cluster # 15070

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Oryza sativa
cluster # 15070 cluster # 15070 Sequences # 19 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15070#0 length = 1223 sequences # 10
consensus_15070#1 length = 658 sequences # 3
consensus_15070#2 length = 557 sequences # 2

consensus_15070#3 length = 450 sequences # 1
consensus_15070#4 length = 388 sequences # 1
consensus_15070#5 length = 373 sequences # 1
consensus_15070#6 length = 312 sequences # 1

consensusID : consensus_15070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1223
fasta sequence

                              [TGCACTTCACAGTTCACACCACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCA-TGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGAC-TGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACT-GCTCCTACGCCACCAACTCCTAC-TTCCAGAAGAACAGCCCCATCGGCGCCACCTGCGACTTCGGC-GGCGTCGCCACCCTCACCAACACCGACCCCAGCTCCGGCACCTGCAAGTACCCGGCCACCGCTAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCACTGGCACTGGAGTTGGCACCGGCGGCACCGGCACTGGTGGCGCAGGCGTCGGCGCAGGC-ACCGGCAC-AGGCGTTGGCACA-GGAACCGGCA-CCGGCGCAGGCAT-GGGCACCGGTGCTGGTG-CCGGC-ACCGGGAT-CACGACCCCGGGATCGACCACCGGCACTCAGGGAGGCGCCCTGAGCCCACCGTTTGGCGGCGCATATGGCCCGTCGGCCGGCG-CCATGAACCCCGACTACAACGAGGCCGCGCCGGCGCGCTCCCAGCTGGCCGCCGCCACCTCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAA]

[+] EMBL AK101753             [TGCACTTCACAGTTCACACCACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCA TGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGAC TGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACT GCTCCTACGCCACCAACTCCTAC TTCCAGAAGAACAGCCCCATCGGCGCCACCTGCGACTTCGGC GGCGTCGCCACCCTCACCAACACCGACCCCAGCTCCGGCACCTGCAAGTACCCGGCCACCGCTAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCACTGGCACTGGAGTTGGCACCGGCGGCACCGGCACTGGTGGCGCAGGCGTCGGCGCAGGC ACCGGCAC AGGCGTTGGCACA GGAACCGGCA CCGGCGCAGGCAT GGGCACCGGTGCTGGTG CCGGC ACCGGGAT CACGACCCCGGGATCGACCACCGGCACTCAGGGAGGCGCCCTGAGCCCACCGTTTGGCGGCGCATATGGCCCGTCGGCCGGCG CCATGAACCCCGACTACAACGAGGCCGCGCCGGCGCGCTCCCAGCTGGCCGCCGCCACCTCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTC                                                                                                                                                                                                                              ]
[+] EMBL AU065462             [                    ACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCA TGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGAC TGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACT GCTCCTACGCNANCAACTCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSR15361B            [                    ACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTNTTCTCTGCTGCTGGNNNTGNCACTGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS1239A             [                                       TCCCCACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCA TGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGAC TGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C27583               [                                           CACACCGGCCGGTCTCCTTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTNCTGCTGCTGCTGCCA TGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGTCNGTGCAGAAGGCCATCGACTACGCGTGCTGGCG GGCG CGACTTGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACTNGCTCCTACGGCACCAACTNCTACTTTCCAGAAGAACAGCCCCATCNGCGTCACCTTCGACTTCGGCNGGCGT G CACCn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU085746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGCGCAGGCAACCGGTACAAGGCGTTGGCACAGGGAACCGGNACCCGGCGCAGGTATGGGGCACCGGTNCTGGTGCCCGGCAACCGGGATCCACGACCCCGGGATCGACCACCGGTACTCAGGGAGGCGCCCTGAGCCCACCGTTTGGCGGCGCATATGNCCCGTCGGCCGGCGCCCATGAACCCCGACTACAACGAGGCCGCGCCGGCGCGCTCCCAGCTGGCCGCCGCAACCTCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCCCACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACAAAAAAAAAAAAA                                       ]
[+] EMBL CA757819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGCCACCGCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCATGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTTAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGGCTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAA]
[+] EMBL CF327302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCGCCACCTCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGT      NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                    ]
[+] EMBL AU173169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTCCGTCCTCCTCGCCGCCGCACCATTCCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACAAAAAAA                                             ]
[+] EMBL AU095548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tCCGGAGTTTGGTGGGCATTGCAATGCAGC GCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTNGGACAANAAnn                                             ]




>consensus_15070#0
TGCACTTCACAGTTCACACCACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCC
TTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCATGGCGAT
TCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGT
GTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCG
CGGCGCCGACTGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGT
CGCGCACTGCTCCTACGCCACCAACTCCTACTTCCAGAAGAACAGCCCCATCGGCGCCAC
CTGCGACTTCGGCGGCGTCGCCACCCTCACCAACACCGACCCCAGCTCCGGCACCTGCAA
GTACCCGGCCACCGCTAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCAC
TGGCACTGGAGTTGGCACCGGCGGCACCGGCACTGGTGGCGCAGGCGTCGGCGCAGGCAC
CGGCACAGGCGTTGGCACAGGAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGC
CGGCACCGGGATCACGACCCCGGGATCGACCACCGGCACTCAGGGAGGCGCCCTGAGCCC
ACCGTTTGGCGGCGCATATGGCCCGTCGGCCGGCGCCATGAACCCCGACTACAACGAGGC
CGCGCCGGCGCGCTCCCAGCTGGCCGCCGCCACCTCCGTCCTCCTCGCCGCCGCACCATT
CCTGTTCCATCTCATCTAGAGCCACACAAGGGGGCAGTGGATTCCGTCTCGTCGGTGGTG
GGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATTGCAATGCAGCGGCGTTGCCGGCGT
TGGTGCTTTGTCTCGCCCGCGCTTTCCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCG
ATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTC
TGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGT
GGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTC
GTGGTAGTAGCAGTTTGTGTGTGTTTCGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAATAAAAAAA

consensusID : consensus_15070#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 658
fasta sequence

                              [NANTNGACCTTCTCGGCANNTTTNAGGNAAGNCACCCCTGAAANCCNCCCGTTTTTGGNGGCGNATATTGCCCCGTCCGGNCCGGGCGCCNATGAACCCCGACTAAANTGAGNCCCCCNCCGGTGCGTTTNTNANNTNNCCGCCGCCACNTCNGTCCTTCNTCGNCGCCGNACNATTCCCTNTTCCNATCTCATNTAGAGCCNCACAAGGGGGCANTGGATTCCCGTCNCGTCGGTNNGTNNGGGGCNCACGGCGCCGGCCGGAGTTTGGTGGGCATTTGCAATGCANGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTACCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTACTGTTCAAAAAAAAANGNGTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030214             [NANTNGACCTTCTCGGCANNTTTNAGGNAAGNCACCCCTGAAANCCNCCCGTTTTTGGNGGCGNATATTGCCCCGTCCGGNCCGGGCGCCNATGAACCCCGACTAAANTGAGNCCCCCNCCGGTGCGTTTNTNANNTNNCCGCCGCCACNTCNGTCCTTCNTCGNCGCCGNACNATTCCCTNTTCCNATCTCATNTAGAGCCNCACAAGGGGGCANTGGATTCCCGTCNCGTCGGTNNGTNNGGGGCNCACGGCGCCGGCCGGAGTTTGGTGGGCATTTGCAATGCANGCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTACCGGCCTNTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACNCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGANGAACTCTTCTCCCTCGTGTNCCGGTGACTACCCATCATNCCNTGTGGTGTGTTGTTTGTNCCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTNTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTNCTGTTCNCCGTGTGNNGNGTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU184471             [                                                                                                                                                                                                                                                         ACGGCGCCGGCCGGAGTTTGGTGGGCA TTGCAATGCA GCGGCGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTT CCGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTACTGTTCAAAAAAAAA                                                       ]
[+] EMBL AU184470             [                                                                                                                                                                                                                                                                                                                                           CGGCCTGTGCCGCCACCCCTGCTGGTTTTGATCGATCATCAGTGTATTCAGTAGTGGTNCTGGGAGTNCTCCTTCAGTAGTAGCCTACTCTCTCTGTTATTCAACTGNCGAACTCTTNTCCCTCGTGTGCCGGTGACTACCCATCATACCATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTACTGTTCAAAAAAAAA                                                       ]




>consensus_15070#1
NANTNGACCTTCTCGGCANNTTTNAGGNAAGNCACCCCTGAAANCCNCCCGTTTTTGGNG
GCGNATATTGCCCCGTCCGGNCCGGGCGCCNATGAACCCCGACTAAANTGAGNCCCCCNC
CGGTGCGTTTNTNANNTNNCCGCCGCCACNTCNGTCCTTCNTCGNCGCCGNACNATTCCC
TNTTCCNATCTCATNTAGAGCCNCACAAGGGGGCANTGGATTCCCGTCNCGTCGGTNNGT
NNGGGGCNCACGGCGCCGGCCGGAGTTTGGTGGGCATTTGCAATGCANGCGGCGTTGCCG
GCGTTGGTGCTTTGTCTCGCCCGCGCTTTACCGGCCTGTGCCGCCACCCCTGCTGGTTTT
GATCGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAGTAGCCTACT
CTCTCTGTTATTCAACTGACGAACTCTTCTCCCTCGTGTGCCGGTGACTACCCATCATAC
CATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGATCTAGAGATATT
CTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTACTGTTCAAAAAA
AAANGNGTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15070#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 557
fasta sequence

                              [GCGGGCAGATGGGGCGTTCTGCGTGTTCAAGCCCNACCAGAGTCCGNCGGCGATGCAGAAGGCAATTGACTACGCGTGTTGGCGCAGCGCCGACTGCACCCAGATCATGCAGTCCGGAGCGTGCTACCAGCCCAGCACCATCGGCGGCGGGGGCGAAATCCTCCGGCGCAGACGCGAGCAGACGGCGCACGACGGGGCCGAGCGGACGGCGCGCGGTGGGGCCGAGATGTTGGCGGCGATGGCGGGGTGGTCGACGAGGAGGACGACGACTGAGGAGGCGGGTCCGGGAGCCAACGCTGTCGTCGTCGGGCCCAGCAGCTGCAAGCAACGCCCTCGTCATCGGGCCCTCGCCGCCGCGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGATGTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCACGTCAGCGAAAACCACCCTTAAAATAACCGAGAGAGTTATTTTAGACGATTTTAATAATTCGAGAAATCATCATATCTGGTTTTGTGAAAAAAAAAAAAAA]

[+] EMBL AU082989             [GCGGGCAGATGGGGCGTTCTGCGTGTTCAAGCCCNACCAGAGTCCGNCGGCGATGCAGAAGGCAATTGACTACGCGTGTTGGCGCAGCGCCGACTGCACCCAGATCATGCAGTCCGGAGCGTGCTACCAGCCCAGCACCATCGGCGGCGGGGGCGAAATCCTCCGGCGCAGACGCGAGCAGACGGCGCACGACGGGGCCGAGCGGACGGCGCGCGGTGGGGCCGAGATGTTGGCGGCGATGGCGGGGTGGTCGACGAGGAGGACGACGACTGAGGAGGCGGGTCCGGGAGCCAACGCTGTCGTCGTCGGGCCCAGCAGCTGCAAGCAACGCCCTCGTCATCGGGCCCTCGCCGCCGCGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGATGTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCACGTCAGCGAAAACCACCCTTAAAATAACCGAGAGAGTTATTTTAGACGATTTTAATAATTCGAGAAATCATCATATCTGGTTTTGTGAAAAAAAAAAAAAA]
[+] EMBL C74192               [   GGCAGATGGGGCGTTCTGCGTGTTCAAGCCCGACCAGAGTCCGGCGGCGATGCAGAAGGCAATTGACTACGCGTGTTGGCGCA NNCCGACTGCACCCAGATCATGCAGTCCGGAGCGTGCTACCAGCCCAGCACCATCGGCGGCGGGGGCGAAATCCTCCGGCGCAGACGCGAGCAGACGGCGCACGACGGGGCCGAGCGGACNGCGCGCGGTGGGGCCGAGATGTTGGCGGCGATGGCGGGGTGGTCGA                                                                                                                                                                                                                                                                                                               ]




>consensus_15070#2
GCGGGCAGATGGGGCGTTCTGCGTGTTCAAGCCCNACCAGAGTCCGNCGGCGATGCAGAA
GGCAATTGACTACGCGTGTTGGCGCAGCGCCGACTGCACCCAGATCATGCAGTCCGGAGC
GTGCTACCAGCCCAGCACCATCGGCGGCGGGGGCGAAATCCTCCGGCGCAGACGCGAGCA
GACGGCGCACGACGGGGCCGAGCGGACGGCGCGCGGTGGGGCCGAGATGTTGGCGGCGAT
GGCGGGGTGGTCGACGAGGAGGACGACGACTGAGGAGGCGGGTCCGGGAGCCAACGCTGT
CGTCGTCGGGCCCAGCAGCTGCAAGCAACGCCCTCGTCATCGGGCCCTCGCCGCCGCGCC
CTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGATGTTA
GAGGGAGAGGATGACTAGGCTGCCATATGTACGCCACGTCAGCGAAAACCACCCTTAAAA
TAACCGAGAGAGTTATTTTAGACGATTTTAATAATTCGAGAAATCATCATATCTGGTTTT
GTGAAAAAAAAAAAAAA

consensusID : consensus_15070#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [CGCCACCTCCGTCTTCTTTGCCGCGGCACCATTCTTGTTCCATTTTATTTAGAGCCCCACAAGGGGGCAGTGGATTCCGTTTTGTCGGTGGTGGGGGCGCACGGCCCCGGCCGGAGTTTGGTGGGCATTGCAAAACAACGGGGTTGCCGGGGTTGGTGCTTTGTTTTGCCCGGGCTTTCCGGCCTGTGCCGCCACCCCTGGTGGTTTTGATCGATCATCAGGGTATTCAGTAGTGGGACTGGGAGGACTCCTTCAGTAGTAGCCTACTTTTTTTGTTATTCAAATGACGAACTTTTTTCCCTTGTGGGCCGGTGACTACCCATCAAACCATGTGGTGTGTTGTTTGTACCGGGGCAAATGGGTAGGTGAAAAAAGATTTAAAAATATTTTTTTGTGGTAGAAGCAGTTTGTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF327301             [CGCCACCTCCGTCTTCTTTGCCGCGGCACCATTCTTGTTCCATTTTATTTAGAGCCCCACAAGGGGGCAGTGGATTCCGTTTTGTCGGTGGTGGGGGCGCACGGCCCCGGCCGGAGTTTGGTGGGCATTGCAAAACAACGGGGTTGCCGGGGTTGGTGCTTTGTTTTGCCCGGGCTTTCCGGCCTGTGCCGCCACCCCTGGTGGTTTTGATCGATCATCAGGGTATTCAGTAGTGGGACTGGGAGGACTCCTTCAGTAGTAGCCTACTTTTTTTGTTATTCAAATGACGAACTTTTTTCCCTTGTGGGCCGGTGACTACCCATCAAACCATGTGGTGTGTTGTTTGTACCGGGGCAAATGGGTAGGTGAAAAAAGATTTAAAAATATTTTTTTGTGGTAGAAGCAGTTTGTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15070#3
CGCCACCTCCGTCTTCTTTGCCGCGGCACCATTCTTGTTCCATTTTATTTAGAGCCCCAC
AAGGGGGCAGTGGATTCCGTTTTGTCGGTGGTGGGGGCGCACGGCCCCGGCCGGAGTTTG
GTGGGCATTGCAAAACAACGGGGTTGCCGGGGTTGGTGCTTTGTTTTGCCCGGGCTTTCC
GGCCTGTGCCGCCACCCCTGGTGGTTTTGATCGATCATCAGGGTATTCAGTAGTGGGACT
GGGAGGACTCCTTCAGTAGTAGCCTACTTTTTTTGTTATTCAAATGACGAACTTTTTTCC
CTTGTGGGCCGGTGACTACCCATCAAACCATGTGGTGTGTTGTTTGTACCGGGGCAAATG
GGTAGGTGAAAAAAGATTTAAAAATATTTTTTTGTGGTAGAAGCAGTTTGTGTGTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15070#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 388
fasta sequence

                              [TCGANCTCTTCTCTGCTGCTGCTGCTGCCATGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGACTNGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACTGCTCCTACGCCACCAACTCCTACTTCCAGAAGAACAGCCCATCGGCGCACTNGCGACTTCGCGGCGTCGCANCCTCACCAAACCGACCCANTTCGGACTGAATACCGGCACGTANGGGTAGACCGAATGGACCGGACAGACGGGATTGCATGATTTGACGGG]

[+] EMBL AU030213             [TCGANCTCTTCTCTGCTGCTGCTGCTGCCATGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGACTNGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACTGCTCCTACGCCACCAACTCCTACTTCCAGAAGAACAGCCCATCGGCGCACTNGCGACTTCGCGGCGTCGCANCCTCACCAAACCGACCCANTTCGGACTGAATACCGGCACGTANGGGTAGACCGAATGGACCGGACAGACGGGATTGCATGATTTGACGGG]




>consensus_15070#4
TCGANCTCTTCTCTGCTGCTGCTGCTGCCATGGCGATTCCGTTGCTGCTGCTGCTCTTGC
TGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGG
CGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCGCGGCGCCGACTNGCACCCAGATC
ATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGTCGCGCACTGCTCCTACGCCACC
AACTCCTACTTCCAGAAGAACAGCCCATCGGCGCACTNGCGACTTCGCGGCGTCGCANCC
TCACCAAACCGACCCANTTCGGACTGAATACCGGCACGTANGGGTAGACCGAATGGACCG
GACAGACGGGATTGCATGATTTGACGGG

consensusID : consensus_15070#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence

                              [TATACACTCCACTCAGACTACCTTTCTTCAGTCTAAGCATGTCCAGAATTTTCAGTGCACAATGTCTTCAAGAATTTATAAAGGAGGTTTCTTACTTTCTTTGCTCACTACTACGTCTGATTTTTTGTGTGCAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCACTGGCACTGGAGTTGGCACCGGCGGCACCGGNACTGGTGGCGCAGGCGTCGGCGCAGGCACCGNCACAGGCGTTGGCACAGGAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGCCGGCACCGGGATCACGACCCCGGGATCGANCACCGGTACTCAGGGAGGCGNCCTGAGCCCACCGTTTTGGCGGCGNA]

[+] EMBL C28838               [TATACACTCCACTCAGACTACCTTTCTTCAGTCTAAGCATGTCCAGAATTTTCAGTGCACAATGTCTTCAAGAATTTATAAAGGAGGTTTCTTACTTTCTTTGCTCACTACTACGTCTGATTTTTTGTGTGCAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCACTGGCACTGGAGTTGGCACCGGCGGCACCGGNACTGGTGGCGCAGGCGTCGGCGCAGGCACCGNCACAGGCGTTGGCACAGGAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGCCGGCACCGGGATCACGACCCCGGGATCGANCACCGGTACTCAGGGAGGCGNCCTGAGCCCACCGTTTTGGCGGCGNA]




>consensus_15070#5
TATACACTCCACTCAGACTACCTTTCTTCAGTCTAAGCATGTCCAGAATTTTCAGTGCAC
AATGTCTTCAAGAATTTATAAAGGAGGTTTCTTACTTTCTTTGCTCACTACTACGTCTGA
TTTTTTGTGTGCAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCACTGGC
ACTGGAGTTGGCACCGGCGGCACCGGNACTGGTGGCGCAGGCGTCGGCGCAGGCACCGNC
ACAGGCGTTGGCACAGGAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGCCGGC
ACCGGGATCACGACCCCGGGATCGANCACCGGTACTCAGGGAGGCGNCCTGAGCCCACCG
TTTTGGCGGCGNA

consensusID : consensus_15070#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 312
fasta sequence

                              [CTCGTCATCGGGCCCTCGCCTCCGCGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGATGTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCATGTCAGCGAAAACCCACCCTTTAAACACCGAGAGAGTTATTTCAGATGGTTTTAATAATTCGAGAAATCATTATATCTGGTTTTATAATTTAGGGATACGAGTCAGATTAGACGTATATTTAAGAGTCAATTGGACTTTTTCCCTTCNTTAATTAACCATTGAGTTTGACATCGAAATAAAAAAAAAA]

[+] EMBL BM421629             [CTCGTCATCGGGCCCTCGCCTCCGCGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGATGTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCATGTCAGCGAAAACCCACCCTTTAAACACCGAGAGAGTTATTTCAGATGGTTTTAATAATTCGAGAAATCATTATATCTGGTTTTATAATTTAGGGATACGAGTCAGATTAGACGTATATTTAAGAGTCAATTGGACTTTTTCCCTTCNTTAATTAACCATTGAGTTTGACATCGAAATAAAAAAAAAA]




>consensus_15070#6
CTCGTCATCGGGCCCTCGCCTCCGCGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCG
AGAAGAAGAAAGGAGGAGAGAGATGTTAGAGGGAGAGGATGACTAGGCTGCCATATGTAC
GCCATGTCAGCGAAAACCCACCCTTTAAACACCGAGAGAGTTATTTCAGATGGTTTTAAT
AATTCGAGAAATCATTATATCTGGTTTTATAATTTAGGGATACGAGTCAGATTAGACGTA
TATTTAAGAGTCAATTGGACTTTTTCCCTTCNTTAATTAACCATTGAGTTTGACATCGAA
ATAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      TGCACTTCACAGTTCACACCACCTTCCTTCCTTCCCGACTCCCCACACCGGCCGGTCTCC 60
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      TTCTCGCTGCAGGGAGAGAGAGCTCGAGCTCTTCTCTGCTGCTGCTGCTGCCATGGCGAT 120
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      TCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGATGGGGCGTTCTGCGT 180
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      GTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGACTACGCGTGCTGGCG 240
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      CGGCGCCGACTGCACCCAGATCATGCAGTCCGGCGCGTGCTACCAGCCGAGCACCATCGT 300
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      CGCGCACTGCTCCTACGCCACCAACTCCTACTTCCAGAAGAACAGCCCCATCGGCGCCAC 360
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      CTGCGACTTCGGCGGCGTCGCCACCCTCACCAACACCGACCCCAGCTCCGGCACCTGCAA 420
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      GTACCCGGCCACCGCTAGCGGCGTAGGCACCGGAATGGGAACCGGAACCAGCACCGGCAC 480
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      TGGCACTGGAGTTGGCACCGGCGGCACCGGCACTGGTGGCGCAGGCGTCGGCGCAGGCAC 540
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ----GCGGGCAGATGGGGCGTTCTGCGTGTTCAAGCCCNACCAGAGTCCGNCGGCGATGC 56
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ------------------------------------------------------------
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      CGGCACAGGCGTTGGCACAGGAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGC 600
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      AGAAGGCAATTGACTACGCGTGTTGGCGCAGCGCCGACTGCACCCAGATCATGCAGTCCG 116
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ----NANTNGACCTTCTCGGCANNTTTNAGGNAAGNCACCCCTGAAANCCNCCCGTTTTT 56
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      CGGCACCGGGATCACGACCCCGGGATCGACCACCGGCACTCAGGGAGGCGCCCTGAGCCC 660
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      GAGCGTGCTACCAGCCCAGCACCATCGGCGGCGGGGGCGAAATCCTCCGGCGCAGACGCG 176
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      GGNGGCGNATATTGCCCCGTCCGGNCCGGGCGCCN--ATGAACCCCGACTAAANTGAGNC 114
consensus_15070#3      ------------------------------------------------------------
consensus_15070#0      ACCGTTTGGCGGCGCATATGGCCCGTCGGCCGGCGCCATGAACCCCGACTACAACGAGGC 720
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      AGCAGACGGCGCACGACGGGGCCGAGCGGACGGCGCGCGGTGGGGCCGAGATGTTGGCGG 236
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      CCCCNCCGGTGCGTTTNTNANNTNNCCGCCGCCACNTCNGTCCTTCNTCGNCGCCGNACN 174
consensus_15070#3      -----------------------------CGCCACCTCCGTC-TTCTTTGCCGCGGCACC 30
consensus_15070#0      CGC-GCCGGCGCGCT-CCCAGCTGGCCGCCGCCACCTCCGTC-CTCCTCGCCGCCGCACC 777
consensus_15070#4      ------------------------------------TCGANC--TCTTCTCTGCTGCTGC 22
consensus_15070#5      ----------------------------TATACACTCCACTCAGACTACCTTTCTTCAGT 32
consensus_15070#2      CGATGGCGGGGTGGTCGACGAGGAGGACGACGACTGAGGAGGCGGGTCCGGGAGCCAACG 296
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      ATTCCCTNTTCCNATCTCATN--TAGAGCCNCACAAGGGGGCANTGGATTCCCGTCNCGT 232
consensus_15070#3      ATT--CTTGTTCCATTTTATT--TAGAGCCCCACAAGGGGGCAGTGGATTCC-GTTTTGT 85
consensus_15070#0      ATT--CCTGTTCCATCTCATC--TAGAGCCACACAAGGGGGCAGTGGATTCC-GTCTCGT 832
consensus_15070#4      TGCTGCCATGGCGATTCCGTTGCTGCTGCTGCTCTTGCTGGCCATGTCCACAGGCTCAGA 82
consensus_15070#5      CTAAGCATGTCCAGAATTTTCAGTGCACAATGTCTTCAAGAATTTATAAAGGAGGTTTCT 92
consensus_15070#2      CTGTCGTCGTCGGGCCCAGCAGCTGCAAGCAACGCCCTCGTCATCGGGCCCTCGCCGCCG 356
consensus_15070#6      ------------------------------------CTCGTCATCGGGCCCTCGCCTCCG 24
                                                              *             *      

consensus_15070#1      CGGTNNGTNNGGGGCNCACGGCGCCGGCCGGAGTTTGGTGGGCATTTGCAATGCANGCGG 292
consensus_15070#3      CGGTGG--TGGGGGCGCACGGCCCCGGCCGGAGTTTGGTGGGCATT-GCAAAACAA-CGG 141
consensus_15070#0      CGGTGG--TGGGGGCGCACGGCGCCGGCCGGAGTTTGGTGGGCATT-GCAATGCAG-CGG 888
consensus_15070#4      TGGGGCGTTCTGCGTGTGCAAGCCCGACCAGAGCCCGGCGGCGATGCAGAAGGCCATCGA 142
consensus_15070#5      TACTT---TCTTTGCTCACTACTACGTCTGATTTTTTGTGTGCAGCGGCGTAGGCACCGG 149
consensus_15070#2      CGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGAT 416
consensus_15070#6      CGCCCTTGCCGCCGAACGCCGCCGTCGCTAGCACCGAGAAGAAGAAAGGAGGAGAGAGAT 84
                                    *    *        *         *                      

consensus_15070#1      CGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTTACCGGCCTGTGCCGCCACCCCTG 352
consensus_15070#3      GGTTGCCGGGGTTGGTGCTTTGTTTTGCCCGGGCTTT-CCGGCCTGTGCCGCCACCCCTG 200
consensus_15070#0      CGTTGCCGGCGTTGGTGCTTTGTCTCGCCCGCGCTTT-CCGGCCTGTGCCGCCACCCCTG 947
consensus_15070#4      --CTACGCGTGCTGGCGCGGCGCCG-ACTNGCAC----CCAGATCATGCAGTC-CGGCGC 194
consensus_15070#5      ---AATGGGAACCGGAACCAGCACCGGCACTGGCACT-GGAGTTGGCACCGGCGGCACCG 205
consensus_15070#2      GTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCACGTCAGCGAAAAC-C-ACCC 474
consensus_15070#6      GTTAGAGGGAGAGGATGACTAGGCTGCCATATGTACGCCATGTCAGCGAAAAC-CCACCC 143
                               *    *             *             *          *    *  

consensus_15070#1      CTGGTTTTGAT-CGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAG 411
consensus_15070#3      GTGGTTTTGAT-CGATCATCAGGGTATTCAGTAGTGGGACTGGGAGGACTCCTTCAGTAG 259
consensus_15070#0      CTGGTTTTGAT-CGATCATCAGTGTATTCAGTAGTGGTACTGGGAGTACTCCTTCAGTAG 1006
consensus_15070#4      GTGCTACCAGC-CGAGCACCATCGTCGC--------GCACTG------CTCCTACGCCAC 239
consensus_15070#5      GNACTGGTGGCGCAGGCGTCGGCGCAG---------GCACCGNCACAGGCGTTGGCACAG 256
consensus_15070#2      TTAAAATAACCGAGAGAGTTATTTTAGACGATTTTAATAATTCGAGAAATCATC-----A 529
consensus_15070#6      TTTAAACA-CCGAGAGAGTTATTTCAGATGGTTTTAATAATTCGAGAAATCATT-----A 197
                                                             *             *       

consensus_15070#1      TAGCCTACTCTCTCTGTTATTCAACTGACGAACTC-TTCTCCCTCGTGTGCCGGTGACTA 470
consensus_15070#3      TAGCCTACTTTTTTTGTTATTCAAATGACGAACTT-TTTTCCCTTGTGGGCCGGTGACTA 318
consensus_15070#0      TAGCCTACTCTCTCTGTTATTCAACTGACGAACTC-TTCTCCCTCGTGTGCCGGTGACTA 1065
consensus_15070#4      CAACTCCTACTTCCAGAAGAACAGCCCATCGGCGCACTNGCGACTTCGCGGCGTCGCANC 299
consensus_15070#5      GAACCGGCACCGGCGCAGGCATGGGCACCGGTGCTGGTGCCGGCACCGGGATCACGACCC 316
consensus_15070#2      TATCTGGTTTTGTGAAAAAAAAAAAAAA-------------------------------- 557
consensus_15070#6      TATCTGGTTTTATAATTTAGGGATACGAGTCAGATTAGACGTATATTTAAGAGTCAATTG 257
                        * *                                                        

consensus_15070#1      CCC-ATCATACC-ATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGA 528
consensus_15070#3      CCC-ATCAAACC-ATGTGGTGTGTTGTTTGTACCGGGGCAAATGGGTAGGTGAAAAAAGA 376
consensus_15070#0      CCC-ATCATACC-ATGTGGTGTGTTGTTTGTACCGGTGCAAATGCGTAGGTGAAGAGAGA 1123
consensus_15070#4      CTC-ACCAAACCGACCCANTTCGGACTGAATACCGGCACGTANGGGTAGACCGAATGGAC 358
consensus_15070#5      CGGGATCGANCACCGGTACTCAGGGAGGCGNCCTGAGCCCACCGTTTTGGCGGCGNA--- 373
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      GACTTTTTCCCTTCNTTAATTAACCATTGAGTTTGACATCGAAATAAAAAAAAAA----- 312
                                                                                   

consensus_15070#1      TCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGACATATCTGTGTTA 588
consensus_15070#3      TTTAAAAATATTTTTTTGTGGTAGAAGCAGTTTGTGTGT--------------------- 415
consensus_15070#0      TCTAGAGATATTCTTTCGTGGTAGTAGCAGTTTGTGTGTGTTTCGGAC------------ 1171
consensus_15070#4      CGGACAGACGGGATTGCATGATTTGACGGG------------------------------ 388
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      CTGTTCAAAAAAAAANGNGTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 648
consensus_15070#3      ------AAAAAAAAAAAA-------AAAAAAAAAAAAAAAAAAAAAAA------------ 450
consensus_15070#0      ------AAAAAAAAAAAA-------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA 1218
consensus_15070#4      ------------------------------------------------------------
consensus_15070#5      ------------------------------------------------------------
consensus_15070#2      ------------------------------------------------------------
consensus_15070#6      ------------------------------------------------------------
                                                                                   

consensus_15070#1      AAAAAAAAAA 658
consensus_15070#3      ----------
consensus_15070#0      AAAAA----- 1223
consensus_15070#4      ----------
consensus_15070#5      ----------
consensus_15070#2      ----------
consensus_15070#6      ----------