cluster # 15394

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Oryza sativa
cluster # 15394 cluster # 15394 Sequences # 21 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15394#0 length = 2212 sequences # 19

consensus_15394#1 length = 583 sequences # 1
consensus_15394#2 length = 495 sequences # 1

consensusID : consensus_15394#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 2212
fasta sequence

                              [CGGAAAGGCTCTCCCTTTCCGAGCTCTTCCCGAGCTCTCCTGCTTGTTCTTGGGGCCGGGGAAGATTCTTGCTGCTCTGAATCAGAGGTCAAGTAGTATATCATCTGTGAGTTAAGGAGGATGGCAGGAGTTGGCACTCAGCCGACGAGCCTCAGGAAGTATCTTGGAGCCCTCAAGGACACCACAACTGTGAGCTTGGCAAAAGTGAACAGTGATTATAAGGAATTGGATATTGCAATTGTGAAGGCTACAAACCATGTTGAGCGTCCATCAAAGGAGAAGTACATAAGAGAAATTTTTTATTCCATTTCTGCTTCAAGGCCACGAGCAGATGTAGCTTACTGCATCCATGCCCTTGCAAGACGTCTTTCCAAGACACGCAATTGGGCGGTTGCATTGAAGACATTAATTGTCATACATCGCGCCCTTCGAGAGGTCGATCCCACTTTTCGTGAAGAGCTTATCAATTATGGCAGATCTAGGTCCCATATGCTAAACTTGGCCTACTTTAAGGATGATTCTAGTGCAGGAGCTTGGGATTTTTCTGCTTGGATACGCACTTATGCTTTATATTTAGAAGAGAGACTTGAATGTTTCCGAGTGCTGAAGTATGATGTGGAGACAGATCCTCCGAAAACTCGGGATCTTGAAACTGGTGATTTGCTTGATCATCTGCCAGCATTACAGCAACTTCTTTTTCGGCTCCTTGCTTGCCAGCCACAAGGGGCATCATCTTACAATGTCATAATCCAGCACGCACTTTCAATGGTTGCTCTGGAAAGTGTTAAGATCTACACTGCTATTAGTGATGGTACAATTAATCTGGTTGACAAGTTCTTTGAGATGCAAAGAAGTGATGCTGTTAGGGCACTTGATATATACAAAAGAGCAACTAACCAGGCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAGAAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTGACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAGGCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAAGAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGATTTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC-GACCCGTTCTACGCCT-CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG-CCGCCGCCGCCGCGGCGCCCCCGC-CTCAGGTGTTCC-ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC-GTTCGGCAACCC-GTTC-GCCGCC-GCC-GCAGCC-GCCCACCACCC-TTACGGCGCC-GC-CGC-C-GCC-GCC-GGCAAC-GGCTACAC-GGGGCTCATATGATGATCATCATCCAGCTC-CGGCGATGTCGGTCGTCGTCGCACTAC-TTCCAATGTCGATTC-TTTTTTGGCTGGAAAAA-TTTGTAGC-TTTC-TC-TCATT-GTTGAT-GGTTTGTAGCACACACA-GGTAG-AAG-AAG-AAG-AAGAA-TTCGGT-GGT-GTTCGT-CCG-ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG-TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG--GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC-GATTACATAATAATCAAGATGTGTCAATTATTTGTAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100481             [CGGAAAGGCTCTCCCTTTCCGAGCTCTTCCCGAGCTCTCCTGCTTGTTCTTGGGGCCGGGGAAGATTCTTGCTGCTCTGAATCAGAGGTCAAGTAGTATATCATCTGTGAGTTAAGGAGGATGGCAGGAGTTGGCACTCAGCCGACGAGCCTCAGGAAGTATCTTGGAGCCCTCAAGGACACCACAACTGTGAGCTTGGCAAAAGTGAACAGTGATTATAAGGAATTGGATATTGCAATTGTGAAGGCTACAAACCATGTTGAGCGTCCATCAAAGGAGAAGTACATAAGAGAAATTTTTTATTCCATTTCTGCTTCAAGGCCACGAGCAGATGTAGCTTACTGCATCCATGCCCTTGCAAGACGTCTTTCCAAGACACGCAATTGGGCGGTTGCATTGAAGACATTAATTGTCATACATCGCGCCCTTCGAGAGGTCGATCCCACTTTTCGTGAAGAGCTTATCAATTATGGCAGATCTAGGTCCCATATGCTAAACTTGGCCTACTTTAAGGATGATTCTAGTGCAGGAGCTTGGGATTTTTCTGCTTGGATACGCACTTATGCTTTATATTTAGAAGAGAGACTTGAATGTTTCCGAGTGCTGAAGTATGATGTGGAGACAGATCCTCCGAAAACTCGGGATCTTGAAACTGGTGATTTGCTTGATCATCTGCCAGCATTACAGCAACTTCTTTTTCGGCTCCTTGCTTGCCAGCCACAAGGGGCATCATCTTACAATGTCATAATCCAGCACGCACTTTCAATGGTTGCTCTGGAAAGTGTTAAGATCTACACTGCTATTAGTGATGGTACAATTAATCTGGTTGACAAGTTCTTTGAGATGCAAAGAAGTGATGCTGTTAGGGCACTTGATATATACAAAAGAGCAACTAACCAGGCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAGAAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTGACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAGGCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAAGAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGATTTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGT                                                                            ]
[+] EMBL AK058599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTAATCTGGTTGACAAGTTCTTTGAGATGCAAAGAAGTGATGCTGTTAGGGCACTTGATATATACAAAAGAGCAACTAACCAGGCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAGAAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTGACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAGGCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAAGAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGATTTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCGGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAATAATCAAGATGTGTCAATTA                                           ]
[+] EMBL CB635404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACTAACCAGGCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAGAAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTGACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAGGCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAAGAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGATTTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB653012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATACCAGAAAGAGGCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAAGAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGATTTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU082547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTAGCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTCACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGNCGCCG ACGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCANCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB632224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAACTGCTATTACTTCAAGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTTTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACCCA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTGGGGGACATTGATCGAGTCC GA                                                                       ]
[-] EMBL CB632225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTGATGGACATTGATCGAGTAC G                                                                        ]
[-] EMBL CB635405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCAC GACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCAGG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATAGG TTATTCATGGACATTGATCG                                                                               ]
[+] EMBL CB670757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGATGCACTTACCCGTTCTACGCCT CCAGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGAT                                                                                                  ]
[+] EMBL AU082548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTTCTACGCTTNCTTGNGG TANGCGNCGCCGCANAACGTGCNGATGACCGCNATGGCGCAG NNNNGCAGGCCTTNATGNTCCAGCAGCAGATGATGATGGCCGNCGCCGNCNGCCGCCGCNTCGGCGCCCCCNC CTCAGGTGTTCC ACCACCACCAGCTNC NCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCCTTTACGGCGCC GC CGC C GCC NCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAATAATCAAGATGTGTCAATTAaaaa                                       ]
[+] EMBL AU197990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCG CCGCCGCCGCCGCGGCGCCCCCGC CTCAGGTGTTCC ACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCC GTTCGGCAACCC GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTN CGGCGATGTCGGTCGTCGTCGCACTACTTTCCAATGTCGATTCTTTTTTTGGCTGGAAAAATTTTGTAGCTTTTCTTCTTCATTGGTTGATGGGTTTGTAGCACACACAGGGTAGAAAGAAAGAAAGAAAGAATTTCGGTGGGTGGTTCGTCCCGAATTCGG                                                                                                                                                                                                                              ]
[+] EMBL BM418541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGCACTCAGGTGTTCCAACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAACCCAGTTCGGCAACCCAGTTCAGCCGCCAGCCAGCAGCCAGCCCACCACCC TTACGGCGCCAGCACGCACAGCCAGCCAGGCAACAGGCTACACAGGGGCTCATATGATGATCATCATCCAGCTCACGGCGATGTCGGTCGTCGTCGCACTAC TTCC ATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAAAAAaa                                                          ]
[+] EMBL AU197991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTC GCCGCC GCC GCAGCC GCCCACCACCC TTACGGCGCC GC CGC C GCC GCC GGCAAC GGCTACAC GGGGCTCATATGATGATCATCATCCAGCTC CGGCGATGTCGGTCGTCGTCGCACTAC TTCCAATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAATAATCAAGATGTGTCAATTATTTGTAGTGTAACAAAAAA                        ]
[+] EMBL BI811159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cATGTCGATTC TTTTTTGGCTGGAAAAA TTTGTAGC TTTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACCTTGATCGAGTAC GATTACATAATAAaaa                                                         ]
[+] EMBL BQ906445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTC TC TCATT GTTGAT GGTTTGTAGCACACACA GGTAN AAG AAG AAG AAGAACTTCGGT CCT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGAACTGATTACAGGATAAaaa                                                         ]
[-] EMBL OS38002              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACACACA GGTAG AAG AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATGCTATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTA                                                                                                            ]
[+] EMBL CA754309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAG AAG AAGAA TTCGGT GGT GTTCGT CCG ATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAATAATCAAGATGTGTCAATTATTTGTAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM414919             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTAATGTATGTACGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTGCAGGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGNCATTGATCGAGTAC GATTACATAAT                                                              ]
[-] EMBL AU165224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAATGTATGTAAGTATGCATG TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTG  GGTGGGTGATTCGGGATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTAC GATTACATAATAATCAAGATGTGTCAATTATTTGTAGTGGAAAAAA                           ]




>consensus_15394#0
CGGAAAGGCTCTCCCTTTCCGAGCTCTTCCCGAGCTCTCCTGCTTGTTCTTGGGGCCGGG
GAAGATTCTTGCTGCTCTGAATCAGAGGTCAAGTAGTATATCATCTGTGAGTTAAGGAGG
ATGGCAGGAGTTGGCACTCAGCCGACGAGCCTCAGGAAGTATCTTGGAGCCCTCAAGGAC
ACCACAACTGTGAGCTTGGCAAAAGTGAACAGTGATTATAAGGAATTGGATATTGCAATT
GTGAAGGCTACAAACCATGTTGAGCGTCCATCAAAGGAGAAGTACATAAGAGAAATTTTT
TATTCCATTTCTGCTTCAAGGCCACGAGCAGATGTAGCTTACTGCATCCATGCCCTTGCA
AGACGTCTTTCCAAGACACGCAATTGGGCGGTTGCATTGAAGACATTAATTGTCATACAT
CGCGCCCTTCGAGAGGTCGATCCCACTTTTCGTGAAGAGCTTATCAATTATGGCAGATCT
AGGTCCCATATGCTAAACTTGGCCTACTTTAAGGATGATTCTAGTGCAGGAGCTTGGGAT
TTTTCTGCTTGGATACGCACTTATGCTTTATATTTAGAAGAGAGACTTGAATGTTTCCGA
GTGCTGAAGTATGATGTGGAGACAGATCCTCCGAAAACTCGGGATCTTGAAACTGGTGAT
TTGCTTGATCATCTGCCAGCATTACAGCAACTTCTTTTTCGGCTCCTTGCTTGCCAGCCA
CAAGGGGCATCATCTTACAATGTCATAATCCAGCACGCACTTTCAATGGTTGCTCTGGAA
AGTGTTAAGATCTACACTGCTATTAGTGATGGTACAATTAATCTGGTTGACAAGTTCTTT
GAGATGCAAAGAAGTGATGCTGTTAGGGCACTTGATATATACAAAAGAGCAACTAACCAG
GCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAG
AAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTG
ACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAG
GCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAA
GAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGAT
TTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTA
GCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTC
ACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCA
AGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCG
AACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCC
GGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCACGACCCGTTCTACGCCTCC
AGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGCAGCAGCAGCAGGCC
TTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGCGGCGCCCCCG
CCTCAGGTGTTCCACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAAC
CCGTTCGGCAACCCGTTCGCCGCCGCCGCAGCCGCCCACCACCCTTACGGCGCCGCCGCC
GCCGCCGGCAACGGCTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATGTC
GGTCGTCGTCGCACTACTTCCAATGTCGATTCTTTTTTGGCTGGAAAAATTTGTAGCTTT
CTCTCATTGTTGATGGTTTGTAGCACACACAGGTAGAAGAAGAAGAAGAATTCGGTGGTG
TTCGTCCGATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATG
TATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGGGATAA
GATTAATTATTGGATTATTCATGGACATTGATCGAGTACGATTACATAATAATCAAGATG
TGTCAATTATTTGTAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15394#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence

                              [CGCGGCGCCGCACAACGTGCAGATGACCCCCATGGCGCAGCAGCAGCAGCCCTTCATGTTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGGGGCGCCCCCGCCTCAGGTGTTCCCCCCCCCCCAGCAGCAGCAGCAGCTTTTCCAGGCCAACCCGGGGAACCCGTTGGGCAACCCGTTTGCCGCCGCCGCAGCCGCCCACCACCCTTAGGGCGCCCCCCCCCCCCCCGGCAACGGTTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATGTCGGTCGTCGTCGCACTACTTCCAATGTCGATTTTTTTTTGGCTGGAAAAATTTGTAGCTTTCTCTCATTGTTGATGGTTTGTAGCCCCCCCAGGTAGAAGAAGAAGAAGAATTCGGTGGTGTTCGTCCGATTCGGACACGTCCCACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATGTATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGGGATAAGATTAATTATTGGATTATGGGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAC]

[-] EMBL CB670758             [CGCGGCGCCGCACAACGTGCAGATGACCCCCATGGCGCAGCAGCAGCAGCCCTTCATGTTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGGGGCGCCCCCGCCTCAGGTGTTCCCCCCCCCCCAGCAGCAGCAGCAGCTTTTCCAGGCCAACCCGGGGAACCCGTTGGGCAACCCGTTTGCCGCCGCCGCAGCCGCCCACCACCCTTAGGGCGCCCCCCCCCCCCCCGGCAACGGTTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATGTCGGTCGTCGTCGCACTACTTCCAATGTCGATTTTTTTTTGGCTGGAAAAATTTGTAGCTTTCTCTCATTGTTGATGGTTTGTAGCCCCCCCAGGTAGAAGAAGAAGAAGAATTCGGTGGTGTTCGTCCGATTCGGACACGTCCCACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATGTATGTATATGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGGGATAAGATTAATTATTGGATTATGGGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAC]




>consensus_15394#1
CGCGGCGCCGCACAACGTGCAGATGACCCCCATGGCGCAGCAGCAGCAGCCCTTCATGTT
CCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGGGGCGCCCCCGCCTCAGGT
GTTCCCCCCCCCCCAGCAGCAGCAGCAGCTTTTCCAGGCCAACCCGGGGAACCCGTTGGG
CAACCCGTTTGCCGCCGCCGCAGCCGCCCACCACCCTTAGGGCGCCCCCCCCCCCCCCGG
CAACGGTTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATGTCGGTCGTCG
TCGCACTACTTCCAATGTCGATTTTTTTTTGGCTGGAAAAATTTGTAGCTTTCTCTCATT
GTTGATGGTTTGTAGCCCCCCCAGGTAGAAGAAGAAGAAGAATTCGGTGGTGTTCGTCCG
ATTCGGACACGTCCCACGTAGGTGCTTGGGGTAATGTATGTACGTATGCATGTATGTATA
TGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGGGATAAGATTAATT
ATTGGATTATGGGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAC

consensusID : consensus_15394#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 495
fasta sequence

                              [TTTTTTCAGACAGATGAAGCAGCACTAGCATCATTCTTAATTTGAAATGCAGCAAAATTTTCAGACAGATGCAGCAACAACAAAAGCTAACCATCTCTGAAACTCTGAAATCTTTTCTTCAGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCACGACCCGTTCTACGCCTCCAGCGGTACGCGGGCCGCACAACGTGCAGATGACCGCATGGCGCAGAAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCGCCTGCTGCTGCCGCAGCCGGGTGCCCCGCCTCAGGTGTTCCACCACCACCAGCAGAGCAGCAGATCTCCAGAGCAAACCGGGAAACCGTCGGGAACCCGTTCGCGGCGCGGAGGACGC]

[-] EMBL BI800860             [TTTTTTCAGACAGATGAAGCAGCACTAGCATCATTCTTAATTTGAAATGCAGCAAAATTTTCAGACAGATGCAGCAACAACAAAAGCTAACCATCTCTGAAACTCTGAAATCTTTTCTTCAGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCACGACCCGTTCTACGCCTCCAGCGGTACGCGGGCCGCACAACGTGCAGATGACCGCATGGCGCAGAAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCGCCTGCTGCTGCCGCAGCCGGGTGCCCCGCCTCAGGTGTTCCACCACCACCAGCAGAGCAGCAGATCTCCAGAGCAAACCGGGAAACCGTCGGGAACCCGTTCGCGGCGCGGAGGACGC]




>consensus_15394#2
TTTTTTCAGACAGATGAAGCAGCACTAGCATCATTCTTAATTTGAAATGCAGCAAAATTT
TCAGACAGATGCAGCAACAACAAAAGCTAACCATCTCTGAAACTCTGAAATCTTTTCTTC
AGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCGAACCGGAGAG
CGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCCGGCGCCGGCG
CCGCCCCGATGATGCAGCAGCCGATGATGCACGACCCGTTCTACGCCTCCAGCGGTACGC
GGGCCGCACAACGTGCAGATGACCGCATGGCGCAGAAGCAGCAGGCCTTCATGCTCCAGC
AGCAGATGATGATGGCGCCTGCTGCTGCCGCAGCCGGGTGCCCCGCCTCAGGTGTTCCAC
CACCACCAGCAGAGCAGCAGATCTCCAGAGCAAACCGGGAAACCGTCGGGAACCCGTTCG
CGGCGCGGAGGACGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15394#0      CGGAAAGGCTCTCCCTTTCCGAGCTCTTCCCGAGCTCTCCTGCTTGTTCTTGGGGCCGGG 60
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GAAGATTCTTGCTGCTCTGAATCAGAGGTCAAGTAGTATATCATCTGTGAGTTAAGGAGG 120
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      ATGGCAGGAGTTGGCACTCAGCCGACGAGCCTCAGGAAGTATCTTGGAGCCCTCAAGGAC 180
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      ACCACAACTGTGAGCTTGGCAAAAGTGAACAGTGATTATAAGGAATTGGATATTGCAATT 240
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GTGAAGGCTACAAACCATGTTGAGCGTCCATCAAAGGAGAAGTACATAAGAGAAATTTTT 300
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      TATTCCATTTCTGCTTCAAGGCCACGAGCAGATGTAGCTTACTGCATCCATGCCCTTGCA 360
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGACGTCTTTCCAAGACACGCAATTGGGCGGTTGCATTGAAGACATTAATTGTCATACAT 420
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      CGCGCCCTTCGAGAGGTCGATCCCACTTTTCGTGAAGAGCTTATCAATTATGGCAGATCT 480
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGGTCCCATATGCTAAACTTGGCCTACTTTAAGGATGATTCTAGTGCAGGAGCTTGGGAT 540
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      TTTTCTGCTTGGATACGCACTTATGCTTTATATTTAGAAGAGAGACTTGAATGTTTCCGA 600
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GTGCTGAAGTATGATGTGGAGACAGATCCTCCGAAAACTCGGGATCTTGAAACTGGTGAT 660
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      TTGCTTGATCATCTGCCAGCATTACAGCAACTTCTTTTTCGGCTCCTTGCTTGCCAGCCA 720
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      CAAGGGGCATCATCTTACAATGTCATAATCCAGCACGCACTTTCAATGGTTGCTCTGGAA 780
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGTGTTAAGATCTACACTGCTATTAGTGATGGTACAATTAATCTGGTTGACAAGTTCTTT 840
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GAGATGCAAAGAAGTGATGCTGTTAGGGCACTTGATATATACAAAAGAGCAACTAACCAG 900
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GCTGAAAGACTATCAGAGTTTTATGAAGTGTGTAAAACGATACACATTGGGCGTGGTGAG 960
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AAGTTCTTAAAAATCGAACAGCCTCCAGCTTCATTCTTAGTAACCATGGAGGAATATGTG 1020
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      ACAGAAGCTCCCACTGTAGCTCAAAAAGATAAGGTACTGGCAATCGAATACAAGAAAGAG 1080
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GCAGAGGAGGAAGAAAAGCCGGCATCGCCTCCTCCCGCTCCAGAGCCAGAACCAGAACAA 1140
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GAACCAGAGCCAGAGCCTGAACCAGTAAAAGAGGAAGCACCTAAAGAGGAGCCAACAGAT 1200
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      TTGCTGGGTCTGAACGAACCGAACCCTGCCGCAGCCGAGATAGAGGAGAAGAATGCTTTA 1260
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GCCCTTGCCATTGTTCCGATAGATGATGTACCTAAAGTTGCACCTGCTCAAAATGGAGTC 1320
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      ACTGGCTGGGAGCTGGCCCTTGTCACCACACCCAGCTCAAACGAAACTGCTATTACTTCA 1380
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGCAAGAAGCTGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGTACGACGACGCG 1440
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACCCCGGCGTCGCC 1500
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      GGCGCCGGCGCCGCCCCGATGATGCAGCAGCCGATGATGCACGACCCGTTCTACGCCTCC 1560
consensus_15394#1      ------------------------------------------------------------
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGCGGCTACGCGGCGCCGCACAACGTGCAGATGACCGCCATGGCGC-AGCAGCAGCAGGC 1619
consensus_15394#1      --------CGCGGCGCCGCACAACGTGCAGATGACCCCCATGGCGC-AGCAGCAGCAGCC 51
consensus_15394#2      ---------------------TTTTTTCAGACAGATGAAGCAGCACTAGCATCATTCTTA 39
                                                * ****           ** * **** **      

consensus_15394#0      CTTCATGCTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGCGGCGCCCCC 1679
consensus_15394#1      CTTCATGTTCCAGCAGCAGATGATGATGGCCGCCGCCGCCGCCGCCGCCGGGGCGCCCCC 111
consensus_15394#2      ATTTGAAATGCAGCAAAATTTTCAGACAGATGCAGCAACAACAAAAGCTAACCATCTCTG 99
                        **     * *****  *  *   **  *  ** **  *  *    **       * *  

consensus_15394#0      GCCTCAGGTGTTCCACCACCACCAGCAGCAGCAGCAGCATCTCCAGGCCAACCCGGCGAA 1739
consensus_15394#1      GCCTCAGGTGTTCCCCCCCCCCCAGCAGCAGCAGCAGCTTTTCCAGGCCAACCCGGGGAA 171
consensus_15394#2      AAACTCTGAAATCTTTTCTTCAGGCTGGTGGACTGGACTTGCTCACGCTCGACAGCCTGT 159
                              *   **              *  *      * *   ** **    * *     

consensus_15394#0      CCCGTTCGGCAACCCGTTCGCCGCCGCCGCAGCCGC-CCACCACCCTTACGGCGCCGCCG 1798
consensus_15394#1      CCCGTTGGGCAACCCGTTTGCCGCCGCCGCAGCCGC-CCACCACCCTTAGGGCGCCCCCC 230
consensus_15394#2      ACGACGACGCGAACCGGAGAGCGAGCCAGCCGACGAGCTACAACCCATGGGATGTCAACC 219
                        *      ** * ***     **   * ** * **  * ** **** *  *  * *  * 

consensus_15394#0      CCGCCGCCGGCAACGGCTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATG 1858
consensus_15394#1      CCCCCCCCGGCAACGGTTACACGGGGCTCATATGATGATCATCATCCAGCTCCGGCGATG 290
consensus_15394#2      CCGGCGTCGCCGGCGCCGGCGCCG--CCCCGATGATG--CAGCA------GCCGATGATG 269
                       **  *  ** *  **    * * *  * *  ******  ** **       ***  ****

consensus_15394#0      TCGGTCGTCGTCGCACTACTTCCAATGTCGATTCTTTTTTGGCTGGAAAAATTTGTAGCT 1918
consensus_15394#1      TCGGTCGTCGTCGCACTACTTCCAATGTCGATTTTTTTTTGGCTGGAAAAATTTGTAGCT 350
consensus_15394#2      CACGAC-CCGTTCTAC-GCCTCCAGCGGTA-------CGCGGGCCGCACAACGTGCAGAT 320
                          * *  ***   **  * ****  *             **   * * **  ** ** *

consensus_15394#0      TTCTCTCATTGTTGATGGTTTGTAGCACACACAGGT--AGAAGAAGAAGAAGAATTCGGT 1976
consensus_15394#1      TTCTCTCATTGTTGATGGTTTGTAGCCCCCCCAGGT--AGAAGAAGAAGAAGAATTCGGT 408
consensus_15394#2      GAC-CGCATGGCGCAGAAGCAGCAGGCCTTCATGCTCCAGCAGCAGATGATGATGGCGCC 379
                         * * *** *   *      * **  *     * *  ** ** *** ** **   **  

consensus_15394#0      GGTGTTCGTCCGATTCGGACACGTCACACGTAGGTGCTTGGGGTAATGTATGTACGTATG 2036
consensus_15394#1      GGTGTTCGTCCGATTCGGACACGTCCCACGTAGGTGCTTGGGGTAATGTATGTACGTATG 468
consensus_15394#2      TGCTGCTGCCGCAGCCGGGTGCCCCGC-CTCAGGTGTTCCAC-CACCACCAGCAGAGCAG 437
                        *     * *  *  ***   *  * * *  ***** *      *      * *     *

consensus_15394#0      CATGTATGTATA-TGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGG 2095
consensus_15394#1      CATGTATGTATA-TGGGTATGGGTATTTTTGGTATTTCTTCATGTGGGTGGGTGATTCGG 527
consensus_15394#2      CAGATCTCCAGAGCAAACCGGGAAACCGTCGGGAACCCGTTCGCGGCGCGGAGGACGC-- 495
                       **  * *  * *        **  *   * ** *   * *     * * **  **  *  

consensus_15394#0      GATAAGATTAATTATTGGATTATTCATGGACATTGATCGAGTACGATTACATAATAATCA 2155
consensus_15394#1      GATAAGATTAATTATTGGATTATGGGTGGCCAAAAA--AAAAAAAAAAAAAAAAAAAC-- 583
consensus_15394#2      ------------------------------------------------------------
                                                                                   

consensus_15394#0      AGATGTGTCAATTATTTGTAGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2212
consensus_15394#1      ---------------------------------------------------------
consensus_15394#2      ---------------------------------------------------------