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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15349#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1461 fasta sequence
[GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT-CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA-TGGGTGCTAATCCA-GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA-GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA-CTGGTAAGATGTTCTGATTGCTATGCTCCA-AAATTGCTTCCA-TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA-GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA-CACTGTTTGTTATATTTAAAGAATAAAGCATATA-TTTCTG-CCA-TTGGAAATAAAGG-TTTATATACATTTGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK071811 [GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTC ]
[+] EMBL CB653633 [ TCCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAA ]
[+] EMBL OSS2181A [ CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGG ACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGTGCAGGGCGTTG ]
[+] EMBL CB646525 [ CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCAT ]
[+] EMBL CB629871 [ CGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCACCGCCGGGAAGATCGGGAGCTCCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCGGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCA ]
[+] EMBL CB639053 [ CCGGAGTTCCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGATGTGTTTATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTC AAAGAAGAAT TGGAAAAATTGGCA ]
[+] EMBL CB660261 [ TTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGAT ]
[+] EMBL CF306682 [ TCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCA ]
[-] EMBL CB646526 [ TCTAGGAACTGGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTC ]
[-] EMBL CB653634 [ AAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCA AAAAAAAAAAAGG ]
[-] EMBL CB660262 [ GGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCCCAGGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTTTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTTTAAAAAGGAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGAGGGTTAATGTAAAACCACTGTTTGTTATATTTAAAGAAAAGGGCATAT ]
[-] EMBL CB639052 [ AGG ATAGGTCCATGCTTTCTCTGTNTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAA ]
[-] EMBL CB639062 [ atagGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATA A TTTCTG CCAaaaaaaa ]
[+] EMBL CB096846 [ TCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCAAAGCAGATGGNTAATGTAAAA CACTGTTCGTTATATTTAAAGAATAAAGCATATATTTTCTG CCATTTGGAAATAAAGGNTTTATATACATTTGATGTAA ]
[+] EMBL BI801518 [ AACATTGAAAATGCTAAGGGCTTA GTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCC AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGAC AAATTC AAGCAGATGGTTAATGTAAAA CCCTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCAaaa ]
[+] EMBL BI813040 [ GGCTTAGGTTAT CCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGC ACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCA GCTAAGTGGGAA GGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCC AAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGACAAAATTC AAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAA ]
[+] EMBL BI807367 [ ACAGC ACAGGCATTGTCCTTGAT CCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACACTGGGTGCTAATCCA GCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACACGGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCCAAGATGGAACCTGGTAAGATGTTCTGATTGCTATGCTCCACAAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTC AAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAAAAAAAA ]
[+] EMBL BM421486 [ TTGTCCTTGATGCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACA TGGGTGCTAATCCAGGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACA GGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGC AAGATGGAA CTGGTAAGATGTTCTGATTGCTATGCTCCC NAATTGCTTCCACTTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTC ATTTGTACGAC AAATTCAAAGCAGATGGTTAATGTAAAA C CTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTGCCCT TTGGAAATAAAGG TTTATATACATTTGATGTAAAAA ]
[+] EMBL AU097103 [ ATGTTCTGATTGCTATGCTCCA AAATTGCTTCCA TTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAA GAGTATTCGCCTCAATTTGTACGACAAAATTCNAAGCAGATGGTTAATGTAAAA CACTGTTTGTTATATTTAAAGAATAAAGCATATA TTTCTG CCATTTGGAAATAAAGG TTTATATACATTTGATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15349#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence
[GAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT]
[+] EMBL CB639051 [GAGTTTCCGCCGCCTCCGCCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT]
consensusID : consensus_15349#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence
[CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAAGATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTCCCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAATNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA]
[+] EMBL OSS2203A [CCACGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAAGATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTCCCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAATNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15349#0 GACTGTAGCTGCTGCCCCGACGCGCTGCTCGCTGCCCCACTCTCTCCCCATTCCCCTCCA 60
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ---------------------------------------------------------CCA 3
consensus_15349#0 CGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGCCGCCTCCGCCGCCGGGAA 120
consensus_15349#1 --------------------------------GAGTTTCCGCCGCCTCCGCCGCCGGGAA 28
consensus_15349#2 CGCCGCCGCCGCCGCCGCCGCGTGGATGGCCGGAGTTTCCGNCGACTNCGNCGNNGGNAA 63
********* ** ** ** ** ** **
consensus_15349#0 GATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTC 180
consensus_15349#1 GATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTC 88
consensus_15349#2 GATCGGNAGCTTCCTCTCCAAGAGGCCGTACGCGNCGCCGTCCTGGGCCTCGCACCTGTC 123
****** *************************** *************************
consensus_15349#0 CCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAA 240
consensus_15349#1 CCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAA 148
consensus_15349#2 CCCCGNCCNCTNGCAGACCTTCTNGNTCGGCCATTTCCCGACGTCGATCCANAAGTNGAA 183
***** ** ** *********** * ***************** ******* **** ***
consensus_15349#0 TCTGCCCAATTTGCCGAATGGCACGGAGGTGTG-GATCAAGCGAGACGACATCTCAGGCA 299
consensus_15349#1 TCTGCCCAATTTGCCGAATGGCACGGAGGTGTG-GATCAAGCGAGACGACATCTCAGGCA 207
consensus_15349#2 TNTNNCCAATTTGNCGAATNGACTGGNGGTTTNTGTTCAAGTTANATGANATATTATGCA 243
* * ******** ***** * ** *** * * ***** * * ** ** * * ***
consensus_15349#0 TGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGC 359
consensus_15349#1 TGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCAGATGCCGTCGCGC 267
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 AGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCG 419
consensus_15349#1 AGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCG 327
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 CAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTC 479
consensus_15349#1 CAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTC 387
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGC 539
consensus_15349#1 TTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGC 447
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 ATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACT 599
consensus_15349#1 ATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACT 507
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGAT 659
consensus_15349#1 TGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGAT 567
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 CAAACTCTCTAGGAACTTGGGGATATATAGAAG-CAATAAGGGAGATTGAAC-ATCAAAT 717
consensus_15349#1 CAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATT---- 623
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAAC 777
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 CATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTT 837
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 CTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACT 897
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTA 957
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCAT 1017
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TGTCCTTGATCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACATGGGTGC 1077
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TAATCCAGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACAGGTGGTCTTCTTGG 1137
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCT 1197
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TGAAGAATCTGTTCCACGCAAAGATGGAACTGGTAAGATGTTCTGATTGCTATGCTCCAA 1257
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 AATTGCTTCCATTGTTGTTAGAGGTTTCAGACATCTCATTGTCTAAAAAGAGTATTCGCC 1317
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 TCAATTTGTACGACAAAATTCAAAGCAGATGGTTAATGTAAAACACTGTTTGTTATATTT 1377
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 AAAGAATAAAGCATATATTTCTGCCATTGGAAATAAAGGTTTATATACATTTGATGTAAA 1437
consensus_15349#1 ------------------------------------------------------------
consensus_15349#2 ------------------------------------------------------------
consensus_15349#0 AAAAAAAAAAAAAAAAAAAAAAAA 1461
consensus_15349#1 ------------------------
consensus_15349#2 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||