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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15335#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1766 fasta sequence
[GCAAAAGATTTAAACCTTTTTCCTTTACGAAAGACGCATACGCACGCGCACCGCTATGTACATGCACCACGCGTTAATACCCACGTATTCAGAGAGACGGAAACCAACGGCAAATACTTGGTCTCACTAGAATTTAACTTACCTAATTGTTTGATTGAAATTAATGTACTCTTGAATGGATAAATTAGGTAGTTATAAACAAAAAAAATGAAACAAGTAATACCGACAAGAACATGTCATCTGCTCACCTGAATACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC-GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG-TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGTAGACGCCCCAGTGGCAGAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCACCCGCGCCGTCGCGTCGGCGCCCGCCGCGGCCACGTTCGACATGAACTGCGGCAGCAGCA-GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAGCGGTCGCGGAACGCCGGCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGGCCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCG-CCGAGCTCCACGATGACGTC-GGGCC-GCACCTCCTCGATCAGCTCCGCGAACACCGC-GCCGGTCGAGCCCCACCC-GCGCGGCCTCGCCGCAG-CCGGGTGCAGC-AGCGCGGCGGTGTGCGGCGGCGGGAAGCTCTC-GTACGGGCTCTCCCCGTCG-AACAGCTTGTCG-AGGAGCGTCC-GCACGACGGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC-GTGCGGCGGCGAGCGCGGGTAGTTCGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG-GTGCGCGGCGCGCGGCCGTA-T-GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTTCGCAACAAGACTCTCTCTGCTCTCCCTGTAGTCTCTTAGCTAACCTATATATATATATCTCATTTATTCTTTGGAGATTAGTTTAAACCTAGAATTTCTTTCAAGATTGGATAGCATATATGCTTGCAGATAGAGTGATAGAGAAGGGAGAGGGATTCAGGATTAGTAGTAGTGGTTGTTACTTTATTACATGAAGTTTGTTTTCTTTAGAGAAGATATATACTATTAGATATAAACTATACTAGTAAAAA]
[+] EMBL CB654120 [GCAAAAGATTTAAACCTTTTTCCTTTACGAAAGACGCATACGCACGCGCACCGCTATGTACATGCACCACGCGTTAATACCCACGTATTCAGAGAGACGGAAACCAACGGCAAATACTTGGTCTCACTAGAATTTAACTTACCTAATTGTTTGATTGAAATTAATGTACTCTTGAATGGATAAATTAGGTAGTTATAAACAAAAAAAATGAAACAAGTAATACCGACAAGAACATGTCATCTGCTCACCTGAATACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGTAGACGCCCCAGTGGCAAAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCACCCGCGC ]
[-] EMBL AU222982 [ ttttttTGGATAAATTAGGTAGTTATAAACAAAAAAAATGAAACAAGTAATACCGACAAGAACATGTCATCTGCTCACCTGAATACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGC ]
[-] EMBL AK072714 [ CCTGAATACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGTAGACGCCCCAGTGGCAGAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCACCCGCGCCGTCGCGTCGGCGCCCGCCGCGGCCACGTTCGACATGAACTGCGGCAGCAGCA GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAGCGGTCGCGGAACGCCGGCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGGCCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCG CCGAGCTCCACGATGACGTC GGGCC GCACCTCCTCGATCAGCTCCGCGAACACCGC GCCGGTCGAGCCCCACCC GCGCGGCCTCGCCGCAG CCGGGTGCAGC AGCGCGGCGGTGTGCGGCGGCGGGAAGCTCTC GTACGGGCTCTCCCCGTCG AACAGCTTGTCG AGGAGCGTCC GCACGACGGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC GTGCGGCGGCGAGCGCGGGTAGTTCGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG GTGCGCGGCGCGCGGCCGTA T GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTTCGCAACAAGACTCTC ]
[-] EMBL AU182397 [ tttttttTACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCG ]
[-] EMBL AU181911 [ ttttTACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAANAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGNGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGC ]
[-] EMBL AU223116 [ ttttTTTTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGNGGTCGTTNGGCGGCGGTGAAGTAGTCGTGNCCGAACATGACNCCCCCGGGGC ]
[-] EMBL AU108456 [ ttttTTTTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATTCACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTC CCGAGTGCGTGGCCCCGCCGGCGA CGAGCTTTTCGCCGGCGAGGAGTCACCGGCCAGTCGCGGCGGA CGGCGGCTTCGGGGANAGGAC ]
[+] EMBL CB645774 [ GTGTATGAATTTGGT CCCTTTAACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGTAGACGCCCCAGTGGCAGAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCACCCGCGCCGTCGCGTCGGCGCCCGCCGCGGCCACGTTCGACATGAACTGCGGCAGCAGCA GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAGCGGTCGCGGAACGCCGGCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGGCCGC ]
[-] EMBL CF325906 [ GTATAAATTCCCAGTCCAAAGTAGAAGACCCAAATTCTTGAATTGATTCTTGTGTAAGAATGAAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCCCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGAAGTCACCGCCC GTCCCGGCGAACCGCCGGTTT ]
[+] EMBL AK111425 [ GAGCTTTGAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACGTCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGCC GTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGGTGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCG TCGGCGGCGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGTTGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGTAGACGCCCCAGTGGCAGAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCACCCGCGCCGTCGCGTCGGCGCCCGCCGCGGCCACGTTCGACATGAACTGCGGCAGCAGCA GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAGCGGTCGCGGAACGCCGGCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGGCCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCG CCGAGCTCCACGATGACGTC GGGCC GCACCTCCTCGATCAGCTCCGCGAACACCGC GCCGGTCGAGCCCCACCC GCGCGGCCTCGCCGCAG CCGGGTGCAGC AGCGCGGCGGTGTGCGGCGGCGGGAAGCTCTC GTACGGGCTCTCCCCGTCG AACAGCTTGTCG AGGAGCGTCC GCACGACGGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC GTGCGGCGGCGAGCGCGGGCAGTTCGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG GTGCGCGGCGCGCGGCCGTA T GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTTCGCAACAAGACTCTCTCTGCTCTCCCTGTAGTCTCTTAGCTAACCTATATATATATATCTCATTTATTCTTTGGAGATTAGTTTAAACCTAGAATTTCTTTCAAGATTGGATAGCATATATGCTTGCAGATAGAGTGATAGAGAAGGGAGAGGGATTCAGGATTAGTAGTAGTGGTTGTTACTTTATTACATGAAGTTTGTTTTCTTTAGAGAAGATATATAC ]
[+] EMBL OSS14437A [ nctacGCAGCA GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAG GGTCGCGGAACG CGNCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGGNCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCG NCGAGCTCCACGATGACGTC GGGCC GCACCTCCTCGATCAGCTCCGCGAACACCGC GTCGGTCGAGCCCCACCC GCGCGGNCTCG CGAAGCCCGGGTGCAAC AGCGCGGCGGTGTGCGGCGNCGTGAAGt ]
[+] EMBL OSS15125A [ natgaCAGCACGCNCATCGCCGTGGCGCGGC GCGGGACGTCGCGGCGGAAG GGTCGCGGAACG CGGCCAGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCAAGAGGTTCTTGGACACGGCCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCG CCGAGCTCCACGATGACGTC GGGCC GCACCTCCTCGATCAGCTCCGCNAACACCGC GCCGGTCGAGCCCCACCC GCGCGGCCTCGCCG AG CCGGGTGCAGC AGCGCGGCGGTNTNCGGCGGCGGGAAGCTCTC GTACGGGCTCTTCCCGTCG AACAGCTTTTNG AGGAGCGTCC ]
[-] EMBL AU222975 [ CAGCGCNGACGCGCCCAGGAAGGCGCCCGAGCTCCACGATGACGTCAGGGCCTGCACCTCCTCGATCAGCTCCGCGAACACCGCTGCCGGTCGAGCCCCACCCTGCGCGGCCTCGCCGCAG CCGGGTGCAGC AGCGCGGCGGTGTGCGGCGGCGGGAAGCTCTCAGTACGGGCTCTCCCCGTCG AACAGCTTGTCG AGGAGCGTCCAGCACGACGGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATCAGTGCGGCGG ]
[-] EMBL OSS13164A [ CGATCA CTNC CGAACA CNC GCCGGTC AACCCCACCC NC CGGCCTCGCCGAAN CC GGTTCAACAACCCCGGCGTTGT CGGCGCCGGNAAGCTCTC GTAC GGCTCTCCNCGTCG AACAGCTTGTCG AGGAACGTCC GCACGACGGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC GTGCGNCGGCGAGCGCGGGTAGTTCGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAGNGTGC CGGCGCGCGGCCGTANT GNAC NCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGAT ]
[-] EMBL OSS13765A [ nGGCCTCGCCG AA CC GGTTCAAC AACCCGGC GTTTTCGGCNGCGGGAAACTCTC NTACGGGCTCTCCCCGTCGAAANATCTTGTCGAAGGATCGTCC GCACGACGGCGTCGCTGGTTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC GTGCGGCGGCGACCGCGGGTAGTTCGCCNTCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGCCGGTGCCGGAGAG GTNC CGCCGCGCGGCCGTA TGGACC TCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTT ]
[-] EMBL OSS3979A [ C GTACGGNTTCTCCCCGTCG AACAGCTTGTCG AGGANCGTCC GCACGACGCCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATC GTGCGGCGGCGAGCGCGGGTAGTTCGCCGCCNCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG GTNC CGGCGCGCGGCCGTA TNGNAC CTGCGACGGCTTGCTNGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAANACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTT ]
[-] EMBL AU222981 [ ACTCCTCCCTGAACCGGAACAGATC GTNCGNCGGCGAGCGCGGGTAGTTCGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG GTGCGCGGCGCGCGGCCGTA T GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGG ]
[-] EMBL CB645773 [ GCGCGGGTAGTTAGCCGCCGCCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAG GTGCGCGGCGCGCGGCCGTA T GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTACGGGATCA ]
[+] EMBL AU174075 [ CGGCCGTA T GACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCGGCTTCATGATCACTTCGCAACAAGACTCTCTCTGCTCTCCCTGTAGTCTCTTAGCTAACC TATATATATATCTCATTTATTCTTTGGAGATTAGTTTAAACCTAGAATTTCTTTCAAGATTGGATAGCATATATGCTTGCAGATAGAGTGATAGAGAAGGGAGAGGGATTCAGGATTAGTAGTAGTGGTTGTTACTTTATTACATGAAGTTTGTTTTCTTTAGAGAAGATATATACTATTAGATATAAACTATACTAGTAAAAA]
[-] EMBL OSS3840A [ tatggancCTGCGACGNCTTGCTCGCAGGCGGNCGGATGGACGACGACATGATGCCAACCGAGTACCCGGCGGAGAANACGATCAGGAACACGGTGAGCCGGGTGAGGTGCGGNCGGAGCCTCGCCGGAACGCCGNCGGAAGNCGCCGNCGCCGGAGACGGACNCGNCTTCATGATCACTT ]
consensusID : consensus_15335#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 332 fasta sequence
[CCGGCGCTGTCGGCGGCGGAACTCTCGTACGGCTCTCCACGTCGAACAACTTGTCGAGGACGTCGCACACGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATCGTTCGACGTCGAGCGCGGGTAGTTCGCCGNCGACGCAGCGCTGNCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGNCGGAGAGGTCCGGCGCGCGGGCGTATTGNACCTGCGTCGNCTTGCTCGCAGTCGATCGGATGGNCGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGTAGG]
[-] EMBL OSS12040A [CCGGCGCTGTCGGCGGCGGAACTCTCGTACGGCTCTCCACGTCGAACAACTTGTCGAGGACGTCGCACACGCGTCGCTGGGTATCGCCTCGCCACACTCCTCCCTGAACCGGAACAGATCGTTCGACGTCGAGCGCGGGTAGTTCGCCGNCGACGCAGCGCTGNCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGNCGGAGAGGTCCGGCGCGCGGGCGTATTGNACCTGCGTCGNCTTGCTCGCAGTCGATCGGATGGNCGACGACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGTAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15335#0 GCAAAAGATTTAAACCTTTTTCCTTTACGAAAGACGCATACGCACGCGCACCGCTATGTA 60
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CATGCACCACGCGTTAATACCCACGTATTCAGAGAGACGGAAACCAACGGCAAATACTTG 120
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 GTCTCACTAGAATTTAACTTACCTAATTGTTTGATTGAAATTAATGTACTCTTGAATGGA 180
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TAAATTAGGTAGTTATAAACAAAAAAAATGAAACAAGTAATACCGACAAGAACATGTCAT 240
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CTGCTCACCTGAATACATTGTAGTACGTATGATCTCGTGTGTATGAATTTGGTATAAATT 300
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CACAGTACAAAGTAGAAGAACCAAATTCTTGAATTGATTCTTGTGTAAGAATGGAGCTTT 360
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 GAAAAAAGGGTGGTGGTTGGGAGTTTTTGAGACGAACACGTGTCGGGCGCCGACGTCACG 420
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TCGCCGAGTGCGTGGCCCCGCCGGCGACGGCGAGCTTTTCGCCGGCGAGGAGTCACCGGC 480
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CGTCGCGGCGGAGCGGCGGCTTCGGGGAGAGGACCCAGTGCTGGCCGTGCGGCCGGACGG 540
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TGAGGCCCTTCACCCTGGCGAACAGCGTCACGGCTCGCCGGACGCCGCGGTCGTCGGCGG 600
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CGGTGAAGTAGTCGTGGCCGAACATGACGCCGCCGGGGCGGAGCACGGCCCAGGCGAGGT 660
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TGATGTCCGCCCACGCCGAGTGGAAGTCGTGGCCGGCGTCCACCTCGATGAGGTCGGCGT 720
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 AGACGCCCCAGTGGCAGAGCGCGGCGAGCGCGGACGCCGTCGAGAAGGGGAGCGGGAGCA 780
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CCCGCGCCGTCGCGTCGGCGCCCGCCGCGGCCACGTTCGACATGAACTGCGGCAGCAGCA 840
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 GCGCATCGCCGTGGCGCGGCGGCGGGACGTCGCGGCGGAAGCGGTCGCGGAACGCCGGCC 900
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 AGCCGCGGAAGTCGTCGACGCAGAGGATGGCCGGGGACAGCGAGAGGTTCTTGGACACGG 960
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CCGCCATGTGCAGCGCCGACGCGCCCAGGAAGGCGCCGAGCTCCACGATGACGTCGGGCC 1020
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 GCACCTCCTCGATCAGCTCCGCGAACACCGCGCCGGTCGAGCCCCACCCGCGCGGCCTCG 1080
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 CCGCAGCCGGGTGCAGCAGCGCGGCGGTGTGCGGCGGCGGGAAGCTCTCGTACGGGCTCT 1140
consensus_15335#1 --------------------CCGGCGCTGT-CGGCGGCGG--AACTCTCGTACGG-CTCT 36
***** *** ********* * *********** ****
consensus_15335#0 CCCCGTCGAACAGCTTGTCGAGGAGCGTCCGCACGACGGCGTCGCTGGGTATCGCCTCGC 1200
consensus_15335#1 CCACGTCGAACAACTTGTCGAGGA-CGTC-GCACAC--GCGTCGCTGGGTATCGCCTCGC 92
** ********* *********** **** **** **********************
consensus_15335#0 CACACTCCTCCCTGAACCGGAACAGATCGTGCGGCGGCGAGCGCGGGTAGTTCGCCGCCG 1260
consensus_15335#1 CACACTCCTCCCTGAACCGGAACAGATCGTTCGACGTCGAGCGCGGGTAGTTCGCCGNCG 152
****************************** ** ** ******************** **
consensus_15335#0 CCGCAGCGCTGCCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGCCGGAGAGGTGCG 1320
consensus_15335#1 ACGCAGCGCTGNCGTTGCTCGCCGGGACATCCGTGGAGGAGGCGGTGNCGGAGAGGTCCG 212
********** *********************************** ********* **
consensus_15335#0 CGGCGCGCGGCCGTATGACCGTCTGCGACGGCTTGCTCGCAGGCGGCCGGATGGACGACG 1380
consensus_15335#1 --GCGCGCGGGCGTATTGN-ACCTGCGTCGNCTTGCTCGCAGTCGATCGGATGGNCGACG 269
******** ***** ***** ** *********** ** ******* *****
consensus_15335#0 ACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGA 1440
consensus_15335#1 ACATGATGCCAACCGAGTACCCGGCGGAGAAGACGATCAGGAACACGGTGAGCCGGGTGT 329
***********************************************************
consensus_15335#0 GGTGCGGCCGGAGCCTCGCCGGAACGCCGCCGGAAGACGCCGCCGCCGGAGACGGACGCG 1500
consensus_15335#1 AGG--------------------------------------------------------- 332
*
consensus_15335#0 GCTTCATGATCACTTCGCAACAAGACTCTCTCTGCTCTCCCTGTAGTCTCTTAGCTAACC 1560
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TATATATATATATCTCATTTATTCTTTGGAGATTAGTTTAAACCTAGAATTTCTTTCAAG 1620
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 ATTGGATAGCATATATGCTTGCAGATAGAGTGATAGAGAAGGGAGAGGGATTCAGGATTA 1680
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 GTAGTAGTGGTTGTTACTTTATTACATGAAGTTTGTTTTCTTTAGAGAAGATATATACTA 1740
consensus_15335#1 ------------------------------------------------------------
consensus_15335#0 TTAGATATAAACTATACTAGTAAAAA 1766
consensus_15335#1 --------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||