cluster # 14903

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Oryza sativa
cluster # 14903 cluster # 14903 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14903#0 length = 996 sequences # 11
consensus_14903#1 length = 707 sequences # 5

consensus_14903#2 length = 372 sequences # 1
consensus_14903#3 length = 297 sequences # 1

consensusID : consensus_14903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 996
fasta sequence

                              [ATTGGAACTTGGTGTTGGGAGTCCCCGTCGACTCGCACTCGACAGTCGATCGCCAACAAGCCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA-AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA-GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATT-G-CTCTCAACTTGGCAGCTATGGGTT-T-AGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCT-CCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA-CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATGTTGTTAAAAAAAAAGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101285             [ATTGGAACTTGGTGTTGGGAGTCCCCGTCGACTCGCACTCGACAGTCGATCGCCAACAAGCCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATT G CTCTCAACTTGGCAGCTATGGGTT T AGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCT CCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACACTGGTTATTTATACAGAGTCAGTT                                                                                                                        ]
[+] EMBL CF317713             [                                            GTCGATCGCCAACAAGCCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGAGGGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATT G CTCTCAACTTGGCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK059166             [                                             TCGATCGCCAACAAGCCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATT G CTCTCAACTTGGCAGCTATGGGTT T AGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCT CCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTT                                                                                                                        ]
[+] EMBL C27065               [                                              CGATCGCCAACAAGCCCAAACCCGGAGAGAGCCGGAGGAGATCCNTCGTNTCCCGCATCCTCACCGGCCGCCGGCAATGGAGAAGGGCAAGGGCCTCGCCCGCNGCTGGGCGTTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGTTTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU223256             [                                                                AACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA753052             [                                                                      GAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAGCGGA AGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTNTAGCATAGGTATCACGTCCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTCTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTNGGTCTTTATC G CTCTCAACTTGGCAGCTATGGGTT T AGGTGTATGGAAGCTCAATACGTGGGGTCNTCTCCCACCAAATGCATCAAATGGGGTGTTTTCACTGGCT CCTGCTCGGGACGGTGAATATGCTGCTGGAGGGATCCCCTGCCCCTG AACCTNAATGTGCTTCAG TAGTAC TATT AAG TTTAACAC TGG AGATGGTGTC GTACT AGCCAAAA  TC CCCTGC CAT GGAC ACTCT GTTGTGGTagac                                                                                                                                                                                                                                  ]
[+] EMBL C28046               [                                                                                          GTCGTCTCCCGCATCCTCACCGGCCGCCGGCNATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGNTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGTTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGG GCGCGGCAGGGTA AGGNTTCCNAGACCGCTTGGAAGGCGCAGAAAGCTTGGNA GGTGGCGCAGGCGCCGTTNAAGAACCTGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU164746             [                                                                                          GTCGTCTCCCGCATCCTCACCGGCCGCCGGCGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGTTGGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCGACGCGGACGACGCCGCCGGCGCGCGGCAG GGANAGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCGTGGGA GGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGATGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGTGGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATT G CTCTCAACTTGGCAGCTATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI809046             [                                                                                                                                                                                                                                                                                                                                                                                                                                       cCACCCCATCAGC CCCTCCGCTCT TTGCCAAA TTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAA TTGGTCTTTATT G CTCTCAACTT GCAGCTAT GGTT T AGGTGTATGGAAGCTCAATAC TTGGGTCTTCTTCCCACAAATGCATCAGATTGGGTGTTTTCACTGGCT CCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTACCCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTAC ATTTCCTTGACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTCAAGCTGAATTATGTTGTTAAAAAAA                                                                                    ]
[+] EMBL AU161775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAAAGTTTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTAGCCTCTCAACTTGGCAGCTATGGGTTNTNAGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCT CCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATGTTGTTAAAAAAAAA                                                                                  ]
[+] EMBL AU031165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCTTCCAACAAATGCNTCAGATTGGGTGTTTTCACTGGCTCCCTGCTCGGGAGGTTGNATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGNTGAATTATGTTGTTATGATGATTGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14903#0
ATTGGAACTTGGTGTTGGGAGTCCCCGTCGACTCGCACTCGACAGTCGATCGCCAACAAG
CCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGG
CGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCT
CCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCG
ACGCGGACGACGCCGCCGGCGCGCGGCAGCGGAAGGATTCCGAGACCGCGTGGAAGGCGC
AGAAAGCGTGGGAGGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGA
TGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGT
GGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAA
GGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTGCTCTCAACTTGGCAGCTATGGGTT
TAGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGT
TTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAA
ACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGT
ACTAAGCGAAAAATTACCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTC
AGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCC
CTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATG
TTGTTAAAAAAAAAGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14903#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 707
fasta sequence

                              [TTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTGCTCTCAACTTGGCAGCTATGGGTTTAGGTGTATGGAAGGTAAGTTATAGTACCATGGTTTAGTCAGAATTTTCATGTTTCTCTGTAAGCACTTTGGGCACTTAGCTGCTTCTTTTACAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGA-TTGGGTGT-T-TTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCA-GTTAGTACTTATTAAAGTTTTACCA-CTTGGAAGATGGTGTCTGTACTAAGCGAA-AAATTACCCTGCAGATGGGACAAGTCTGGTTTTT-GTGAGGATCATAT-TTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTT-CCTTGACCCCTT-TTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATGTTGTTATAAAAAAAGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTAAGGCAATCTTGGTTTGATTATGAGCTGTGAGGCTCAAGATGGAATATGTTGGCCTGTTAGTGCTAGGGACCAATTTGTTGCCCTTATATACAACACCTTTACGTTTTGTTCTGAATAAAAAAA]

[-] EMBL CF337169             [TTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTGCTCTCAACTTGGCAGCTATGGGTTTAGGTGTATGGAAGGTAAGTTATAGTACCATGGTTTAGTCAGAATTTTCATGTTTCTCTGTAAGCACTTTGGGCACTTAGCTGCTTCTTTTACAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGA TTGGGTGT T TTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCA GTTAGTACTTATTAAAGTTTTACCA CTTGGAAGATGGTGTCTGTACTAAGCGAA AAATTACCCTGCAGATGGGACAAGTCTGGTTTTT GTGAGGATCATAT TTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTT CCTTGACCCCTT TTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATGTTGTTATAAAAAAA                                                                                                                                                                         ]
[+] EMBL BI805169             [                                                                                                                                                                                                                GCATCAGAGTTGGGTGTGTGTTCACTGGCTCCTGCTCGGGAGGTTGAATATTCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGGTTAGTACTTATTAAAGTTTTACCAGCTTGGAAGATGGTGTCTGTACTAAGCGAAGAAATTACCCT CCGATGGGACAAGTCTGGTTTTTGGTGAGGATCATATGTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTAC ATTT CCTTGACCCCTT TTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAaa                                                                                                                                                                                                ]
[+] EMBL BI796982             [                                                                                                                                                                                                                                                                                             AAACCTTTATGTGCTTCA GTTAGTACTTATTAAAGTTTTACCA CTTGGAAGATGGTGTCTGTACTAAGCGAA AAATTACCCTGCAGATGGGACAAGTCTGGTTTTT GTGAGGATCATAT TTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTT CCTTGAaaaa                                                                                                                                                                                                                                                   ]
[+] EMBL BI797566             [                                                                                                                                                                                                                                                                                                                                                                          ATTACCCTGCAGATGGGACAAGTCTGGTTTTT GTGAGGATCATAT TTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCCTTGACCCCTTCTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAaaaa                                                                                                                                                                                              ]
[+] EMBL AU108756             [                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTACTAAACTTGCACTATATCTTGAGACNAGTAACTTACAATTT CCTTGACCCCTT TTGTTTACCCTGGTTATTTATNCAGAGTCAGTTGATTCCTAGTAAAGCTGAATTATGTTGTTATGATGATTGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTAAGGCAATCTTGGTTTGATTATGAGCTGTGAGGCTCAAGATGGAATATGTTGGCCTGTTAGTGCTAGGGACCAATTTGTTGCCCTTATATACAACACCTTTACGTTTTGTTCTGAATAAAAAAA]




>consensus_14903#1
TTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTGC
TCTCAACTTGGCAGCTATGGGTTTAGGTGTATGGAAGGTAAGTTATAGTACCATGGTTTA
GTCAGAATTTTCATGTTTCTCTGTAAGCACTTTGGGCACTTAGCTGCTTCTTTTACAGCT
CAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCTCCTGC
TCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCA
GTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTA
CCCTGCAGATGGGACAAGTCTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAAC
TTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGACCCCTTTTGTTTACCCTGG
TTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAATTATGTTGTTATAAAAAAAGA
TTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTTCCTTAAGGCAATCTTGGTTTG
ATTATGAGCTGTGAGGCTCAAGATGGAATATGTTGGCCTGTTAGTGCTAGGGACCAATTT
GTTGCCCTTATATACAACACCTTTACGTTTTGTTCTGAATAAAAAAA

consensusID : consensus_14903#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 372
fasta sequence

                              [AAGGNCCTCGCCGCNCGCTGGGGNTGTGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCNCGACCCGCCCGGNTTNACCAGATCCGCCCCCGACGCGGACGANGNNGCCGGGCGCGGCAGNGNAAGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCNTGGGAGGTNGCGCAGGCGCCGTTCAAGAACCTGATGATNATGGGTTTCATGATGTNGATGGNCGGGAGCACCGTCCACCTNTTTAGCATAGGTATCACGTTCTCCGNTCTTGTTGCAGCCCATCAGCGGNCTNCGTTTTGTTGGCAAAGTTTTTNAACCATTNAAGGACCCAAGGNTGGATAATTTAGCACCTAAATTG]

[+] EMBL AU068345             [AAGGNCCTCGCCGCNCGCTGGGGNTGTGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCNCGACCCGCCCGGNTTNACCAGATCCGCCCCCGACGCGGACGANGNNGCCGGGCGCGGCAGNGNAAGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCNTGGGAGGTNGCGCAGGCGCCGTTCAAGAACCTGATGATNATGGGTTTCATGATGTNGATGGNCGGGAGCACCGTCCACCTNTTTAGCATAGGTATCACGTTCTCCGNTCTTGTTGCAGCCCATCAGCGGNCTNCGTTTTGTTGGCAAAGTTTTTNAACCATTNAAGGACCCAAGGNTGGATAATTTAGCACCTAAATTG]




>consensus_14903#2
AAGGNCCTCGCCGCNCGCTGGGGNTGTGAGCTCCACGACGCCTCCTCCTCCTCCTCCTCC
CACTCCTCCATCCNCGACCCGCCCGGNTTNACCAGATCCGCCCCCGACGCGGACGANGNN
GCCGGGCGCGGCAGNGNAAGGATTCCGAGACCGCGTGGAAGGCGCAGAAAGCNTGGGAGG
TNGCGCAGGCGCCGTTCAAGAACCTGATGATNATGGGTTTCATGATGTNGATGGNCGGGA
GCACCGTCCACCTNTTTAGCATAGGTATCACGTTCTCCGNTCTTGTTGCAGCCCATCAGC
GGNCTNCGTTTTGTTGGCAAAGTTTTTNAACCATTNAAGGACCCAAGGNTGGATAATTTA
GCACCTAAATTG

consensusID : consensus_14903#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 297
fasta sequence

                              [TCAATACGTTGGGTCTTCNTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTNCCCTGCAGATGGGACAAGTACTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGAAAAAAAAAAAAAAA]

[+] EMBL AU092816             [TCAATACGTTGGGTCTTCNTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATTNCCCTGCAGATGGGACAAGTACTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGAAAAAAAAAAAAAAA]




>consensus_14903#3
TCAATACGTTGGGTCTTCNTCCAACAAATGCATCAGATTGGGTGTTTTCACTGGCTCCTG
CTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCCTTGCACTGAAACCTTTATGTGCTTC
AGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTCTGTACTAAGCGAAAAATT
NCCCTGCAGATGGGACAAGTACTGGTTTTTGTGAGGATCATATTTCAGCACCTGTACTAA
ACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTTGAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      ATTGGAACTTGGTGTTGGGAGTCCCCGTCGACTCGCACTCGACAGTCGATCGCCAACAAG 60
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      CCCAAACCCGGAGAGAGCCGGAGGAGATCCGTCGTCTCCCGCATCCTCACCGGCCGCCGG 120
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      CGATGGAGAAGGGCAAGGGCCTCGCCCGCCGCTGGGCGGTGGAGCTCCACGACGCCTCCT 180
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      CCTCCTCCTCCTCCCACTCCTCCATCCCCGACCCGCCCGGCTTCACCAGATCCGCCCCCG 240
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      ACGCGGACGACGCCGCCGGCGCGCGGCAGCGGAAGGATTCCGAGACCGCGTGGAAGGCGC 300
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ------------------------------------------------------------
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      AGAAAGCGTGGGAGGTGGCGCAGGCGCCGTTCAAGAACCTGATGATGATGGGTTTCATGA 360
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ----------------TTTTGAACCATTCAAGGACCCAAGGGTGGATACTCTAGCACCTA 44
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      TGTGGATGGCCGGGAGCACCGTCCACCTGTTTAGCATAGGTATCACGTTCTCCGCTCTGT 420
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      AGTTGGTCTTTATTGCTCTCAACTTGGCAGCTATGGGTTTAGGTGTATGGAAGGTAAGTT 104
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      GGCAGCCCATCAGCGCCCTCCGCTCTGTTGGCAAAGTTTTTGAACCATTCAAGGACCCAA 480
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      ATAGTACCATGGTTTAGTCAGAATTTTCATGTTTCTCTGTAAGCACTTTGGGCACTTAGC 164
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      GGGTGGATACTCTAGCACCTAAGTTGGTCTTTATTGCTCTCAACTTGGCAGCTATGGGTT 540
consensus_14903#2      ---------------------AAGGNCCTCGCCGCNCGCTGGGGNTGTGAGCTCCACGAC 39
                                                                                   

consensus_14903#1      TGCTTCTTTTACAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGT 224
consensus_14903#3      ---------------TCAATACGTTGGGTCTTCNTCCAACAAATGCATCAGATTGGGTGT 45
consensus_14903#0      TAGGTGTATGGAAGCTCAATACGTTGGGTCTTCTTCCAACAAATGCATCAGATTGGGTGT 600
consensus_14903#2      GCCTCCTCCTCCTCCTCCTCCCACTCCTCCATCCNCGACCCGCCCGGNTTNACCAGAT-- 97
                                      **    *  *    * **  * * *           *   * *  

consensus_14903#1      TTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCC---TTGCACT 281
consensus_14903#3      TTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCC---TTGCACT 102
consensus_14903#0      TTTCACTGGCTCCTGCTCGGGAGGTTGAATATGCTGGTGGAGGGATCCCC---TTGCACT 657
consensus_14903#2      CCGCCCCCGACGCGGACGANGNNGCCGGGCGCGGCAGNGNAAGGATTCCGAGACCGCGTG 157
                          * *  *   * *     *  *  *     *   * * * **** **      **   

consensus_14903#1      GAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTC 341
consensus_14903#3      GAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTC 162
consensus_14903#0      GAAACCTTTATGTGCTTCAGTTAGTACTTATTAAAGTTTTACCACTTGGAAGATGGTGTC 717
consensus_14903#2      GAAGGCGCAGAAAGCNTGGGAGGTNGCGCAGGCGCCGTTCAAGAACCTGATGATNATG-- 215
                       ***  *       ** *  *      *  *       ** *  *    ** ***  **  

consensus_14903#1      TGTACTAAGCGAAAAATTACCCTGCAGATGGGACAAGT-CTGGTTTTTGTGAGGATCATA 400
consensus_14903#3      TGTACTAAGCGAAAAATTNCCCTGCAGATGGGACAAGTACTGGTTTTTGTGAGGATCATA 222
consensus_14903#0      TGTACTAAGCGAAAAATTACCCTGCAGATGGGACAAGT-CTGGTTTTTGTGAGGATCATA 776
consensus_14903#2      GGTTTCATGATGTNGATGGNCGGGAGCACCGTCCAC---CTNTTTAGCATAGGTATCACG 272
                        **   * *      **   *  *   *  *  **    **  **    *  * ****  

consensus_14903#1      TT-TCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTT 459
consensus_14903#3      TT-TCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTT 281
consensus_14903#0      TT-TCAGCACCTGTACTAAACTTGCACTATATCTTGAGACAAGTAACTTACAATTTCCTT 835
consensus_14903#2      TTCTCCGNTCTTGTTGCAGCCCATCAGCGGNCTNCGTT-----TTGTTGGCAAAGTTTTT 327
                       ** ** *  * ***   *  *   **         *       *   *  ***  *  **

consensus_14903#1      GACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAA 519
consensus_14903#3      GAAAAAAAAAAAAAAA-------------------------------------------- 297
consensus_14903#0      GACCCCTTTTGTTTACCCTGGTTATTTATACAGAGTCAGTTGATTCTTAGTAAAGCTGAA 895
consensus_14903#2      NAACCATTNAAGGACCCAAGGNTGGATA-ATTTAGCACCTAAATTG-------------- 372
                        *                                                          

consensus_14903#1      TTATGTTGTTATAAAAAAAGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTT 579
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      TTATGTTGTTAAAAAAAAAGATTGTTGTCCTGCAGAGGCTCTTGATACCAGCCTTCTTTT 955
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      CCTTAAGGCAATCTTGGTTTGATTATGAGCTGTGAGGCTCAAGATGGAATATGTTGGCCT 639
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      CCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------- 996
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      GTTAGTGCTAGGGACCAATTTGTTGCCCTTATATACAACACCTTTACGTTTTGTTCTGAA 699
consensus_14903#3      ------------------------------------------------------------
consensus_14903#0      ------------------------------------------------------------
consensus_14903#2      ------------------------------------------------------------
                                                                                   

consensus_14903#1      TAAAAAAA 707
consensus_14903#3      --------
consensus_14903#0      --------
consensus_14903#2      --------