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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15285#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1508 fasta sequence
[GGAAACCGGCGAACTGCCAACATCCCCTGCCCCCATCTGGTAGCTATCTCGTCCTCCGTCCTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGACCTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCCCGACCCCGACCCGATCCGCTCCGCTCCCCATTTGTTTATTCCGGCGCGTGAGCTAATCACCGCGAGGTCCACCGCCGCCGATAACACCCAAGCCAAGCGCGGTCGCTTCCGCGTCTTGATTTCCTCCTCCTCCTCCTCCTCCCACTCGCGTGCGTACCTCCGCCTTATTATATAGCGCTGGCCTGGGCGGGGCGGAAGAGCCAAATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA-GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC-TGATCATGTCACT-GGAACAGGATTAAT-AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG-ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA-CCTC-TTCCTTGAGGTACGATCTACTCCTGG-CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG-AAGGCGATGAT-CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG-CA-TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAACTCTCAGCGAAAGTCGGTTGAAAAAA]
[+] EMBL AK067930 [GGAAACCGGCGAACTGCCAACATCCCCTGCCCCCATCTGGTAGCTATCTCGTCCTCCGTCCTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGACCTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCCCGACCCCGACCCGATCCGCTCCGCTCCCCATTTGTTTATTCCGGCGCGTGAGCTAATCACCGCGAGGTCCACCGCCGCCGATAACACCCAAGCCAAGCGCGGTCGCTTCCGCGTCTTGATTTCCTCCTCCTCCTCCTCCTCCCACTCGCGTGCGTACCTCCGCCTTATTATATAGCGCTGGCCTGGGCGGGGCGGAAGAGCCAAATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT GGAACAGGATTAAT AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTC TTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTT ]
[+] EMBL CB627284 [ CGTCCTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGACCTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCCCGACCCCGACCCGATCCGCTCCGCTCCCCATTTGTTTATTCCGGCGCGTGAGCTAATCACCGCGAGGTCCACCGCCGCCGATAACACCCAAGCCAAGCGCGGTCGCTTCCGCGTCTTGATTTCCTCCTCCTCCTCCTCCTCCCACTCGCGTGCGTACCTCCGCCTTATTATATAGCGCTGGCCTGGGCGGGGCGGAAGAGCCAAATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT GGAACAGGATTAAT AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGAC AAATATACTTCGG ]
[+] EMBL C74518 [ CACGGCACCG CGGCGACCTCGTGGACCTCGCCTGTNGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCCCGACCCCGACCCGATCCGCTCCGCTCCCCATTTGTTTATTCCGGCGCGTGA CGAATCACCGCGAGGTCCACCGCCGCCGATAACACCCAAGCCAAGCGCGGTCG TTCCCCGTCTTGANTTCCTCCTCCT CTTCTCCTTCCANTCGCGTGCGT CCTTCGCCTTATTATATAGCGCTGG CTTGGCGGGGCGGAAAAG CAAATGGTGGCGCT ]
[+] EMBL AK104104 [ GGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT GGAACAGGATTAAT AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTC TTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTT ]
[+] EMBL AK104749 [ CGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT GGAACAGGATTAAT AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTC TTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTT ]
[+] EMBL AU161194 [ CGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCNGNTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCG NG GNANGGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATC ]
[+] EMBL AU062496 [ CGCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTNCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCG CGGTGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTC ]
[+] EMBL OSS2753A [ GCTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGGGNA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGCTTGATCATGTCACTGGGAACAGGATTAATAAAAGACTAA ]
[+] EMBL OSC111311 [ GCTCGTGCCGNCGCCTGATCCCGCACCTGTCCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGGNAA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACAac ]
[+] EMBL AU063249 [ CTCGTGCCGCCGCCTGATCCCGCACCTGTCCGCCTGCNCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGATCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCG CGGANA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT ]
[-] EMBL CB627285 [ CTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCTCCGCCGCGGA GGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACNTACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTGTGGACAGAACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGC TGATCATGTCACT GGAACAGGATTAAT AAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTC TTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAAGTC ]
[+] EMBL AU092204 [ aAAAGNCCGTGATTGCAAAAGTANGCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTCTTTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAA ]
[+] EMBL AU094810 [ GCAAAGCAAAAGCAG ACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAA CCTC TTCCTTGAGGTACGATCTACTCCTGG CCATACTGCTGGCTGTGTGACTTATGTAACAGGTG AAGGCGATGAT CAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTATACAAAGCTCTCAGCGAAAGTCGGTTGAAAAAA]
[+] EMBL C97404 [ AAAGCAGNCCCATTTTATTGANCATGGGGAC NAATATACTTCGGTAACCCTC TTCCNTGAGGTACGATCTACTCCTGGCCCATACTGCTGGCTGTGTGACTTATGTAACAGGTGAAAGGCGATGATCCAACCTTCACCAAGAATGGCTTTTACTGGTGATNCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTG CA TTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCCAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAAaaa ]
[+] EMBL AU097185 [ TTCTGATGAGCTGTATGAGTCGGTGCCATTTCGCAGATTTTCACATTGCC AAGGATACCCTGC TTATCCTGGCCATGACTACAAA GTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAA ]
[+] EMBL CF324101 [ TTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAATTTTTTTTGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTC ]
consensusID : consensus_15285#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 770 fasta sequence
[ACATTGCCAAAGGATNCCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGNGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGNGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTANTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAACCCCTGTCTTCCCTAACCAAACCAAATCTTAAAAAAAAAGGCAAAATCCCCGCCCCAAAAATAAAATCCCCCCAAAAAAAAGCCTAATAAAAATCAATGGCCCGTCTTTAAAAAACGTGGAAATGGAAAAAACCCTGGCTTAACCAAATAAAATCCCTTTGAAAAAAATCCCCTTTTCCCAACTGGGCAAAAAACAAAAAAGCCCCAACCCAACCCCCTTTCCAAAAATTGCCCAACCCAAAACTACCGGAATTTAAAGGTTAACACCAAAAAA]
[+] EMBL AU102163 [ACATTGCCAAAGGATNCCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGNGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGATGTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGNGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAACTCACGGTCAACTCGAGAAGCTCGCAGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTANTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL CF329331 [ GGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAACCCCTGTCTTCCCTAACCAAACCAAATCTTAAAAAAAAAGGCAAAATCCCCGCCCCAAAAATAAAATCCCCCCAAAAAAAAGCCTAATAAAAATCAATGGCCCGTCTTTAAAAAACGTGGAAATGGAAAAAACCCTGGCTTAACCAAATAAAATCCCTTTGAAAAAAATCCCCTTTTCCCAACTGGGCAAAAAACAAAAAAGCCCCAACCCAACCCCCTTTCCAAAAATTGCCCAACCCAAAACTACCGGAATTTAAAGGTTAACACCAAAAAA]
[+] EMBL BM293896 [ ttctaaATCAGCGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGTGCTA ]
consensusID : consensus_15285#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 697 fasta sequence
[AACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAGACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAACCTCTTCCTTGAGGTACGATCTACTCCTGGCCATACTGCTGGCTGTGTGACTTATGTAACAGGTGAAGGCGATGATCAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTGCATTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGTACATGCTACTTTGGCTAATTCTTTACACCCATCTAACTAATAAAAGCTATATTTTTTCTGATATTAATTTACTTGTTATGTTTATAGGAAACATTCAAGAAAATTATGGACAGTAAGTTTCAGAGTCTTTAACATGGGATATGTGCCTTTTCTTCTCGCATCAATTTATGAATATCCATTTTCATTA]
[+] EMBL CF306240 [AACAGTTGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTCTATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGACTAAGTTACCTGGAGTAAAGTCCGTGATTGCAAAAGTAAGCAAAGCAAAAGCAGACCATTTTATTGAGCATGGGGACAAAATATACTTCGGTAACCTCTTCCTTGAGGTACGATCTACTCCTGGCCATACTGCTGGCTGTGTGACTTATGTAACAGGTGAAGGCGATGATCAACCTTCACCAAGAATGGCTTTTACTGGTGATGCCTTGCTTATACGTGCATGTGGAAGGACAGACTTTCAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGGTGCATTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACAAAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAACAAAGGATAAGGTACATGCTACTTTGGCTAATTCTTTACACCCATCTAACTAATAAAAGCTATATTTTTTCTGATATTAATTTACTTGTTATGTTTATAGGAAACATTCAAGAAAATTATGGACAGTAAGTTTCAGAGTCTTTAACATGGGATATGTGCCTTTTCTTCTCGCATCAATTTATGAATATCCATTTTCATTA]
consensusID : consensus_15285#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 236 fasta sequence
[TGGGGTCCCCGGCCAGGGGGAAGAAAGGCGGTGACGCCGCCGCGGGGGCGGCCGCACAGAAGCACGTGGATCCCCGGGCAGCCGGAATCCGGCACGAGGCATCAGGTAGCGATCTCGTCCTCCGTCCTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGACCTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCC]
[+] EMBL CA753490 [TGGGGTCCCCGGCCAGGGGGAAGAAAGGCGGTGACGCCGCCGCGGGGGCGGCCGCACAGAAGCACGTGGATCCCCGGGCAGCCGGAATCCGGCACGAGGCATCAGGTAGCGATCTCGTCCTCCGTCCTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGACCTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15285#0 GGAAACCGGCGAACTGCCAACATCCCCTGCCCCCATCTGGTAGCTATCTCGTCCTCCGTC 60
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CTCACCCGCCGCCGCCGCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTGGAC 120
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CTCGCCTGTCGCCACATCATCGCTGCCGTCGCCTACTCGCCTCCCCTCCCCGACCCCGAC 180
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CCGATCCGCTCCGCTCCCCATTTGTTTATTCCGGCGCGTGAGCTAATCACCGCGAGGTCC 240
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 ACCGCCGCCGATAACACCCAAGCCAAGCGCGGTCGCTTCCGCGTCTTGATTTCCTCCTCC 300
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 TCCTCCTCCTCCCACTCGCGTGCGTACCTCCGCCTTATTATATAGCGCTGGCCTGGGCGG 360
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 GGCGGAAGAGCCAAATGGTGGCGCTGCTTCGCTCGTGCCGCCGCCTGATCCCGCACCTGT 420
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CCGCCTGCGCCGCCGCCGCGCCGTCGTCGTCATCGTCGTGCGCTCCTCGGGCTAGGCCGA 480
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 TCTCGCGGGGACTGCGGCTGCTGCCGGTGGTGCTCGCAATGGCGGGGTACAGCAGCGGCT 540
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CCGCCGCGGAGGGGAGGAGGCTGCTGTTCAGGCAGCTGTTCGAGAAGGAGAGCTCCACCT 600
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 ACACCTACCTCCTCGCCGACGTCGGGGACCCCGAGAAACCCGCCGTGTTGATTGACCCTG 660
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 ------------------------------------------------------------
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 TGGACAGAACAGT-TGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTC 719
consensus_15285#2 -------AACAGT-TGATAGAGATCTCAATCTTATCAAGGAGTTGGGCTTGAAGCTAGTC 52
consensus_15285#1 --------ACATTGCCAAAGGATNCCCTGCTTTATCCTGGCCATGACTACAAAGGT---- 48
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 TATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGACT 779
consensus_15285#2 TATGCTATGAATACCCATGTGCATGCTGATCATGTCACTGGAACAGGATTAATAAAGACT 112
consensus_15285#1 TTCACAGTAAGTAC---TGTTGAAGNGGAGGTTGCGTATAATGCTCGACTAACAAAGGAT 105
consensus_15285#3 -----------------------------TGGGGTCCCCGGC-CAGGGGGAAGAAAGGCG 30
* * * ** ****
consensus_15285#0 AAGTTACC-TGGAGTAAAGTCCGTGATTGC--AAAAGTAAGCAAAGCAAAAGCAGACCAT 836
consensus_15285#2 AAGTTACC-TGGAGTAAAGTCCGTGATTGC--AAAAGTAAGCAAAGCAAAAGCAGACCAT 169
consensus_15285#1 AAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAAAGATGATCGAT 165
consensus_15285#3 GTGACGCCGCCGCGGGGGCGGCCGCACAGAA-GCACGTGG---ATCCCCGGGCAGCCGG- 85
* * * * * * * *
consensus_15285#0 TTTATTGAGCATGGGGACAAAATATAC----TTCGGTAACCTCTTCCTT--GAGGTACGA 890
consensus_15285#2 TTTATTGAGCATGGGGACAAAATATAC----TTCGGTAACCTCTTCCTT--GAGGTACGA 223
consensus_15285#1 GTAGCCGTGCCCGCGAATTTGCTCTGCGGTATTCAGGATCCTCCACCATCCAAGGTCTGN 225
consensus_15285#3 --AATCCGGCACGAGGCATCAGGTAGCGAT-CTCGTCCTCCGTCCTCACCCGCCGCCGCC 142
** * * * ** ** * *
consensus_15285#0 TCTACTCCTGGCCATACTGCTG-GCTGT--GTGA-CTTATG--TAACAGGTGAAGGCGAT 944
consensus_15285#2 TCTACTCCTGGCCATACTGCTG-GCTGT--GTGA-CTTATG--TAACAGGTGAAGGCGAT 277
consensus_15285#1 GCTGTTCCGGCTGAAGCTTTCAAGCTGTT-GTGAACTCACGGTCAACTCGAGAAGCTCGC 284
consensus_15285#3 GCGACCGCGAGCTAAACCACGGCACCGCCGGCGACCTCGTG--GACCTCG-----CCTGT 195
* * * * * * * ** ** * * * *
consensus_15285#0 GATCAACCTTCACCAAGAATGGCTTTT-----ACTGGTGATGCCTTGCTT----ATACGT 995
consensus_15285#2 GATCAACCTTCACCAAGAATGGCTTTT-----ACTGGTGATGCCTTGCTT----ATACGT 328
consensus_15285#1 AGCTATGTTGTACATTAAATAATCTGTTGTTAATTTGTAAGGCACTANTTGGGAACATTT 344
consensus_15285#3 CGCCACATCATCGCTGCCGTCGCCT-------ACTCGCCTCCCCTCCC------------ 236
* * * * * * *
consensus_15285#0 GCATGTGGAAGGACAGACTTT-----CAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGG 1050
consensus_15285#2 GCATGTGGAAGGACAGACTTT-----CAGGGAGGAAGTTCTGATGAGCTGTATGAGTCGG 383
consensus_15285#1 CCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTAGCTTGCCTCTTGTCTTGT 404
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 TGCATTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACA 1110
consensus_15285#2 TGCATTCGCAGATTTTCACATTGCCAAAGGATACCCTGCTTTATCCTGGCCATGACTACA 443
consensus_15285#1 GCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 464
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 AAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAA--CAAA 1168
consensus_15285#2 AAGGTTTCACAGTAAGTACTGTTGAAGAGGAGGTTGCGTATAATGCTCGACTAA--CAAA 501
consensus_15285#1 AAAAAAAAAAAAAAAAAAAAATTAAAAAAAAACCCCTGTCT--TCCCTAACCAAACCAAA 522
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 GGATAAGGAAACATTCAAGAAAATTATGGACAACTTGAACTTGGCCTATCCAA----A-G 1223
consensus_15285#2 GGATAAGGTA-CATGC-----TACTTTGGCTAATTCT--TTACACCCATCTAA----CTA 549
consensus_15285#1 TCTTAAAAAAAAAGGCAAAATCCCCGCCCCAAAAATAAAATCCCCCCAAAAAAAAGCCTA 582
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 ATGATCGATG-TAGCCGTGCCCGCG--AATTTGCTC-TGCGGTATTCAGGATCCTCCACC 1279
consensus_15285#2 ATAAAAGCTA-TATTTTTTCTGATATTAATTTACT--TGTTATGTTTATAGGAAACATTC 606
consensus_15285#1 ATAAAAATCAATGGCCCGTCTTTAAAAAACGTGGAAATGGAAAAAACCCTGGCTTAACCA 642
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 ATCCAAGGTCTGAGCTGTTCCGGCTGAAGCTTTCAAGCTGTTGTGAAC----TCACGGTC 1335
consensus_15285#2 AAGAAAATTATGGACAGTAAGTTTCAGAGTCTTTAACATGGGATATGT----GCCTTTTC 662
consensus_15285#1 AATAAAATCCCTTTGAAAAAAATCCCCTTTTCCCAACTGGGCAAAAAACAAAAAAGCCCC 702
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 AACTCG-AGAAGCTCGCAGCTATGT-TGTACATTAAATAATCTGTTGTTAATTTGTAAGG 1393
consensus_15285#2 TTCTCGCATCAATTTATGAATATCCATTTTCATTA------------------------- 697
consensus_15285#1 AACCCAACCCCCTTTCCAAAAATTGCCCAACCCAAAACTACCGGAATTTAAAGGTTAACA 762
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 CACTACTTGGGAACATTTCCGCTTCATGAGATCAACGGTAATAATAATAAACAGAGGCTA 1453
consensus_15285#2 ------------------------------------------------------------
consensus_15285#1 CCAAAAAA---------------------------------------------------- 770
consensus_15285#3 ------------------------------------------------------------
consensus_15285#0 GCTTGCCTCTTGTCTTGTGCTAAAAAAAACTCTCAGCGAAAGTCGGTTGAAAAAA 1508
consensus_15285#2 -------------------------------------------------------
consensus_15285#1 -------------------------------------------------------
consensus_15285#3 -------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||