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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15696#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 779 fasta sequence
[CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA-ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG-CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA-AGGTGCTCGGCGAGGAGGAGAAGG-CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG-AAGC-TGGAG-AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG-C-T-GCGGCT-AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT-GGTGTGTCA-ACTGACAAAAAC-AGGAACTA-TGCTGTCCTGGC-AGGCACTG-TTGC-TGCTTTGA-G-TGGCCTG-GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA-CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA]
[+] EMBL CF340402 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATA ]
[+] EMBL CF305224 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAA ]
[+] EMBL CF338978 [CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCA ]
[+] EMBL CF333889 [ CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGCNTGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNGGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATA ]
[+] EMBL CF333736 [ CAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAGAAAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGACA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTGNNGGTGGTATCTCTTGTCAAA CCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAG ]
[+] EMBL AB029060 [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCGTTGTTTCTAGTCCTTGTTTGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA]
[+] EMBL AU070198 [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTNAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGTCA CTTGACAAAAAC AGGAACTA TGCTGTCCTTGC AGGCACTGTTTGC TGCTTTGANT TGGCCTG GGGTGG ]
[+] EMBL OSR1762A [ AGTTGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTGCC T GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGNGTCAAGATCTGCT GGTGTGTCAct ]
[+] EMBL C98019 [ acgcttccgGTTGGGAGAGAGAGACATTTTCACGGACCCA ACGAAGCGAA ATCCTCTCGTCTCGTGTTCTAGGNTTTCTCGCGN CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGG T AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAAAAAAAAa ]
[+] EMBL CF338965 [ TGGGAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG NGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAA ]
[+] EMBL AU161831 [ GAGAGAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCG AGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGGCCCGCC AGAACGTCTACATCAAGNAAATNGNACACGAG AAGC TTGAG AAGTTTGCCCACAA GNCCCCAACCCAGGA ]
[+] EMBL OS0382A [ GAGAGACAGTTTCACGGAGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CGTCCCGACTAAACGCTGT AAGACTGGAAGCGtttc ]
[+] EMBL BI805593 [ gggCACGGATCCACACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGGTCGATGGA GCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAA G CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGTAAGC TGGAG AAGTTGGCCCACAAGGGCCCC ACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTC AAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CCCTGCACTGAGTTTCCTATAGCATCAAAAAAAa ]
[+] EMBL C27837 [ AGCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGTTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGGTGTGTCA ACTGACANAAACAAGGAACTATTGTTGTCCTGGCAAGGCACTGTTTGCTTGCTT ]
[+] EMBL C74344 [ GCCA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTAGGGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCNGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTTAAGATCTGCT GGTGTGT T ACTGACAAAAAC AGG ACTA TGCTGTCCTGGC A GCACTG TTGC TGCNTTGA G TTGCCTG GGGTGG ]
[+] EMBL BI806423 [ GCC ACGNAGCGAAGATCCTCTCGTCTCGT TTCTAGGTTTTCTC C G CGATGGA GC GCGGCTA GGCTCCATCCACGGCGGC GCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGC GCACAGGTGCTC GCGAGGA GAGAA G CC CCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCCCAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCANACTGACCAAAAC AGGAACTA TGCTGTCCTGGC AGGCCCTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCCAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACANCCCTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCAaaaaaaaaa ]
[+] EMBL AU077722 [ CA ACGAAGCGAAGATCCTCTCGTCTCGTGTTCTA GGTTTCTCGCGG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG C TNGCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCT ]
[+] EMBL OSC2928A [ GG CGATGGAGGCGGCGGCTAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGG CCCAACCCAGGAGAGCAAGCTTCAACCGCA GTG CTT GCGGCT AACGCTGTTAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTGTTTGC TGCTTTGA GTTGGCCTN GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTG ]
[+] EMBL AU165285 [ aATGAAGCCGNCGG TAGGGCTCCATCCAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAAGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTACATGAAAaaa ]
[+] EMBL C29070 [ ATGGAGGCGGCGGCTAGGGCTCCATCNAGGGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGNCGGCA AGGTGCTCGGCGAGGAGGAGAAGG CCGCCGAGAACGTCTACATCAGGAAAATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAANCCAGGAGAGCAAGCTT ]
[+] EMBL AK059442 [ AATGGAACACGAG AAGC TGGAG AAGTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGAT ]
[+] EMBL AU077723 [ GGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTG C T GC GNT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATACAAGATAGTAaaa ]
[+] EMBL AU172795 [ GAGAGCAAGCTTCAACCGCAGGTG C T GCGGCT AACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCT GGTGTGTCA ACTGACAAAAAC AGGAACTA TGCTGTCCTGGC AGGCACTG TTGC TGCTTTGA G TGGCCTG GGGTGGTATCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAG TTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTCTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTGATTGAAGAGGAATTCGGATAAAAaaaaaa ]
consensusID : consensus_15696#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 357 fasta sequence
[ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF333735 [ACCGCAGGTGTTGCGGCTAACGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAAAAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTATTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATCCTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACACACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTTTTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15696#0 CATCAGTGGGGGAGTTGGGAGAGAGAGACAGTTTCACGGAGCCAACGAAGCGAAGATCCT 60
consensus_15696#1 ------------------------------------------------------------
consensus_15696#0 CTCGTCTCGTGTTCTAGGGTTTCTCGCGGCGATGGAGGCGGCGGCTAGGGCTCCATCCAG 120
consensus_15696#1 ------------------------------------------------------------
consensus_15696#0 GGCGGCGGCGAGGTTCGTGCAGCGCAGGCTCTTTTCCTCCGGCGGCAAGGTGCTCGGCGA 180
consensus_15696#1 ------------------------------------------------------------
consensus_15696#0 GGAGGAGAAGGCCGCCGAGAACGTCTACATCAAGAAAATGGAACACGAGAAGCTGGAGAA 240
consensus_15696#1 ------------------------------------------------------------
consensus_15696#0 GTTGGCCCACAAGGGCCCCAACCCAGGAGAGCAAGCTTCAACCGCAGGTGCTGCGGCTAA 300
consensus_15696#1 ----------------------------------------ACCGCAGGTGTTGCGGCTAA 20
********** *********
consensus_15696#0 CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATCTGCTGGTGTGTCAACTGACAA 360
consensus_15696#1 CGCTGTGAAGACTGGAAGCGGCTCAACGGAGTCAAGATTTGCTGGTGTGACAACTGACAA 80
************************************** ********** **********
consensus_15696#0 AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 420
consensus_15696#1 AAACAGGAACTATGCTGTCCTGGCAGGCACTGTTGCTGCTTTGAGTGGCCTGGGGTGGTA 140
************************************************************
consensus_15696#0 TCTCTTGTCAAAGCCTAAGAAGTCTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 480
consensus_15696#1 TTTCTTGTCAAAGCCTAAAAAGTTTGAAGATATAGTGGACTGAAGGTGGTTAATGAGATC 200
* **************** **** ************************************
consensus_15696#0 CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 540
consensus_15696#1 CTAGACGGTCTGTCATTGAGTTTCACCCTGTTTTACTTGTTTAGAAATAAATGCTGAACA 260
************************************************************
consensus_15696#0 CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 600
consensus_15696#1 CACTGCACTGAGTTTCCTATAGCATCACTAAAACTTTCAAGTATGCACCCGAGATATGTT 320
************************************************************
consensus_15696#0 CTCAGTTCTTCATGCCCTGTTTTGACTGTTGGCACTGTTCTCTGATGCTGCATCCTTTTG 660
consensus_15696#1 TTCAGTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 357
****** **** * *
consensus_15696#0 ATTGAAGAGGAATTCGGATACAAGATAGTACATGAAATCCCAAAAAAAAAAGTCCTTGTT 720
consensus_15696#1 ------------------------------------------------------------
consensus_15696#0 TGAACCAAGTGTTGTTTTAAATTTCAGCAAGTGATGGTTTTATTTCTAAAAAAAAAAAA 779
consensus_15696#1 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||