTACAGAACAATTAGCACTATGTGCTGCTGGAGTTCCGCAGAGACTTGTTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAATCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTTTGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTTTGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTTTCAAGACAGACAAATTAAAACCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB633718             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTTGCCCTCATCGAGGAACCTGGTCATGTAGGAGATGATGCTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCTCAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGCGTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGATCTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTGTTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTACTTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATGACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAAGG TATGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF323409             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGGNTATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGTGGGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGACCT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF328124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTTCAAGCCTCATAT   ATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK062181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACTTTATCTACTCTTTCAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACAATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTTTAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGG TATGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATATTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATAC                                      ]
[-] EMBL CB628610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGAGCAAGGACAAACAATTGAGAGTTGCACCCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCCCCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAACCCTTGTTGTAACCATGCCACGTC AGAAACCCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGCCCAAAACCCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACG                                                                                                  ]
[-] EMBL CB639020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAACAATTGAGAGTTGCAACCTTGT GGTGTGTTCTGAACTTGATTTATCCAAAATGTGAGG CCTCTTCTGTTCGAGTTGTCAGA CT CCAAAATGCTGGGGTAATTTCACAAGTAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTTTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAA CTGAaaatga                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU085876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATGTGAGGCCCTCTTCTGTNCGAGTTGTCAGA CTCCCAAAATGCTGGGGTAATTTCACAAGT AAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAA                      ]
[-] EMBL CF328123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACC AAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAA                     ]
[+] EMBL BI118670             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTTGAACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGGCCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTCTTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCTTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTCGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGC                                                                                                                                                       ]
[+] EMBL BI804642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCA TTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTC ATAAAGATACTACTCTTGACAAAA                        ]
[+] EMBL BI802749             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCAGTTGTAAATTTGGTGAA CTCCATGAGGACCATGACTGGTTTCTCTTGCAGAAAC AAG CAAGAAACCTTGTTGTAACCATGCCACGTCAAGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAA CAGTGTGTAATGGTTTT CCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAA                        ]
[-] EMBL OSC107781            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAAA TTGGTGAACCCCCATGGGGCCCATGACTGGNTTCNCTTGCAGAAACAAAGCCAAGAAACCTTGTTGTAACCATGCCACGTC AGAAAACCTGAGCTGATTTCCTCCGAAACGGNAAAAGGNTTTAGGTGCTANCTCTGGAGAAANTTCANTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGANTGGTGANTGTATAANTGAGGGAGATATGCTACTGCTGCTGTAAANTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGNCGGTGCCCAGCAANCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTNACAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA754630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAGAAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGAGTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTATGTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCTTGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAA                 ]




>consensus_14505#0
GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTC
GCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAA
TCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTT
ACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCAC
TCTTGTGATAGCACTACAGAACAATTAGCACTATGTCTGCTGGAGTTCCGCAGAGACTTG
TTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAA
TCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTT
TGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTT
TGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAA
CCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATG
CTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCT
CAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGC
GTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGAT
CTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTG
TTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTAC
TTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATG
ACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATT
TAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGT
CCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGT
TCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTT
CAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACA
ATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTT
TAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGGTA
TGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATA
TTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGA
GCAAGGACAAACAATTGAGAGTTGCAACCTTGTGGTGTGTTCTGAACTTGATTTATCCAA
AATGTGAGGCCTCTTCTGTTCGAGTTGTCAGACTCCAAAATGCTGGGGTAATTTCACAAG
TAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTG
AACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGG
CCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTC
TTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCT
TCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCATTGTAAATTTGGTGAACTCCATGAG
GACCATGACTGGTTTCTCTTGCAGAAACAAGCAAGAAACCTTGTTGTAACCATGCCACGT
CAGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAG
AAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGA
GTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTAT
GTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCT
TGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAAAAAAAAAAAAAAAA
AAA

consensusID : consensus_14505#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 265
fasta sequence

                              [TTTTGTATGACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNNNNNGCCTCNNATNTGN]

[+] EMBL CF196683             [TTTTGTATGACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGTCCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGTTCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNNNNNGCCTCNNATNTGN]




>consensus_14505#1
TTTTGTATGACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTG
CTGTGAATTTAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTG
TTCATTTGTCCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNA
ATATTATGTTCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTAT
CTACTCTNNNNNGCCTCNNATNTGN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14505#0      GACGACGGCGTGCGGGCCGTGCTCGCCGCCGGGGCCGTGGCCCACCTGACGCGGCTCCTC 60
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GCCCACCCCGACGAGAAGGTTGTTGATGCTAGTGCACGTGCTCTGAGAATGATTTATCAA 120
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TCGAAACTAGCTCCAAAGTTTGATGTCAACAATAATGAGAAAAACATGGAATTTCTTCTT 180
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      ACCCTTTTGAACAGCGAGAATGAAAATGTCACAGAGCTTGCTGCCAATATTATATCTCAC 240
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TCTTGTGATAGCACTACAGAACAATTAGCACTATGTCTGCTGGAGTTCCGCAGAGACTTG 300
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TTAACCATTTTGGAGGCTCCATGAATCTACGGGATGCTTGCTTAGATTCTTTGACTGCAA 360
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TCATAAGAAATAACTGGGAAGTTGCTTCAAGATTTGCACTGCTGGACCATGGAAAAGCTT 420
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TGCGCTCAATAGTTGCATTAATACATGATCGGAGCCCACGCACAAGACTACTTGCTTGTT 480
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TGTGCTTGATTGCGCTTAGCCATGCTTCTCCCTGTCACTNTCAAGACAGACAAATTAAAA 540
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CCAAGTTGATCCTGGTCTTACTTGAGCTCATCGAGGAACCTGGTCATGTAGGAGATGATG 600
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CTCCATTGGCATTGACAACCTTGATCAAAGACAGTGTGGAACTGCAGAAGCAAGCACTCT 660
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CAACAAACGCAGTTCAGAAGTTAAGCAACCATCTTATAGCAAATTCGTTGGAGTCAAGGC 720
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GTGCAGTGACCATATTGCTTGCTTTAGCTGAACTTTGCTCAAAATTGGAAGAATCAAGAT 780
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CTCAACTTATGTCAGTTCAGGCATCTACCTTAATCCTTGATGCACTGAAGCATGCTTCTG 840
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TTGATATCCGTGTTGCAGCATGTTCATGTCTTAAGAATATCTCTAGGTCATCCAAAGTAC 900
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TTAGTGCTGGGAAATTATCCTGTGATACATTTATTGCCCCACTAGTCCAGCTTTTGTATG 960
consensus_14505#1      ---------------------------------------------------TTTTGTATG 9
                                                                          *********

consensus_14505#0      ACTCGTCTATGTCAGTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATT 1020
consensus_14505#1      ACTCGTCTATGTNNNTTCAGGTTGCTGCCCTTGGTGCTATTTGCAATATTGCTGTGAATT 69
                       ************   *********************************************

consensus_14505#0      TAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGT 1080
consensus_14505#1      TAACACCCAGGAAATCGATTCTTCTTCAATCTGGGGCTGTCTCCCAGCTTGTTCATTTGT 129
                       ************************************************************

consensus_14505#0      CCAAGTCTATGGATCCAACATTGAGATTAAAAGCTGTGTGGGCTCTTAGGAATATTATGT 1140
consensus_14505#1      CCAAGTCTATGGATCNNNNATTGANNTTAAAAGCTGTGTGGGCTCTTNNNAATATTATGT 189
                       ***************    *****  *********************   **********

consensus_14505#0      TCCTTTTGAATCCAAAGGATAAAGACTTTATTCTCAAGGAACTAACTTTATCTACTCTTT 1200
consensus_14505#1      TCCTTTTGAATCCAAAGGATAAAGACNNNATTCTNANGGAACTAACTTTATCTACTCTNN 249
                       **************************   ***** * *********************  

consensus_14505#0      CAAGCCTCATATGTGATTCTGAACATTTTGTCCAGGAACAAACTTTGGCACTGGTGCACA 1260
consensus_14505#1      NNNGCCTCNNATNTGN-------------------------------------------- 265
                          *****  ** **                                             

consensus_14505#0      ATCTTGTTGATGGATATGTGAACTCTTTTAATTATGTCATTGGTGAAGATGGCATGATTT 1320
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TAAATGCTATTTCAAGACAACTGAATAATGCACCTGCCCCAGGAGTATGCATACAGGGTA 1380
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TGTTTGTGCTTGCAAATGTTGCAGCTGGGGGCGAATTAAACAAGGAGGCTGTGATGAATA 1440
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TTCTTGTACCTCGTCGAGCAGATCGTGTCAAACAATCTTTTATAGTTAACTTTCTGCTGA 1500
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GCAAGGACAAACAATTGAGAGTTGCAACCTTGTGGTGTGTTCTGAACTTGATTTATCCAA 1560
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      AATGTGAGGCCTCTTCTGTTCGAGTTGTCAGACTCCAAAATGCTGGGGTAATTTCACAAG 1620
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TAAAAGGCATGATAAATGATCCCTGCTTGGATTGCAAGCTTAGAGTACGCATGGTGCTTG 1680
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      AACACTGCTTGGACAATGCCGACGATGGTTTCATGTGAGCAGCCGCCATTGCACCTCGGG 1740
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CCATTGAAGCTTGCAGAATCAAACACTGCTTGAGCAAAGAGAAGATGGAAGATTGATCTC 1800
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TTCGCATCAGCAATCCGCGCCATGAACTGTGAACAATGATCATCCAGTAAAAAAAAGCCT 1860
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TCACCGACATCTTCTCGTCGCCTCCAAGCCTGTCATTGTAAATTTGGTGAACTCCATGAG 1920
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GACCATGACTGGTTTCTCTTGCAGAAACAAGCAAGAAACCTTGTTGTAACCATGCCACGT 1980
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      CAGAAAACCTGAGCTGATTTCCTCCGAAACGGAAAAAGGTTTTAGGTGCTAGCTCTGGAG 2040
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      AAATTTCATTCCTTAGCATGACCAAAAACCTAGTGCTTGTGCTGTGACGATGAGTGGTGA 2100
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GTGTATAATTGAGGGAGATATGCTACTGCTGCTGTAAATTGTACTACTCTCTTGGGCTAT 2160
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      GTTTTTCACGTTCGGCCATGGGACGGTGCCCAGCAAGCAGTGTGTAATGGTTTTGCCGCT 2220
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      TGCTTTTGCTTCTCAATAAAGATACTACTCTTGACAAAAAAAAAAAAAAAAAAAAAAAAA 2280
consensus_14505#1      ------------------------------------------------------------
                                                                                   

consensus_14505#0      AAA 2283
consensus_14505#1      ---