cluster # 15674

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Oryza sativa
cluster # 15674 cluster # 15674 Sequences # 24 consensus # 8

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15674#0 length = 671 sequences # 1
consensus_15674#1 length = 551 sequences # 9
consensus_15674#2 length = 519 sequences # 4
consensus_15674#3 length = 495 sequences # 5

consensus_15674#4 length = 391 sequences # 1
consensus_15674#5 length = 321 sequences # 2
consensus_15674#6 length = 231 sequences # 1
consensus_15674#7 length = 147 sequences # 1

consensusID : consensus_15674#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [TTTTTTTTTTTTTTACACAANGTGGGGTGTTCATCGTCTTCGGCTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCATGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACTATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACGGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGGTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTGCTACTTTGATCATTGGCTCTACAGCCACCCCATGCTGCGCGCAAATCTGCTTGGCCTTGGCGAGAAGCGCCTGCGAGAGCTGCTGCTGAACTCGCTCTCGGCCACCGGTACCATTGTCTTGTGCCGTTCCGGCGCGTGCCCGATGGCATCCTAAAGAGGCCGCGGGAACTCCAACCTCGGCCGTCGCAGCCGACTGCACGCCCCAGTCACGAGCCGCGCGCTGTGCCCGATCGCCCC]

[+] EMBL CA759785             [TTTTTTTTTTTTTTACACAANGTGGGGTGTTCATCGTCTTCGGCTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCATGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACTATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACGGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGGTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTGCTACTTTGATCATTGGCTCTACAGCCACCCCATGCTGCGCGCAAATCTGCTTGGCCTTGGCGAGAAGCGCCTGCGAGAGCTGCTGCTGAACTCGCTCTCGGCCACCGGTACCATTGTCTTGTGCCGTTCCGGCGCGTGCCCGATGGCATCCTAAAGAGGCCGCGGGAACTCCAACCTCGGCCGTCGCAGCCGACTGCACGCCCCAGTCACGAGCCGCGCGCTGTGCCCGATCGCCCC]




>consensus_15674#0
TTTTTTTTTTTTTTACACAANGTGGGGTGTTCATCGTCTTCGGCTCTGCAACAGATGCCA
GCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATA
TTTATTTGCATGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCA
TCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACTATACACAAAGATT
TTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTT
CGAATGATGCATACGGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACG
GGTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCAT
CTCCTTAGGATCTGCTACTTTGATCATTGGCTCTACAGCCACCCCATGCTGCGCGCAAAT
CTGCTTGGCCTTGGCGAGAAGCGCCTGCGAGAGCTGCTGCTGAACTCGCTCTCGGCCACC
GGTACCATTGTCTTGTGCCGTTCCGGCGCGTGCCCGATGGCATCCTAAAGAGGCCGCGGG
AACTCCAACCTCGGCCGTCGCAGCCGACTGCACGCCCCAGTCACGAGCCGCGCGCTGTGC
CCGATCGCCCC

consensusID : consensus_15674#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 551
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTGAATAAGTAACAAAACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG-CACTTCGAATGATGCATACAGTAATTG-CTGACACTTCCAAGAAACAACCTT-TGTACAGG-TCCA-CGGCTGTGACTCCCAACGATC-AGT-AAATC-AACCTTTGATTCCTCAGCTG-CTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACCCCATGCTGCGCGCAGATCTG-TTGGCTTGGTCGAGGAGCGC]

[-] EMBL CF314626             [TTTTTTTTTTTTTTTTTTTTTTTTTTGAATAAGTAACAAAACATACAC CATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGA                                                                                                                                                                                                                                                                 ]
[-] EMBL AU183708             [   TTTTTTTTTTTTTTTTTTTTTGGGAATAAGTAACAAAACATACACACATNTCACATATNTACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATNTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAANAAACAACCTT TGTACAGG TCCA CGGCTGTGACTCCCAACGATC A                                                                                                                               ]
[-] EMBL AU101313             [                   TTTTTTT   TAAGTAACAAAACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTT TGTACAGG TCCA CGGCTGTGACTCCCAACGATC AGT AAATC AACCTTTGATTCCTCAGCTG CTTGACAT                                                                                         ]
[-] EMBL BI796599             [                         ttttTAAGTAACAAAACATACACACATATCACATATATACACAAG TGGGTG TCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGC TTGTTTATTGCA TGTTGAGGATAACACATCGACAATACACAAAGATTTTCA TGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTTGTGTACAGG TCCACCGGCTGTGACTCCCAA GATC AGT AAATC AA CTTTGATTCCTCAGCTG CTTGACATATCATCTCCTTAGGATCTCCTAC TTGATCATGGTCTCTACAG CA CCCATGCTGCGCGCAGATCTG TTGGCTTGGTCGAGGAGCGC]
[-] EMBL AU108455             [                            tTAAGTAACAAAACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGNCACTTCGAATGATGCATACAGTAATTGCCTGACACTTCCAAGAAACAACCTT TGTACAGGTTCCA CGGCTGTGACTCCAAACGATCAAGTAAAATCAAACCTTTGATTCCTCAGCTGCCTTGACAT                                                                                         ]
[-] EMBL AK070914             [                                    CAAAACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTT TGTACAGG TCCA CGGCTGTGACTCCCAACGATC AGT AAATC AACCTTTGATTCCTCAGCTG CTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACCCCATGCTGCGCGCAGATCTGCTTGGCCTTGTCGAGGAGCGC]
[+] EMBL CK085075             [                                      AAACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTT TGTACAGG TCCA CGGCTGTGACTCCCAACGATC AGT AAATC AACCTTTGATTCCTCAGCTG CTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACCCCATGCTGCGCGCA                           ]
[-] EMBL CB677831             [                                        ACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTT TGTACAGG TCCA CGGCTGTGACTCCCAACGATC AGT AAATC AACCTTTGATTCGTCAG                                                                                                     ]
[-] EMBL CB677798             [                                        ACATACACACATATCACATATATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATGATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGG CACTTCGAATGATGCATACAGTAATTG CTGACACTTCCAAGAAACAACCTT TGTACAGG TCCA CGTCTat                                                                                                                                               ]




>consensus_15674#1
TTTTTTTTTTTTTTTTTTTTTTTTTTGAATAAGTAACAAAACATACACACATATCACATA
TATACACAAGTTGGGTGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGATG
ATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAAGCGGATATTTATTTGCAAG
ATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCT
TTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATT
CGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCAT
ACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCC
AACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATC
TCCTACTTTGATCATTGTCTCTACAGCCACCCCATGCTGCGCGCAGATCTGTTGGCTTGG
TCGAGGAGCGC

consensusID : consensus_15674#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 519
fasta sequence

                              [TTTTTTTTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAC-AGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCT-TTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAANAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGNCTCTACAGCCACCCCATGCTGCGCGCAGATCTGCTTGGCCTTGTCGAGGAGCGCCTGCNAGAGCTGCTGCTG]

[-] EMBL CF313780             [TTTTTTTTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAAGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCT NTATTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATT AGAT                                                                                                                                                                                                                                                                               ]
[-] EMBL AU181815             [                                                                                  TTTTTTTTTTTTTTTAC AGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCT TTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAANAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGNCTCTACAGCCACCCCATGCTGCGCGCAGATCTGCTTGGCCTTGTCGAGGAGCGCCTGCNAGAGCTGCTGCTG]
[-] EMBL AU161063             [                                                                                  TTTTTTTTTTTTTTTAC AGCAACAAGAAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCT TTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGNTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGGCTCTACAGCCACCCCATGCTGCGCGCAGATCTGCTTGGCCTTGTCGAGGAGCGC                  ]
[-] EMBL CF309070             [                                                                                                             AAGCGGATATTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTATTGTTTATTGCAGTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGG                                                                                                                                                                                                                                    ]




>consensus_15674#2
TTTTTTTTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATAAAT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGCAACAAGAAGCGGATATTT
ATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCT
AATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTT
ATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGA
ATGATGCATACAGTAATTGCTGACACTTCCAANAAACAACCTTTGTACAGGTCCACGGCT
GTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTC
CTTAGGATCTCCTACTTTGATCATTGNCTCTACAGCCACCCCATGCTGCGCGCAGATCTG
CTTGGCCTTGTCGAGGAGCGCCTGCNAGAGCTGCTGCTG

consensusID : consensus_15674#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 495
fasta sequence

                              [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATCTACTAACCCTGCTCTAGACCACATGGACTGGGTTTATATTTTACAATCGACACATCATATCAGGGAGGGTAGAAT]

[+] EMBL CF304376             [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATCTACTAACCCTGCTCTAGACCACATGGACTGGGTTTATATTTTACAATCGACACATCATATCAGGGAGGGTAGAAT]
[+] EMBL CF304133             [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATCTACTAACCCTGCTCTAGACCACATGGACTGGGTTTATATTTTACAATCGAC                        ]
[+] EMBL CF304158             [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATCTACTAACCCTGCTCTAGACCACATGGACTGGGTTTATATTTTACAATCGA                         ]
[+] EMBL CF305125             [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATCTACTAACCCTGCTCTAAACCACATGGACTGGGTTTATATT                                   ]
[+] EMBL CF304835             [GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTGTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATCAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCAACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCAATTAGGTAAC                                                                                                                                                                                         ]




>consensus_15674#3
GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTTG
TTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTATC
AAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTCGCTGCTCA
ACTACTCAGCACATTGTTGTTAGTTGTTACTAGTTCAAGATATTCAGCATTTTTTGTTGT
TTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTGCAACTGCA
ATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAGCTTGTAGC
TTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCTTATACATTTGACTACATTTGTATC
TACTAACCCTGCTCTAGACCACATGGACTGGGTTTATATTTTACAATCGACACATCATAT
CAGGGAGGGTAGAAT

consensusID : consensus_15674#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 391
fasta sequence

                              [TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGATATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCATCTTGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCCTTCCAAAAAAAAGGGGAAATTTTTTAAAACCCGAAAAAAAAACCCCTTTAAAGGGGGGAAAATTTAAACTGGGGAAAAAAAGGGCAAAAACTTTTCCCCGGGAAAAAATGGTAACCCCCAAAAATTCCAAAAAAAAAAAAACCCGAAAACAAAAAGGGAAAACCCC]

[+] EMBL CF312819             [TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGATATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCATCTTGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCCTTCCAAAAAAAAGGGGAAATTTTTTAAAACCCGAAAAAAAAACCCCTTTAAAGGGGGGAAAATTTAAACTGGGGAAAAAAAGGGCAAAAACTTTTCCCCGGGAAAAAATGGTAACCCCCAAAAATTCCAAAAAAAAAAAAACCCGAAAACAAAAAGGGAAAACCCC]




>consensus_15674#4
TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGAT
ATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCATCTTGAAAGAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTTTTTTCCCCTTCCAAAAAAAAGGG
GAAATTTTTTAAAACCCGAAAAAAAAACCCCTTTAAAGGGGGGAAAATTTAAACTGGGGA
AAAAAAGGGCAAAAACTTTTCCCCGGGAAAAAATGGTAACCCCCAAAAATTCCAAAAAAA
AAAAAACCCGAAAACAAAAAGGGAAAACCCC

consensusID : consensus_15674#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 321
fasta sequence

                              [TTTTTTTGTTTTGGTTTTTTTTTTTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACTTTAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACC]

[+] EMBL CF322259             [TTTTTTTGTTTTGGTTTTTTTTTTTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACTTTAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCAC ]
[-] EMBL CF322260             [ TTTTTTGTTTTGTTTTTTTTTTTTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCGAATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACC]




>consensus_15674#5
TTTTTTTGTTTTGGTTTTTTTTTTTTATCTGAATATCATCTAATACGGCTTTGTTTATTG
CATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGAAAGCTT
ATTTACTCCTGCTTCTTCACAACTTTAACTGGGCACTTCGAATGATGCATACAGTAATTG
CTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGCTGTGACTCCCAACGATCAGT
AAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCTCCTTAGGATCTCCTACTTTG
ATCATTGTCTCTACAGCCACC

consensusID : consensus_15674#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 231
fasta sequence

                              [TTTTTTTGTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGA]

[-] EMBL CF313602             [TTTTTTTGTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTGCAAGATAATCTTGACTATTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCATTGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGA]




>consensus_15674#6
TTTTTTTGTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTGCAAGATAATCTTGACTA
TTTACACAATACATTATTCAGTTATCTGAATATCATCTAATACGGCTTTGTTTATTGCAT
TGTTGAGGATAACACATCGACAATACACAAAGATTTTTATTGAGATTCGGA

consensusID : consensus_15674#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 147
fasta sequence

                              [TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGATATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGCCATGCCGTTA]

[+] EMBL CF316319             [TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGATATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGCCATGCCGTTA]




>consensus_15674#7
TAGCTGGCATCTGTTGCAGAACCGAAGACGATGAACACCCAACTTGTGTATATATGTGAT
ATGTGTGTATGTTTTGTTACTTATTCACAATGTGTCTCGTTCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAACACTGCCATGCCGTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15674#2      ----------------------------------------------------TTTTTTTT 8
consensus_15674#6      ---------------------------------------------------TTTTTTTGT 9
consensus_15674#1      TTTTTTTTTTTTTTTTTTTTTTTTTTGAATAAGTAACAAAACATACACACATATCACATA 60
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      -------------------------------------------------TTTTTTTTTTT 11
consensus_15674#4      ------------------------------------------------------------
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      ------------------------------------------------------------
                                                                                   

consensus_15674#2      TTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAATAAATTTTTTTTT 68
consensus_15674#6      TTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTTTTT 64
consensus_15674#1      TATACACAAGTTGGG-TGTTCATCGTCTTCGGTTCTGCAACAGATGCCAGCTACATGGAT 119
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      TTTACACAANGTGGGGTGTTCATCGTCTTCGGCTCTGCAACAGATGCCAGCTACATGGAT 71
consensus_15674#4      ------------------------------------------------------------
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      -GCGCTCCTCGACAAGGCCAAGCAGATCTGCGCGCAGCATGGGGTATGTATTATGTGCTT 59
                                                                                   

consensus_15674#2      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGCAACAAGAA-GCGGATATTTATTTGCA 127
consensus_15674#6      TTTTTTTTTTTTTTTTTTTTTTTTTTTTT-------------------TTTTTATTTGCA 105
consensus_15674#1      GATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAA-GCGGATATTTATTTGCA 178
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      GATACTCCTAAAGGAAACGCCCTTACTTTACAGCAACAAGAA-GCGGATATTTATTTGCA 130
consensus_15674#4      -------------------------------------TAGCT-GGCATCTGTTGCAGAAC 22
consensus_15674#7      -------------------------------------TAGCT-GGCATCTGTTGCAGAAC 22
consensus_15674#3      GTTTCCGCACCTACTATGACCATAATTTCTCCTCATTAAACTTGTGAGAAGTTGAATTAT 119
                                                                                   

consensus_15674#2      AGATAATCTTGACTATTTACACAATACATTA-TTCAGTTATCTGAATATCATCTAATACG 186
consensus_15674#6      AGATAATCTTGACTATTTACACAATACATTA-TTCAGTTATCTGAATATCATCTAATACG 164
consensus_15674#1      AGATAATCTTGACTATTTACACAATACATTA-TTCAGTTATCTGAATATCATCTAATACG 237
consensus_15674#5      ------------TTTTTTTGTTTTGGTTTTT-TTTTTTTATCTGAATATCATCTAATACG 47
consensus_15674#0      TGATAATCTTGACTATTTACACAATACATTA-TTCAGTTATCTGAATATCATCTAATACG 189
consensus_15674#4      CGAAGACGATGAACACCCAACTTGTGTATAT-ATGTGATATGTGTGTATGTTTTGTTACT 81
consensus_15674#7      CGAAGACGATGAACACCCAACTTGTGTATAT-ATGTGATATGTGTGTATGTTTTGTTACT 81
consensus_15674#3      CAAGCAGGATGTGCAGTACATCAGTATGAATGACCTCTTGTGTTTGTTTGGTC-GCTGCT 178
                                                             * * *   * *  *    * * 

consensus_15674#2      GCTTTGTTTATTGCATTGTTGA-------GGATAACACATCGACAATACACAAAGATTTT 239
consensus_15674#6      GCTTTGTTTATTGCATTGTTGA-------GGATAACACATCGACAATACACAAAGATTTT 217
consensus_15674#1      GCTTTGTTTATTGCATTGTTGA-------GGATAACACATCGACAATACACAAAGATTTT 290
consensus_15674#5      GCTTTGTTTATTGCATTGTTGA-------GGATAACACATCGACAATACACAAAGATTTT 100
consensus_15674#0      GCTTTGTTTATTGCATTGTTGA-------GGATAACACATCGACTATACACAAAGATTTT 242
consensus_15674#4      TATTCACAATGTGTCTCGTTCATCTTGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 141
consensus_15674#7      TATTCACAATGTGTCTCGTTCA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAACACTG 136
consensus_15674#3      CAACTACTCAGCACATTGTTGTT------AGTTGTTACTAGTTCAAGATATTCAGCATTT 232
                                      * ***                *        * * *   *      

consensus_15674#2      TATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCG 299
consensus_15674#6      TATTGAGATTCGGA---------------------------------------------- 231
consensus_15674#1      TATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCG 350
consensus_15674#5      TATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACTTTAACTGGGCACTTCG 160
consensus_15674#0      TATTGAGATTCGGAAAGCTTATTTACTCCTGCTTCTTCACAACAAGAACTGGGCACTTCG 302
consensus_15674#4      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 201
consensus_15674#7      CCATGCCGTTA------------------------------------------------- 147
consensus_15674#3      TTTGTTGTTTGGCCATATCAGTAAGGGAAAATGCCATAGGTGTCCAATTTCATGTGTTTG 292
                                                                                   

consensus_15674#2      AATGATGCATACAGTAATTGCTGACACTTCCAANAAACAACCTTTGTACAGGTCCACGGC 359
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      AATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGC 410
consensus_15674#5      AATGATGCATACAGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGC 220
consensus_15674#0      AATGATGCATACGGTAATTGCTGACACTTCCAAGAAACAACCTTTGTACAGGTCCACGGG 362
consensus_15674#4      AAAAAAAAAACCCCTTTTTTCCCCTTCCAAAAAAAAGGGGAAATTTTTTAAAACCCGAAA 261
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      CAACTGCAATTAGGTAACTGGAGATACTAGCTTGTAGTTACAAATAGTAGGAGATACTAG 352
                                                                                   

consensus_15674#2      TGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCT 419
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      TGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCT 470
consensus_15674#5      TGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCT 280
consensus_15674#0      TGTGACTCCCAACGATCAGTAAATCAACCTTTGATTCCTCAGCTGCTTGACATATCATCT 422
consensus_15674#4      AAAAAACCCCTTTAAAGGGGGGAAAATTTAAACTGGGGAAAAAAAGGGCAAAAACTTTTC 321
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      CTTGTAGCTTGTGATCGGTTTGGCTCTTGTCTGTCTCGTCATCT--TATACATTTGACTA 410
                                                                                   

consensus_15674#2      CCTTAGGATCTCCTACTTTGATCATTGNCTCTACAGCCACCCCATGCTGCGCGCAGATCT 479
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      CCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACCCCATGCTGCGCGCAGATCT 530
consensus_15674#5      CCTTAGGATCTCCTACTTTGATCATTGTCTCTACAGCCACC------------------- 321
consensus_15674#0      CCTTAGGATCTGCTACTTTGATCATTGGCTCTACAGCCACCCCATGCTGCGCGCAAATCT 482
consensus_15674#4      CCCGGGAAAAAATGGTAACCCCCAAAAATTCCAAAAAAAAAAAAACCCGAAAACAAAAAG 381
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      CATTTGTATCTACTAACCCTGCTCTAGA--CCACATGGACTGGGTTTATATTTTACAATC 468
                                                                                   

consensus_15674#2      GCTTGGCCTTGTCGAGGAGCGCCTGCNAGAGCTGCTGCTG-------------------- 519
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      G-TTGGCTTGGTCGAGGAGCGC-------------------------------------- 551
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      GCTTGGCCTTGGCGAGAAGCGCCTGCGAGAGCTGCTGCTGAACTCGCTCTCGGCCACCGG 542
consensus_15674#4      GGAAAACCCC-------------------------------------------------- 391
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      GACACATCATATCAGGGAGGGTAGAAT--------------------------------- 495
                                                                                   

consensus_15674#2      ------------------------------------------------------------
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      ------------------------------------------------------------
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      TACCATTGTCTTGTGCCGTTCCGGCGCGTGCCCGATGGCATCCTAAAGAGGCCGCGGGAA 602
consensus_15674#4      ------------------------------------------------------------
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      ------------------------------------------------------------
                                                                                   

consensus_15674#2      ------------------------------------------------------------
consensus_15674#6      ------------------------------------------------------------
consensus_15674#1      ------------------------------------------------------------
consensus_15674#5      ------------------------------------------------------------
consensus_15674#0      CTCCAACCTCGGCCGTCGCAGCCGACTGCACGCCCCAGTCACGAGCCGCGCGCTGTGCCC 662
consensus_15674#4      ------------------------------------------------------------
consensus_15674#7      ------------------------------------------------------------
consensus_15674#3      ------------------------------------------------------------
                                                                                   

consensus_15674#2      ---------
consensus_15674#6      ---------
consensus_15674#1      ---------
consensus_15674#5      ---------
consensus_15674#0      GATCGCCCC 671
consensus_15674#4      ---------
consensus_15674#7      ---------
consensus_15674#3      ---------