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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2071 fasta sequence
[GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC-TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT---AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT-CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT-CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT-GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA]
[+] EMBL AK067189 [GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTTCAGAGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAGGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGG ]
[+] EMBL CB623232 [ ATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAGGGGCGGTGCGGAATTGGAGAGAGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAA ]
[+] EMBL AK062085 [ aaCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCCCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACGTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCA ]
[+] EMBL CB676199 [ TCCGGTTCTGAGAGCGTCTCATCGACATCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTTCCTGAg ]
[+] EMBL CB619507 [ C TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTTCAGAGAGCGAGGGGCGGTGCGGAATTGGAGAGAGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCTCCCTTATTACCCTTTTCCTAGGCACAT ]
[+] EMBL CB626585 [ TACCACCATGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTTTGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCCAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCT ]
[+] EMBL CB685956 [ CGTTCGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTNCAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCAT ]
[+] EMBL CB675465 [ ACATGCCCTTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTC ]
[-] EMBL CB675466 [ CTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAG ]
[-] EMBL CB619508 [ GTGTTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGA ]
[-] EMBL CB623233 [ GGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTGNGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCAGAGATACCGTAATGATCATCAGAGCTTCAGATA ]
[-] EMBL CB626586 [ GTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATAAAAAAAAga ]
[-] EMBL CB676200 [ ATCCCACCNCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGA ]
[-] EMBL CB653507 [ GTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTTTTTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTTTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTTTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCCCATTGTATGAATCTTCCTGACTCAGGTAGAGTTTTGCCAGAGATTGCATCATCCTAGTTTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTTTTCAGATGGAGCATAGATCCCGTAATGATGATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA]
[-] EMBL CB685957 [ GTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTTTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGA ]
[+] EMBL AA751934 [ tcggcacGAGGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGAGTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATNNNAAAAAAAAAAAA ]
consensusID : consensus_14854#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 599 fasta sequence
[ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCCATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCACAATGT]
[+] EMBL CB640578 [ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGG ]
[+] EMBL CB665382 [ ACGCCCCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCGCGCCCCCCCACGCCCGGCGCCCCACCAGGACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCCATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCACAATGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14854#0 GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTC 60
consensus_14854#1 ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGC-CTCGCCAACCGCGCGCTGC 59
* * ** * **** * * * ** ** * ** * *
consensus_14854#0 TGAGAGCGTCTCATCGACTCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTG 120
consensus_14854#1 TGCGC-CGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGG-----CCCCGTCCCGCG 113
** * ** *** *** * ** *** ** * **** ** ***** * *
consensus_14854#0 -CACGCCAAGATTTCCCAAGAAACC-CGCTCGCTCGCTGCCCTTAGAGCGA--------- 169
consensus_14854#1 GCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACC 173
** * * * ***** * *** *** *** *** * **
consensus_14854#0 AGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCC 229
consensus_14854#1 AGTACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCC 233
** * *** * * * * ** ** ************* *** ***** **
consensus_14854#0 ATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCC 289
consensus_14854#1 ATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCC 293
******** ******* ** ******* ***** ***** *******************
consensus_14854#0 TTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCG 349
consensus_14854#1 TTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCG 353
************** ******** ************************************
consensus_14854#0 ACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGC 409
consensus_14854#1 ACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGC 413
************* **********************************************
consensus_14854#0 AACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCA 469
consensus_14854#1 AACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCA 473
****** ************** ************** ***********************
consensus_14854#0 CTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATC 529
consensus_14854#1 CTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATC 533
************************************************************
consensus_14854#0 TTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCA 589
consensus_14854#1 TTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCA 593
****************** ***** ************** **** ***************
consensus_14854#0 AAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACAT 649
consensus_14854#1 CAATGT------------------------------------------------------ 599
*****
consensus_14854#0 CCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTA 709
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACA 769
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GTTCTCCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTTCTGAAGGGTGTTGAG 829
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGT 889
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGG 949
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 CCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTT 1009
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGC 1069
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 TCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATG 1129
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 TATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAG 1189
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTC 1249
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTT 1309
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCA 1369
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTT 1429
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAAT 1489
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 TGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCA 1549
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTAC 1609
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCA 1669
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 GGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGG 1729
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 AAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGTCGTGCAA 1789
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 CAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATA 1849
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 CTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGA 1909
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 ATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGG 1969
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 CATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGAT 2029
consensus_14854#1 ------------------------------------------------------------
consensus_14854#0 CATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA 2071
consensus_14854#1 ------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||