cluster # 15104

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 15104 cluster # 15104 Sequences # 20 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15104#0 length = 744 sequences # 20
consensusID : consensus_15104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 744
fasta sequence
                              [GGAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA-CCAAC-GACGACGACG-ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG----TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAAAAAGGGGAAAAAAATGAATGCCAGATGCTACAGAGTTGCTGAATTATTGTAAC]

[+] EMBL CF333966             [GGAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF333459             [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF334506             [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF332845             [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF333769             [ GAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACT CGAC ACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF333996             [  AGT GAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF332519             [                  CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGAC ACTCCGAC ACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF337397             [                  CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF335592             [                  CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGGTTGATTGATTGATTGATTGCGAATAGGATATAC                                                                                                                                                                                                          ]
[+] EMBL CF335853             [                  CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATAC                                                                                                                                                                                                          ]
[+] EMBL CF334174             [                  CGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK109325             [                   GTCCAGGAGACGGCCGGCGACGGCGACGGTGACGCCATGGAGGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGGCGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAGAAAGGGGAAAAAAATGAATGCCAGATGCTACAGAGTTGCTGAATTATTGTAAC]
[-] EMBL CF332846             [                                                                                                                                                              GTCGTCCTGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF334507             [                                                                                                                                                                     TGTGGGCTCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGACCCAACGGACGACGACGAACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF333967             [                                                                                                                                                                            TCGCCGGAGTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCGGTCGTGGGCTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACGAACGCTGT AAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF335854             [                                                                                                                                                                                                                                                        CTTCCGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF333460             [                                                                                                                                                                                                                                                            CGAGTACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF335593             [                                                                                                                                                                                                                                                                TACAACATGTTCGACCAGA CCAAC GACGACGACG ACGCTGTGAAGAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGGTTGATTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF333997             [                                                                                                                                                                                                                                                                                                                         ATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAGGAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]
[-] EMBL CF317941             [                                                                                                                                                                                                                                                                                                                                                                                                          ATGTGCGCCGGCAAGGGGAGGACGCTCAAAGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAAATGAACACAGAATTAAGATTATTGATTGATTGG    TTGATTGATTGATTGCGAATAGGATATACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAACTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAATGTACATGTATTACATAAGAAATTAACAAAAA                                                     ]




>consensus_15104#0
GGAGTAGAAACTCTCCGTCGTCCAGGAGACGGCCGGCGACGGCGGCGGCGACGCCATGGA
GGAATTCCAAGAGGCTGACATCCTGTGGCCCGAGCCCGCGGAGGACAACTCCGACGACGG
CGCGGTGGTTGTCACCACGACGCCGTCTCCGGTGGCTCGTCGTCCTGTGGGCTCGCCGGA
GTCGTCGTCGTTGTCTGCTCCGGTGGAGATCGCCGCCTCTCGCCGGAAGCGGCGGTCTCG
GTCGTGGGCTTCCGAGTACAACATGTTCGACCAGACCAACGACGACGACGACGCTGTGAA
GAAGAAGATGATGAATAATGGAGTTATGGTCGCGCCGCCGCACGCCATTGTTGATCGGAG
GAGGCTCCGAGGAAGGACGGCGGCGTACTCCATGTGCGCCGGCAAGGGGAGGACGCTCAA
AGGGCGGGACCTCCGCAACGTCAGGAACCTCGTCCTCCAGATGACCGGATTCATCGAGAA
ATGAACACAGAATTAAGATTATTGATTGATTGGTTGATTGATTGATTGCGAATAGGATAT
ACTGAAACCTGAAGATTTTCAGCTTGCCTGAAGGCTGAAGATATTTGCGGAATGCAATAA
CTCTTTGTTTAATTAATTAATCATCTGTAGGATTGCAAGTTGCTGGCTCGTGGAATAAAT
GTACATGTATTACATAAGAAATTAACAAAAAAAAGGGGAAAAAAATGAATGCCAGATGCT
ACAGAGTTGCTGAATTATTGTAAC
clustalw multiple alignements is not computed in this case