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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1027 fasta sequence
[TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT-GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC-GGGACTTACT-CCTGGACTTCACGG-CTTCCACCTCCACGAG-TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA-CATTTTAACCCAAACAA-TTTGACG-CACGGTGCA-CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG-AAACATTGTTG-CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA-AG-CAGATTCCTCTGAGTGGCCC-AAATTCTG-TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG-AAGATGATTTGGGGAAGGG-TGGCCATGAGCTTAGTCTCAGTACTGGAAATG-CTGGTGGGCGACTTGCATG-CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA-AGTTGCAG-CTGAAGTGTCAGTATCGCATCCATGT-CACCCTTTTTGTCATCTTCGAGCCTGA-GGCAGTCGTTCTTGTATCACAT-GGATTTCGCAACAT-GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT-AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAAAA]
[+] EMBL AK059841 [TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAA ]
[+] EMBL AK104240 [TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCATCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTG ]
[+] EMBL AK068627 [ CAGGTCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTAAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAAT ]
[+] EMBL AK104013 [ TCAGGCACTTCACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTG ]
[+] EMBL BE041119 [ ACCAACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCAACCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGGGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTTCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGNG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGNTGTTCATGAGCTTG AAGATGATTTGGGGAAAGG TTGGCATGAACTTAGTCTCAATACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTG ]
[+] EMBL OSC995 [ CCAACCCTCTGCCTCCCTTCCNCCNCCCTCCNCCNCCGCATNCAAGCCATCCTCGCCGCTGCCATNGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGNCGCCGG CCCGCGG GCCGCCGCTNGCCAGGGCGCTCGTCGTCGCCGAGNNCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTNCCAGGTTGAGGGAGTCGTCACCNTCACCCAGGATGACCAAGGTNCTACAACAGTGAATGTCCGTGTGACGGGGACTTACT ]
[+] EMBL OSD239 [ ACCCTCTGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATG ]
[+] EMBL CA758851 [ TGCCTCCCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGGCATGAGCTTAGT ]
[+] EMBL CB680357 [ CGCATCCTAGCCATCCTCGCCGCTGCCATGGCCGCCCAGACCCTCTTGTTCTCCGCCACCGCCCCTCCCGCCTCCCTTTTCCAGTCCCCTTCCTCTGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGGCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCATAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGAGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGACGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCACTCGTTCTTGTATCACAT GGATTTCGCAACAT G ]
[-] EMBL CB680358 [ tTTCCTCTGCCCGCCCTTTCCACTCGTTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCT GCCAGGGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCAGGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCGTGTGAC GGGACTTACT CCTGGACTTCACGG CTTCCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAAGTATAAATGGTGAAACATGAGCTGTTC ]
[+] EMBL AU097411 [ CCGTGTGACGGGGACTTACTCCCTGGACTTCACGGNTTTCCACCTCCACGAGTTTTGGCGATACTACGAATGGGTGCATATCAACAGGACCACCATTTTAACCCAAACAATTTTGACGCCACGGTGCACCCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGGNAANCATTGTTGCCCAATGCTGAAGTTGTAGCTGAGGCACCCATTGTTGATA AGCCAGATTCCTCTGAGTGGCCCAAAATTCTG TTGTTGGGAGANCATCCG TGTCCATGAGCTTGAAAGATGA TTGGGGAAGGGTTGCCCATGAGCTTAGTCTCAGTCCTGGAAATG CTGNTGGCCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCNTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCNTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACAAAAa ]
[+] EMBL CF328868 [ CCACCTCCACGAG TTTGGCGATACTACGAATGGGTGCATATCAACAGGACCA CATTTTAACCCAAACAA TTTGACG CACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTAGTGGGCGACTTG ATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGTNCACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAAC TGAGCTGTTCTGGGTATACAACGCAT AAAAA ]
[+] EMBL BI804897 [ CG CACGGTGCACCCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTGCCCAATGCTGAAGGTGTAGCTGAGGCAACCCTTGTTGATA A CAGATTCCTCTGAGTGGCCC CAATTCTG TTGTTGGGAGAGCCTTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGCCCCTGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCAT CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCACAGTTGCAGCCTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCCGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCCAAAAAaaaaa ]
[-] EMBL CF328867 [ ACGGTGCA CCAGAAGATGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGAGGCAACCATTGTTGATA AG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTAGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAA ]
[+] EMBL BM419495 [ atTGAAGTCCGTCATGCGGGTGACCTGGG AAACATTGTTG CCAATGCTGAAGGTGTAGCTGA GCAACCATTGTTGATATAG CAGATTCCTCTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATAC ACGCAT AAAAAAAACCATGTGTTATACATAACA CCTTGTTGCTGGCTGTACTTTCGTGCTTCaaaaaa ]
[+] EMBL BI795714 [ ATGCTGAAGGTGTA CTGAGCCAACCATTGTTGATA A CAGATTCCTCTGAGTGGCCC AAATTCTGTTTTTTGGGAGA CATTCGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG T GCCATGAGCTTAGTCTCAGTACTGGAAATGTCTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTC AACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAA ]
[+] EMBL AA752434 [ gagTCTGAGT GCCC AA TCTG TTGTYSGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGSCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGA CCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT SGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGC AATAAGTGTCGTCACAT CCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTG ]
[+] EMBL AA751739 [ CTGAGTGGCCC AAATTCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACATGGGATTTCGCAACATGGGATGCTTAATAGTATCTGTTGATCGT ]
[+] EMBL AA749607 [ TCTG TTGTTGGGAGAGCATTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATG CGGTGTTGTTNNGCTGACCCCGTTGTAGGNNNCTGCA AGTT NNGAAGTNTCAGTATCGCATCCATGT CACCCTTTT ]
[+] EMBL BM419230 [ TTTGTTGTTCATGAGCTTG AAGATGATTTGGGGAAGGG TGGCCATGAGCTTAGTCTCAGTACTGGAAATG CTGGTGGGCGACTTGCATGNCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCA AGTTGCAG CTGAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCGTCGAGCCTGA GGCAGTCGTTCTTGTATCACAT GGATTTCGC ACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCTGATCTAAAAAAAAAA]
[+] EMBL CF336722 [ GAAGTGTCAGTATCGCATCCATGT CACCCTTTTTGTCATCTTCGAGCCTGA GGCAGTCGTTCTTGTAT ACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATGAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTTCAAAAAAAAAAAAAAA ]
[+] EMBL AA751501 [ TCG GCACGAGGGCAGTCGTTCTTGTATCACAT GGATTTCGCAACAT GGATGCTTAATAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCAT AAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTTCGTGCTT ]
consensusID : consensus_15803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCCTGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTTGATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTGTTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCATAAAAAAAACCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU172732 [GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTGCAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCCTGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTTGATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTGTTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCATAAAAAAAACCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15803#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 170 fasta sequence
[AAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF299400 [AAGTGTCGTCACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAACGCATAAAAAAAAACCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15803#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 123 fasta sequence
[ACCCTCTNCCTCCCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTNCCATGACCGCANAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC]
[+] EMBL AU197432 [ACCCTCTNCCTCCCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCATCCTCGCCGCTNCCATGACCGCANAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15803#0 ------------------------------------------------------------
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 GAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTTGTAGGTCGCTG 60
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 ------------------------------------------------------------
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 CAAGTTGCAGCTAAAGTGTCAGTATCGCATCCATGTCNCCCTTTTTGTCATCTTCGAGCC 120
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 ------------------------------------------------------------
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 TGAGGCAGTCGTTNTTGTATCNCATGGATTTCGCAACATGGATGCTTAATAGTATCTGTT 180
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 -------------TAAACCTTATCATCGTCAGGTCAGGCACTTCACCAACCCTCTGCCTC 47
consensus_15803#3 ------------------------------------------------ACCCTCTNCCTC 12
consensus_15803#1 GATCGTTCGTCTCCCAGTAATAAAATTTAGTTGAGCAAATAAGNGTCGTCNCATCCCCTG 240
consensus_15803#2 ----------------------------------------AAGTGTCGTCACATCCCCTG 20
* * ***
consensus_15803#0 CCTTCCGCCGCCCTCCGCCGCCGCATGCAAGCCAT---CCTCGCCGCTGCCATGGCCGCC 104
consensus_15803#3 CCTTCCGCCGTCCTCCGCCGCCGCATGCAAGCCAT---CCTCGCCGCTNCCATGACCGCA 69
consensus_15803#1 TTNTCCNCCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTNTGGGNATACAACCGCA 300
consensus_15803#2 TTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGTATACAAC-GCA 79
*** ** * ** * *** * * * * **
consensus_15803#0 CAGACCCTCTTGTTCTCCGCCACCGCCCCTCC-CGCCTCCCTTTTCCAGTCCCCTTCCTC 163
consensus_15803#3 NAGACNTAGTTGTTCTCCGTCACCGACTCTCNATGCCTCTCANATTCNACATAC------ 123
consensus_15803#1 TAAAAAAAA---CCATGTGTTATAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------- 348
consensus_15803#2 TAAAAAAAAA--CCATGTGTTATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 137
* * * * *
consensus_15803#0 TGCCCGCCCTTTCCACTCGCTCCGCCTCGCCGCCGGCCCCGCGGGCGCCGCCGCTGCCAG 223
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 AAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- 170
consensus_15803#0 GGCGCTCGTCGTCGCCGACGCCACCAAGAAGGCCGTCGCCGTGCTCAAGGGCACCTCCCA 283
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 GGTTGAGGGAGTCGTCACCCTCACCCAGGATGACCAAGGTCCTACAACAGTGAATGTCCG 343
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 TGTGACGGGACTTACTCCTGGACTTCACGGCTTCCACCTCCACGAGTTTGGCGATACTAC 403
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 GAATGGGTGCATATCAACAGGACCACATTTTAACCCAAACAATTTGACGCACGGTGCACC 463
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 AGAAGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATTGTTGCCAATGCTGAAGGTGT 523
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 AGCTGAGGCAACCATTGTTGATAAGCAGATTCCTCTGAGTGGCCCAAATTCTGTTGTTGG 583
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 GAGAGCATTCGTTGTTCATGAGCTTGAAGATGATTTGGGGAAGGGTGGCCATGAGCTTAG 643
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 TCTCAGTACTGGAAATGCTGGTGGGCGACTTGCATGCGGTGTTGTTGGGCTGACCCCGTT 703
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 GTAGGTCGCTGCAAGTTGCAGCTGAAGTGTCAGTATCGCATCCATGTCACCCTTTTTGTC 763
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 ATCTTCGAGCCTGAGGCAGTCGTTCTTGTATCACATGGATTTCGCAACATGGATGCTTAA 823
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 TAGTATCTGTTGATCGTTCGTCTCACAGTAATAAAATTTAGTTGAGCAAATAAGTGTCGT 883
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 CACATCCCCTGTTCTCCACCCTGTCAAACTATAAATTGTGAAACATGAGCTGTTCTGGGT 943
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 ATACAACGCATAAAAAAAACCATGTGTTATACATAACAGCCTTGTTGCTGGCTGTACTTT 1003
consensus_15803#3 ------------------------------------------------------------
consensus_15803#1 ------------------------------------------------------------
consensus_15803#2 ------------------------------------------------------------
consensus_15803#0 CGTGCTTCTGATCTAAAAAAAAAA 1027
consensus_15803#3 ------------------------
consensus_15803#1 ------------------------
consensus_15803#2 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||