cluster # 14908

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14908 cluster # 14908 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14908#0 length = 871 sequences # 14

consensus_14908#1 length = 766 sequences # 3
consensus_14908#2 length = 408 sequences # 1

consensusID : consensus_14908#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 871
fasta sequence

                              [ACGCGTCCACGCAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAGCGA-C-GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG-ATGCTCACGCTCCC-GGCGCCCCGCGC-CGTG-CGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG-CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATTCAACCGTTTGAACAAAAACCTGCAAAAAAAA]

[+] EMBL AK071799             [ACGCGTCCACGCAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAGCGA C GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG ATGCTCACGCTCCC GGCGCCCCGCGC CGTG CGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATTCAACCGTTTGAAC                  ]
[+] EMBL CF309456             [    GTCCACGCAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAGCGA C GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGA GCGGCGGTGGCCGTG ATGCTCACGCTCCC GGCGCCCCGCGC CGTG CGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTG                                                                                                                                                                                                                                                                            ]
[+] EMBL AU166099             [                  GAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAG GACC GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG ATGCTCACGNTCCC GGCGCCCCGCG  CGTG CGGAAG AGATCGTCGGGCTCANCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU077537             [                  GAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAGCGA C GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG ATGCTCACGCTCCC GGCGCCCCGCGC CGTG CGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG CTTTGAGAAAT CATCTTCAAGGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU066297             [                    ccGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAA NGATC GTACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGNAGNCGNCGGTGGCCGTG ATGCTCACGNTCCC GGCGCCCCG GC TG A CGGAAGAAGATCGTCGGGCTCACCTCGATGNTCCTCCAGACATTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU161909             [                                 CTTCTNCCTCTNCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAA CAA C GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTGAATGCTCACGCTCCC GGCGNCCCGCG  CGTGTCGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OS0052A              [                                                                                     GGGTTCGAGAGAGGGTGGGAGGGACCGCGAAA  NA CNGGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG ATGCTCACGCTCCC GGCGCCCCG GCTTGT  CGGAAG AGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATANTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTTCACCGNTGACGAGCGTATCCGNTTTTNAGAAATCCATCTTCAAagnnccaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF311831             [                                                                                              AGAGGGTGGGAGGGACCGCGAAAGCGA C GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGTGGCCGTG ATGCTCACGCTCCC GGCGCCCCGCGC CGTG CGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACCCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTA                                                                                                                                                                                                                       ]
[+] EMBL AU077538             [                                                                                                                                                                                              ATGCTCAGGCTCCCGGGCGCCCCGCGC CGTG CGNAANCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCG CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAAaaaa                                              ]
[-] EMBL CF309457             [                                                                                                                                                                                                                                                                                                                                                                               CGTATCCG CTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATTCAACCGTTTGAACATTTGCCTGCAAAAAAAA]
[+] EMBL AU182072             [                                                                                                                                                                                                                                                                                                                                                                                                           AAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCNCTGAAaaaa                                              ]
[+] EMBL AU223404             [                                                                                                                                                                                                                                                                                                                                                                                                                                            GCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATTCAACCGTTTGAACAAAAA             ]
[+] EMBL AU223416             [                                                                                                                                                                                                                                                                                                                                                                                                                                             CATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATTCAACCGTTTGAACAAAAA             ]
[+] EMBL BE530911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTCTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATTTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTC  TTTTTTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCC                                               ]




>consensus_14908#0
ACGCGTCCACGCAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCA
GCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAGCG
ACGGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAGGCGGCGGT
GGCCGTGATGCTCACGCTCCCGGCGCCCCGCGCCGTGCGGAAGCAGATCGTCGGGCTCAC
CTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGA
TATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGA
GCGTATCCGCTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTC
AGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGC
ATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACACTTACAGGTGGAT
TTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATA
TTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGAT
TTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATG
TCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTTTGTGTTTTAA
CTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGTCATCCTTCAATT
CAACCGTTTGAACAAAAACCTGCAAAAAAAA

consensusID : consensus_14908#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 766
fasta sequence

                              [TTTGGGTTACCCGGCCCCCCCCCTTNGAGGTCCAACCCAACGCGTTCCGGNTTCTAAGAGGGTTNCGAAAAAAGGTTGGAAGGGACCCGCGAAAAGCGACGGACGATGCCGCTGCAGTGGATGATCCTGGCGTNCGTGTTGCCGCCGGAGGCGGCGGTGGCCGTGATGTTCACGCTCCCGCGCCCCGCGCCGTGCGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCGCTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCT-CAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTC----TAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU091610             [TTTGGGTTACCCGGCCCCCCCCCTTNGAGGTCCAACCCAACGCGTTCCGGNTTCTAAGAGGGTTNCGAAAAAAGGTTGGAAGGGACCCGCGAAAAGCGACGGACGATGCCGCTGCAGTGGATGATCCTGGCGTNCGTGTTGCCGCCGGAGGCGGCGGTGGCCGTGATGTTCACGCTCCCGCGCCCCGCGCCGTGCGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCGCTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCT CAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTC    TAAAAAAAAAAAAA             ]
[-] EMBL CF311832             [                                                                                                                                                                                                                    CTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACCCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACAGGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCGCTTTGAGAAATCCATCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCCT CAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTC    TTTAAAAAA                  ]
[+] EMBL AU029767             [                                                                                                                                                                                                                                                                                                                                                                                                           TCAGCATGCCNCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGANACTGAGAAACNCCTNCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTNTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCNNTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14908#1
TTTGGGTTACCCGGCCCCCCCCCTTNGAGGTCCAACCCAACGCGTTCCGGNTTCTAAGAG
GGTTNCGAAAAAAGGTTGGAAGGGACCCGCGAAAAGCGACGGACGATGCCGCTGCAGTGG
ATGATCCTGGCGTNCGTGTTGCCGCCGGAGGCGGCGGTGGCCGTGATGTTCACGCTCCCG
CGCCCCGCGCCGTGCGGAAGCAGATCGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCG
CCGGGATACTCCCCTTCGCGGCCTTCCAGCTCCTCGATATCTACTGGAAGAACGAGCACA
GGTTGATGTGCACCTCCGAGATTTGCACCGCTGACGAGCGTATCCGCTTTGAGAAATCCA
TCTTCAAGGCCCAGAGGAATGTCATTCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCA
TTTTCCGTATTTGCAAGTACAACAAGGATATTAAGGCATTGGAGGAGACTGAGAAACGCC
TCAAGGAAGAGTAGATTAATCACACTTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAG
ATGTATGCAGATAGTTATGTGGGATTCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAA
ATGTTACGCTGTTTCGGCACATGATTTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTC
CGGATTCTCTTTTTTTGTGTTTTAACTTGGGATGATGTCAGTACGATTTCTCGTTTAATT
GTAAGTCGTCCGGATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14908#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence

                              [GAAACGCGTCCACGAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAANACGGGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTNGTGGCGGCGGAGNGGCGGTTGGCTGAGTGCTCACGCTCCCGGCGCCCCCTGCNGGGANAGAGAATACGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTTCCCTTCGCGGCCTTCCAGCTTCTCGATATCTACTTGGAAGAACGAGCACAGGTTTGATGTTCACCTTCGAGATTTTCACCNTTTACGAGGTTATTCCCTTTTTNAGGAATCCATTTTTAAAGGCCAAAGGAATTT]

[+] EMBL C97804               [GAAACGCGTCCACGAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCCCAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAANACGGGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTNGTGGCGGCGGAGNGGCGGTTGGCTGAGTGCTCACGCTCCCGGCGCCCCCTGCNGGGANAGAGAATACGTCGGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTTCCCTTCGCGGCCTTCCAGCTTCTCGATATCTACTTGGAAGAACGAGCACAGGTTTGATGTTCACCTTCGAGATTTTCACCNTTTACGAGGTTATTCCCTTTTTNAGGAATCCATTTTTAAAGGCCAAAGGAATTT]




>consensus_14908#2
GAAACGCGTCCACGAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCCC
CAGCCGCGTCGTCGAGAAGGTTCTAGAGGGTTCGAGAGAGGGTGGGAGGGACCGCGAAAN
ACGGGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTNGTGGCGGCGGAGNGGCGGT
TGGCTGAGTGCTCACGCTCCCGGCGCCCCCTGCNGGGANAGAGAATACGTCGGGCTCACC
TCGATGCTCCTCCAGCCATTCGCCGGGATACTTCCCTTCGCGGCCTTCCAGCTTCTCGAT
ATCTACTTGGAAGAACGAGCACAGGTTTGATGTTCACCTTCGAGATTTTCACCNTTTACG
AGGTTATTCCCTTTTTNAGGAATCCATTTTTAAAGGCCAAAGGAATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14908#0      ---ACGCGTCCACGCAGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCC 57
consensus_14908#2      GAAACGCGTCCACG-AGATCGGAGAGACCGAGGCTGCTTCTTCCTCTTCTTCTTCTTCCC 59
consensus_14908#1      ---------------------------TTTGGGTTAC--CCGGCCCCCCCCCTTNGAGGT 31
                                                      ** * *  *   * *  *  ***      

consensus_14908#0      CCAGCCGCGTCGTCGAGAAGGTTCTA-GAGGGTTC--GAGAGAGGGTGGGAGGGACC-GC 113
consensus_14908#2      CCAGCCGCGTCGTCGAGAAGGTTCTA-GAGGGTTC--GAGAGAGGGTGGGAGGGACC-GC 115
consensus_14908#1      CCAACC-CAACGCGTTCCGGNTTCTAAGAGGGTTNCGAAAAAAGGTTGGAAGGGACCCGC 90
                       *** ** *  **       * ***** *******    * * *** *** ******* **

consensus_14908#0      GAAAGCGAC-GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTGGTGGCGGCGGAG 172
consensus_14908#2      GAAANACG--GGACGATGGCGCTGCAGTGGATGATCCTGGCGTGCGTNGTGGCGGCGGAG 173
consensus_14908#1      GAAAAGCGACGGACGATGCCGCTGCAGTGGATGATCCTGGCGTNCGTGTTGCCGCCGGAG 150
                       ****      ******** ************************ ***  ** ** *****

consensus_14908#0      GCGGCGGTGGCCGTGATGCTCACGCTCCCGGCGCCCCGCGCCGTGCGGAAGCAGATCGTC 232
consensus_14908#2      N-GGCGGTTGGCTGAGTGCTCACGCTCCCGGCGCCCCCTGCNGGGANAGAGAATA-CGTC 231
consensus_14908#1      GCGGCGGTGGCCGTGATGTTCACGCTCCCG-CGCCCCGCGCCGTGCGGAAGCAGATCGTC 209
                         ****** * *    ** *********** ******  ** * *    ** * * ****

consensus_14908#0      GGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAG 292
consensus_14908#2      GGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTTCCCTTCGCGGCCTTCCAG 291
consensus_14908#1      GGGCTCACCTCGATGCTCCTCCAGCCATTCGCCGGGATACTCCCCTTCGCGGCCTTCCAG 269
                       ***************************************** ******************

consensus_14908#0      CTCCTCGATATCTACT-GGAAGAACGAGCACAGGTT-GATGTGCACCTCCGAGATTTGCA 350
consensus_14908#2      CTTCTCGATATCTACTTGGAAGAACGAGCACAGGTTTGATGTTCACCTTCGAGATTTTCA 351
consensus_14908#1      CTCCTCGATATCTACT-GGAAGAACGAGCACAGGTT-GATGTGCACCTCCGAGATTTGCA 327
                       ** ************* ******************* ***** ***** ******** **

consensus_14908#0      CCGCTGACGAGCGTATCCGCTTT--GAGAAATCCATCTTCAAGGCCCAGAGGAATGTCAT 408
consensus_14908#2      CCNTTTACGAGGTTATTCCCTTTTTNAGGAATCCATTTTTAAAGGCCAAAGGAATTT--- 408
consensus_14908#1      CCGCTGACGAGCGTATCCGCTTT--GAGAAATCCATCTTCAAGGCCCAGAGGAATGTCAT 385
                       **  * *****  *** * ****   ** ******* ** ** * *** ****** *   

consensus_14908#0      TCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAA 468
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      TCTTTGTGTTTCAGCATGCCTCCTTTACTGGTGCATTTTCCGTATTTGCAAGTACAACAA 445
                                                                                   

consensus_14908#0      GGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACAC 528
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      GGATATTAAGGCATTGGAGGAGACTGAGAAACGCCTCAAGGAAGAGTAGATTAATCACAC 505
                                                                                   

consensus_14908#0      TTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGAT 588
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      TTACAGGTGGATTTTGTGCTATTCCTGTCCTTCAGATGTATGCAGATAGTTATGTGGGAT 565
                                                                                   

consensus_14908#0      TCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGAT 648
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      TCCCAGTGTATATTGTTCGCCTTGAGGCAAAGAAAATGTTACGCTGTTTCGGCACATGAT 625
                                                                                   

consensus_14908#0      TTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAA 708
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      TTTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTTTGTGTTTTAA 685
                                                                                   

consensus_14908#0      CTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTTTTTT 768
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      CTTGGGATGATGTCAGTACGATTTCTCGTTTAATTGTAAGTCGTCCGGATTCTCTAAAAA 745
                                                                                   

consensus_14908#0      TTTGTGTTTTAACTTGGGATGATGTCTACCAAGAATACATGAGAACCACTGAACCCTGGT 828
consensus_14908#2      ------------------------------------------------------------
consensus_14908#1      AAAAAAAAAAAAAAAAAAAAA--------------------------------------- 766
                                                                                   

consensus_14908#0      CATCCTTCAATTCAACCGTTTGAACAAAAACCTGCAAAAAAAA 871
consensus_14908#2      -------------------------------------------
consensus_14908#1      -------------------------------------------