cluster # 15446

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Oryza sativa
cluster # 15446 cluster # 15446 Sequences # 22 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15446#0 length = 1160 sequences # 18

consensus_15446#1 length = 223 sequences # 1
consensus_15446#2 length = 170 sequences # 3

consensusID : consensus_15446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1160
fasta sequence

                              [TTTTTTTAAAAAAGGGGATTTTCCCCCCCTTTGCCCCTTGGGCCAATTTGGGCCAGGGGCCCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT-TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCATCCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAACCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTATGAATTCCAAGTATTGAAGGCTTCACTTCCTGGCACTGTGTTGCAGGTTGAGAACGGTTAACCACATCAACAGTGTTGGAAAATGCTATAGTGGTCTGTTTGGGAAAAGGCCTCTCCTGCGTCTGTATCAGTTGTTGCGGCTGCTGCACCATCTGTGGCTGCTGCACCATCTGTGGCTGCTGCATCTGTAGTGGCTGAGTTTGAGCAGTCAGCAGATCCTGTCTCACCGCTACTCCATTTCCTGACAAATCTTGAGGTTGG]

[-] EMBL CF303713             [TTTTTTTAAAAAAGGGGATTTTCCCCCCCTTTGCCCCTTGGGCCAATTTGGGCCAGGGGCCCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF304198             [                                                                             TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF304234             [                                                                                   TTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATAAGAAATATAAATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAAAGTCACATTGCAGGGTGACTCTAGGTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF303611             [                                                                                              TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT    T   AAAT TGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF309487             [                                                                                                    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAAAAATATGGATGATCTCTTTCTTTTATTCAAATAATTAGTAATTACACATATCACACAACTTTGATGCCCACATTATAGGGATTAACATGTCACTATGGGGGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAAAAAATGGACAAGTCTAGGGTCACATTGCAGGGGGACTTTAGCTAAAGCGGGCGCTCTAGCCCTTACAATCACCCACAAAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGGTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAAACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CF309486             [                                                                                                      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATATCACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF311434             [                                                                                                                              TTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF308337             [                                                                                                                               TTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTACAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCG                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF309363             [                                                                                                                                    tttttTAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF309362             [                                                                                                                                     ttttTAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCTTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTTNTGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTT TTTCTTCTGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF309723             [                                                                                                                                                         ttttTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCT   TTTCTActc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF309722             [                                                                                                                                                        tttttTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAGGGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACAGAACCTGCCTAAACTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF304885             [                                                                                                                                                                                                                                                                                                                                                           ACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF304807             [                                                                                                                                                                                                                                                                                                                                                           ACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCATCCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAACCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTATGAATTCCAAGTATTGAAGGCTTCACTTCCTGGCACTGTGTTGCAGGTTGAGAACGGTTAACCACATCAACAGTGTTGGAAAATGCTATAGT                                                                                                                                                                         ]
[+] EMBL CF305098             [                                                                                                                                                                                                                                                                                                                                                           ACAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF303661             [                                                                                                                                                                                                                                                                                                                                                            CAATCACCCACAGAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCATAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCATCCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAACCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTG                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF304173             [                                                                                                                                                                                                                                                                                                                                                                            CTGCCTATACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTCGGCGCTT TGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCCTTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCATAGGCTCCAGAAGCTGATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTTTGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCATCCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAACCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTATG                                                                                                                                                                                                                                                                   ]
[-] EMBL CF311433             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATCTTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCAGAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCATCCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAACCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTATGAATTCCAAGTATTGAAGGCTTCACTTCCTGGCACTGTGTTGCAGGTTGAGAACGGTTAACCACATCAACAGTGTTGGAAAATGCTATAGTGGTCTGTTTGGGAAAAGGCCTCTCCTGCGTCTGTATCAGTTGTTGCGGCTGCTGCACCATCTGTGGCTGCTGCACCATCTGTGGCTGCTGCATCTGTAGTGGCTGAGTTTGAGCAGTCAGCAGATCCTGTCTCACCGCTACTCCATTTCCTGACAAATCTTGAGGTTGG]




>consensus_15446#0
TTTTTTTAAAAAAGGGGATTTTCCCCCCCTTTGCCCCTTGGGCCAATTTGGGCCAGGGGC
CCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGT
AATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTG
TGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAG
GGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACA
GAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTC
GGCGCTTTGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCC
TTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCT
GATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTT
TGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATC
TTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCA
GAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCAT
CCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAA
CCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTAT
GAATTCCAAGTATTGAAGGCTTCACTTCCTGGCACTGTGTTGCAGGTTGAGAACGGTTAA
CCACATCAACAGTGTTGGAAAATGCTATAGTGGTCTGTTTGGGAAAAGGCCTCTCCTGCG
TCTGTATCAGTTGTTGCGGCTGCTGCACCATCTGTGGCTGCTGCACCATCTGTGGCTGCT
GCATCTGTAGTGGCTGAGTTTGAGCAGTCAGCAGATCCTGTCTCACCGCTACTCCATTTC
CTGACAAATCTTGAGGTTGG

consensusID : consensus_15446#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 223
fasta sequence

                              [AATATTTATATGTATATGGAATTGGTTAATAAAATGCATCTGGTTCATCAAAGAATTATAAAGACACGTGACATTCATTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCC]

[-] EMBL OSA309294            [AATATTTATATGTATATGGAATTGGTTAATAAAATGCATCTGGTTCATCAAAGAATTATAAAGACACGTGACATTCATTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCC]




>consensus_15446#1
AATATTTATATGTATATGGAATTGGTTAATAAAATGCATCTGGTTCATCAAAGAATTATA
AAGACACGTGACATTCATTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGAT
AATTAGTAATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCA
CTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCC

consensusID : consensus_15446#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 170
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCA]

[-] EMBL CF303428             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCA]
[-] EMBL CF303656             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCA]
[-] EMBL CF303205             [                                             TTTTTTTTTTAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCA]




>consensus_15446#2
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAC
ACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTGTGCATCCTTTTATTT
CATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAGGGTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15446#0      TTTTTTTAAAAAAGGGGATTTTCCCCCCCTTTGCCCCTTGGGCCAATTTGGGCCAGGGGC 60
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      -----------------------------------------------------AATATTT 7
                                                                                   

consensus_15446#0      CCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 120
consensus_15446#2      ----------------------------------TTTTTTTTTTTTTTTTTTTTTTTTTT 26
consensus_15446#1      ATATGTATATGGAATTGGTTAATAAAATGCATCTGGTTCATCAAAGAATTATAAAGACAC 67
                                                           **  *       ** *        

consensus_15446#0      TTTTTTTTTTTTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGT 180
consensus_15446#2      TTTTTTTTTTTTT--------------------TTTTTTTTTTTTTTT------------ 54
consensus_15446#1      GTGACATTCATTTAGGATAAGAAATATGGATGATCTCTTTCTCTTATTCAGATAATTAGT 127
                        *    **  ***                    * * *** * ** **            

consensus_15446#0      AATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTG 240
consensus_15446#2      ---------TAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTG 105
consensus_15446#1      AATTACACATAACACACAACTTTGATGCCCACATTATAGTGATTAGCATGTCACTATGTG 187
                                ***************************************************

consensus_15446#0      TGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTCTAG 300
consensus_15446#2      TGCATCCTTTTATTTCATACATTAATTAAGTTGGCCAATCCAGAAGATGGACAAGTATAG 165
consensus_15446#1      TGCATCCTTTTATTTCATACATTAATTAAGTTGGCC------------------------ 223
                       ************************************                        

consensus_15446#0      GGTCACATTGCAGGGTGACTCTAGCTAGAGCGGCCGCTCTAGCCCTTACAATCACCCACA 360
consensus_15446#2      GGTCA------------------------------------------------------- 170
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GAACCTGCCTAAACTACGTACAAAGCTAGCTTTCTATCTTCTGAGTTGTTCTATAACTTC 420
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GGCGCTTTGTTGGGTTCCTTAGACGCCATTATAAGCTCTACCAGGGACCCGTCAATGTCC 480
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      TTCGCAAGCATTGCCTTTTGCATCCCATTCCCCATGGCTGGCGCAGAGGCTCCAGAAGCT 540
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GATTTTTCTGCTTTTCCATGATTTCAACTTGTTTCTTCTGCAACTCTTCATTCAATTCTT 600
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      TGAGTTGCGCAATTTCTGCTTCCAGTTCCATCGTATAAGCTTGCTTGCGAGCGCGGGATC 660
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      TTGCAGCTGATTCCCTATTCTTTATCATCCTTTTTTGCCTTCTCTCAATCACTTTCTCCA 720
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GAACTGCACCTGTTTTTCTCACTCGCCCAAACATGTAAGGAACAGGGGACAAAGATGCAT 780
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      CCAGGGCGCTCTTTGGAGTCAGATCAGGTGACATCTGGCTTCCAGGAGATACTGCTGCAA 840
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      CCGTTACTCCTGTTTTAAAATCGACAGCTTGCAGTAGATTGTTGTTCATAGGATGGTTAT 900
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GAATTCCAAGTATTGAAGGCTTCACTTCCTGGCACTGTGTTGCAGGTTGAGAACGGTTAA 960
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      CCACATCAACAGTGTTGGAAAATGCTATAGTGGTCTGTTTGGGAAAAGGCCTCTCCTGCG 1020
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      TCTGTATCAGTTGTTGCGGCTGCTGCACCATCTGTGGCTGCTGCACCATCTGTGGCTGCT 1080
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      GCATCTGTAGTGGCTGAGTTTGAGCAGTCAGCAGATCCTGTCTCACCGCTACTCCATTTC 1140
consensus_15446#2      ------------------------------------------------------------
consensus_15446#1      ------------------------------------------------------------
                                                                                   

consensus_15446#0      CTGACAAATCTTGAGGTTGG 1160
consensus_15446#2      --------------------
consensus_15446#1      --------------------