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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15989#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1434 fasta sequence
[TCATCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA-G-AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA-GAAGTTCGGGC-TGCCGTTGC-TGCCGCCGTC-GAAGAGGGGCGGCTCCGAC-TTCCGGCGAGGCGCGAAC-ATGGCGATC-ATCGGCGCCACCACCATGGAC-TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCGGGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCTACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAG-TACGGCTGCCTC-ACCCGC-TTCAACA-CCCTC-TCCTCCCG-CCATAACTCCCTCCT-CCAGGCCAAGGTCTCCTCCCTCCAGAGCAAGTACCCCTGGGCTCG-CATCATGTACGCCGACTTCTACT-CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG-CACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCA-GAACGGCG--CGAGGTGCGGCATG-TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG-CATCCATCT-CA-CGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC-GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG-CTGATTTGATTTGTTTAGCAGA-AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA-GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGTAAAAAAAAAAATGGTTTGGTTGG]
[+] EMBL AK121780 [TCATCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGAC TTCCGGCGAGGCGCGAAC ATGGCGATC ATCGGCGCCACCACCATGGAC TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCGGGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCTACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAG TACGGCTGCCTC ACCCGC TTCAACA CCCTC TCCTCCCG CCATAACTCCCTCCT CCAGGCCAAGGTCTCCTCCCTCCAGAGCAAGTACCCCTGGGCTCG CATCATGTACGCCGACTTCTACT CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG CACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CA CGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGT ]
[+] EMBL AK104883 [ CATCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGAC TTCCGGCGAGGCGCGAAC ATGGCGATC ATCGGCGCCACCACCATGGAC TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCGGGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCTACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAG TACGGCTGCCTC ACCCGC TTCAACA CCCTC TCCTCCCG CCATAACTCCCTCCT CCAGGCCAAGGTCTCCTCCCTCCAGAGCAAGTACCCCTGGGCTCG CATCATGTACGCCGACTTCTACT CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG CACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CA CGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGT ]
[+] EMBL AK061497 [ TCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGAC TTCCGGCGAGGCGCGAAC ATGGCGATC ATCGGCGCCACCACCATGGAC TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCGGGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCTACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAG TACGGCTGCCTC ACCCGC TTCAACA CCCTC TCCTCCCG CCATAACTCCCTCCT CCAGGCCAAGGTCTCCTCCCTCCAGAGCAAGTACCCCTGGGCTCG CATCATGTACGCCGACTTCTACT CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG CACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACTACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CA CGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGTAATTTGTTGCATGGTTTGGTTGG]
[+] EMBL AK104394 [ TCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGAC TTCCGGCGAGGCGCGAAC ATGGCGATC ATCGGCGCCACCACCATGGAC TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCGGGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCTACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAG TACGGCTGCCTC ACCCGC TTCAACA CCCTC TCCTCCCG CCATAACTCCCTCCT CCAGGCCAAGGTCTCCTCCCTCCAGAGCAAGTACCCCTGGGCTCG CATCATGTACGCCGACTTCTACT CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG CACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CA CGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATT ]
[+] EMBL OSS11789A [ CATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGCTTGCCGCCGTT GAAGAGGGGCGG ]
[+] EMBL AU032556 [ ggnATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCG ]
[+] EMBL OSS12788A [ AGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTNGCGTTCGCGGTTGCGTCCGCNATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTNACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGC ]
[+] EMBL OSS12553A [ AGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGG CA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGNCGCNTCGTCGTCGACTTCCTCGCGGAGGAAGTTCGGGCTTGCCGTTGC TGCCGCCGTCGGAAGAGGGGCGGCTCCGAC TTCCGGCGAGNCGCGAACAATGGGGATCAATGGGNGGCAACAACATGGACTTCCGG ]
[+] EMBL CA755618 [ GTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGAC TTCCGGCGAGGCGCGAAC ATGGCGATC ATCGGCGCCACCACCATGGAC TCCGGCTTCTTCCAGTCGCTCGGCATCGGCGACNAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCATGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCGGCGAGTTCGGNGGCAACGACTACCACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGGCGGCGGGGCAGAGCGGCACCATCGTGGAC GGATC ]
[+] EMBL OSS14296A [ GTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTG GTCCNTCATGTTCGTGGCCGTCTCCG CA GNAAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCNCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCG CACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TGCCGCCGTC GAAGAGGGGCGG TCCNACTTTCCNGCGAGGCGCGAACAATGGCGATC ATCGGCG CANCACCATGGAC TTCGGCTTCTTCCAGTCG TTNGCATC GCGACAAGATCTNGAACAATGG CCCCT AAAAACCAGATCCAG ]
[+] EMBL OSS14610A [ CATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTNNGGCGTTCGCGGTTGCNTCCGCCATGTTCGTGGCCGTCTCCGGNCA G AANTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGNCGGCCTGACGCTCACCCAGCCTCCCTACGGCG ]
[+] EMBL OSS4550A [ CGAGCTGAATCTAAACCTTTGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCNTCCGCCATGTTCGTGGCCGTNTCCGG CA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGAGGAAGTTCGGGC TNCCGTTGC TGCCGCCGTC GAAGAGGGGCGGCTCCGACTTTCCGGCGAGGCGCGAA ]
[+] EMBL OSS2971A [ cntnCGANCTGAATCTAAACCTTTNCAACAATGGCGGCGCATNTTGTTGTGGCGTTCGCGGTTGCTTCCGCCATGTTCGTGGCCGTCTCCGGCCA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCNTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGTTGCTCCGACGGCCG CTCGTCGTCGACTTCCTCGCGGA GAAGTTCGGGC TGCCGTTGC TTCCGCCGTC GA ]
[+] EMBL OSS1321A [ TGCAACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGG CA G AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACANCGGCAACCTCTGCGTGAACGGCCCCCCCGNCGGCCTGACGNTCANCCAGCCTNCCTANGGCGAGANCT ]
[+] EMBL OSS13965A [ AACAATGGCGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCNTCCGCCATGTTCGTGGCCGTCTCCGGCCATG AAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCGTGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCGGCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCC ]
[+] EMBL AU075908 [ CCAGTTACGGCTGCNTCAACCCGCTTTCAANACCCCTCTTCCTCCCGNCCATAACTCCCTCCTCCCAGGCCAAAGTCTCCTCCCTCCAGAGCAA TACCCCTGGGCTCGCCATCATGTACGCCGACTTCTACTCCCCAC TCTACGACATGGTCAAATCCCCCTCCAACTACGGGTTTAG CACGAATTTGAGGGCGTGCTGCGGGNCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CA CGGAGGCGNCGTACAAGCANATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGTAAAAAAAAAA ]
[+] EMBL BI798894 [ GACTTCTACT CCCACGTCTACGACATGGTCAAATCCCCCTCCAACTAC GGTTTAG CACGAATTTGAGGGCGTGCTGCGGGCCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATG TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCGTTGAGCTGGGACGG CATCCATCT CACCGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTC ACGGGCCCTACTGCCACCCGCCGATCATGTCCTAGATCATCGCCGGC GGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGC AGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGC ATTTAATTATGTGTTGCCATTAATTAATTAAATCTTAGTAAAAAAAAAA ]
[+] EMBL AU032557 [ CTCCAACTACGGGTTTAGNCACGAATTTGAGGNCTTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCA GAACGGCG CGAGGTGCGGCATGTTCGGGAGCCTACGCGTGCTCCAACCCGTCGTCNTCGTTGAGCTGGGACGGTCATCCATCTCCA CGGAGGCGGCGTACAAGCAGATCNCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATC CCGGC NGCNGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGTAATTAAAAAA ]
[+] EMBL BI798443 [ TACCATGATCGGCGTCCGAGTTCCGCCAT TCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTC TTGAGCT GGACGG CATCCATCT CA CGGA GCGGCGTACAA CAGATCGCCGACGGGTGGTTCAACGGGCCCTACTGCCACCCGCCGATCATGTCCTAGATCATC CCGGC GGCGGCGACGGCGGCCGGAGGAT GCCGGCTAGCTGCTG CTGATTTGATTTGTTTAGCAGA AGAAGAGAAGAAAAATGGATAGCCAGAGGAAGAACGAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCCATTAATTAATTAAATCTTAGTAAAAAAAAAA ]
[+] EMBL BI806660 [ nctnGCCACCCTCCGATCATGCCCTAGATCATCCACGGCAGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGTCTGATTTGATTTGTTTAGCAGAGAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGCA GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTC TTGT GGTGGTTAATTTGTTTTTGTTTTA GTAATGCACATTTGTGTAGTATGTATGAGATTGGGA GCCATTTAATTATGTGTTNCAATTAATTAACNAAATCTTAGTAAAAAA ]
consensusID : consensus_15989#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 629 fasta sequence
[GAGCTATTCTGCTGGAACGGTAAAGCGATAGTAGCGGATTTTCTTGGATGGTTTGAAGTTTATGAATGATTAATTCGACGGTTTTTTGTGATGAATTTGCGCAGGGTTTAGCACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCAGAACGGCCGCG-AGGTGCGGCATGTCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCG-TTGAGCTGGGACGGCATCCATCTCACGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGCGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGCTGATTTGATTTGTTTAGCAGAAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAAGAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAAAAATAGTAATTTGTTGCNAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB639179 [GAGCTATTCTGCTGGAACGGTAAAGCGATAGTAGCGGATTTTCTTGGATGGTTTGAAGTTTATGAATGATTAATTCGACGGTTTTTTGTGATGAATTTGCGCAGGGTTTAGCACGAATTTGAGGGCGTGCTGCGGGGCGGGAGGAGGGAAGTACAACTACCAGAACGG CGCG AGGTGCGGCATGTCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCG TTGAGCTGGGACGGCATCCATCTCACGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGCGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGCTGATTTGATTTGTTTAGCAGAAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAAGAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTA ]
[+] EMBL AU033098 [ AGTACAACTACCAGAACGGCCGCGAAGGTGCGGCATNTCGGGAGCCTACGCGTGCTCCAACCCGTCGTCTTCGTTTGAGCTGGGACGGCATCCATCTCACGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGCGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGCTGATTTGATTTGTTTAGCAGAAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAAGAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAAAAAAAAAA ]
[+] EMBL CB682116 [ acgccttt AGGTGCGGCATGTCGGGAGCCTACGCGTGCTCCAACCCGTCGTCGTCG TTGAGCTGGGACGGCATCCATCTCACGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCATGCCCTAGATCATCGCCGGCGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGCTGATTTGATTTGTTTAGCAGAAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAAGAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATG ]
[+] EMBL AU197997 [ GGCATCCATCTCACGGAGGCGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCNCCCGCCGATCATGCCCTAGATCATCGCCGGCGGCGGCGACGGCGGCCGGAGGATGGCCGGCTAGCTGCTGCTGATTTGATTTGTTTAGCAGAAGAAGAGAAGAAAAATGGATAGCAAGAGGAAGAAGAAGACATCTTGCGATCGACTGGGAAATGAATAANATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCNCATTTGTGTAGTATGTATGAGATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATNTTAGTAATTTGTTGCNAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU197970 [ GCGACGGCGGCCGGAGGATGGCCGGCTAACTGCTGCTGATTTGATTTGTTTAGCNGAAGAAGAGAAGAAAAATGGATAGCNANAGGAANAAGAAGACNTNTTGCGATCGACTGGGAAATGAATAANATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCNCATTTGTGTAGTATGTATNANATTGGGAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATNTTAGTAATTTGTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU075891 [ ATTTGATTTGTTTANCAGAAGANGAGANNNAAAATGGATAGCAAGAGGAAGAAGAAGACANCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGANATTGGGAGGNNATTTAATTATGTGTTGNNATTNATTNNTTAAAAAA ]
consensusID : consensus_15989#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence
[GTCCNAGCNTTGNCGGGGTTTTGGGCTTNGTANTTTTTTGATGGGTGTCTTTTCTTTCGTGGGCGTGGGAGGGTGGGGGGTATGTTTCCTCCTAGTCCCNGTGNCGGGCGCCGAGGGTTGCGGGCCACTGTCGGGATGCCTACGCGTGCTCCNGTACCNGTCTTCGTCGTTGTAGTCTGGGACGGCATCCACTCTCTCGGAGGCGGCGTNCAAGCAGATCNCCGNCGGTGGGTCACGGCCCTACTGCCACCCGCCGATCATGCCCTATGATCATCCCCGGCGGCGGCGAGCGCCGTCCGGAGGATGCCGGCTATTCTTCTGCTGATTTGATTTGTTTAGCCAGAAGAAGAGAAGAAAAATGGATACCCNAGAGGAAGAAGAAGACATCTTNCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGCATTTAATTATGTGTNGCCATTAAAAAAAAAA]
[+] EMBL BI807308 [GTCCNAGCNTTGNCGGGGTTTTGGGCTTNGTANTTTTTTGATGGGTGTCTTTTCTTTCGTGGGCGTGGGAGGGTGGGGGGTATGTTTCCTCCTAGTCCCNGTGNCGGGCGCCGAGGGTTGCGGGCCACTGTCGGGATGCCTACGCGTGCTCCNGTACCNGTCTTCGTCGTTGTAGTCTGGGACGGCATCCACTCTCTCGGAGGCGGCGTNCAAGCAGATCNCCGNCGGTGGGTCACGGCCCTACTGCCACCCGCCGATCATGCCCTATGATCATCCCCGGCGGCGGCGAGCGCCGTCCGGAGGATGCCGGCTATTCTTCTGCTGATTTGATTTGTTTAGCCAGAAGAAGAGAAGAAAAATGGATACCCNAGAGGAAGAAGAAGACATCTTNCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGTGGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGGGAGCATTTAATTATGTGTNGCCATTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15989#0 TCATCCATCCATCAAGTTGGTCATCGAGCTCGAGCTGAATCTAAACCTTTGCAACAATGG 60
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 CGGCGCGTGTTGTTGTGGCGTTCGCGGTTGCGTCCGCCATGTTCGTGGCCGTCTCCGGCC 120
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 AGAAGTTCAACGCCATCTTCAGCTTCGGCGACTCCATGTCCGACACCGGCAACCTCTGCG 180
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 TGAACGGCCCCCCCGCCGGCCTGACGCTCACCCAGCCTCCCTACGGCGAGACCTTCTTCG 240
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 GCCGCGCCACCTGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGCGGAGAAGT 300
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 TCGGGCTGCCGTTGCTGCCGCCGTCGAAGAGGGGCGGCTCCGACTTCCGGCGAGGCGCGA 360
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 ACATGGCGATCATCGGCGCCACCACCATGGACTCCGGCTTCTTCCAGTCGCTCGGCATCG 420
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 GCGACAAGATCTGGAACAATGGCCCCCTCAACACCCAGATCCAGTGGTTCCAGCAGCTCA 480
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 TGCCCTCCATCTGCGGCTCATCTTGCAAGACGTACCTGTCCAAGTCGCTGTTCGTGCTCG 540
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 GCGAGTTCGGGGGCAACGACTACAACGCGCAGCTGTTCGGCGGGTACACGCCGGAGCAGG 600
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 CGGCGGGGCAGAGCGGCACCATCGTGGACGGGATCGGGAAGGGGGTGGAGCAGCTGATCG 660
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 GGCTGGGCGCCATGTACGTCGTCGTCCCCGGCGTGCTCCCCGTCGGCTGCTTCCCCATCT 720
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 ACCTCACGCTGTACGGCACCTCCAACGCCGGCGACTACGACCAGTACGGCTGCCTCACCC 780
consensus_15989#1 ------------------------------------------------------------
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 GCTTCAACACCCTCTCCTCCCGCCATAACTCCCTCCTCCAGGCCAAGGTCTCCTCCCTCC 840
consensus_15989#1 --------------------------GAGCTATTCTGCTGGAACGGTAAAGCGATAGT-- 32
consensus_15989#2 ------------------------------------------------------------
consensus_15989#0 AGAGCAAGTACCCCTGGGCTCGCATCATGTACGCCGACTTCT--ACTCCCACGTCTACGA 898
consensus_15989#1 --AGCGGATTTTCTTGGA-TGGTTTGAAGTTTATGAATGATT--AATTCGACGGTTTTT- 86
consensus_15989#2 ---------------------GTCCNAGCNTTGNCGGGGTTTTGGGCTTNGTANTTTTTT 39
* * * *
consensus_15989#0 CATGGTCAAATCCCCCTCCAACTACGGGTTTAGCACGAATTTGAGGGCGTGCTGCGGGGC 958
consensus_15989#1 TGTGATGAATTTGCGCA--------GGGTTTAGCACGAATTTGAGGGCGTGCTGCGGGGC 138
consensus_15989#2 GATGGGTGTCTTTTCTTTC----GTGGGCGTGGGAGGG--TGGGGGGTATGTTTCCTCCT 93
** * *** * * * * * * *** ** * *
consensus_15989#0 GGGAGGAGGGAAGTACAACTACCAGAACGGC-GCGAGGTGCGGCATGTCGGGA-GCCTAC 1016
consensus_15989#1 GGGAGGAGGGAAGTACAACTACCAGAACGGCCGCGAGGTGCGGCATGTCGGGA-GCCTAC 197
consensus_15989#2 AGTCCCNGTGNCGGGCGCC------GAGGGTTGCGGGCCAC----TGTCGGGATGCCTAC 143
* * * * * * * ** *** * * ******** ******
consensus_15989#0 GCGTGCTCCA--ACCCGTCGTCGTCGTTGAG--CTGGGACGGCATCCA-TCTCACGGAGG 1071
consensus_15989#1 GCGTGCTCCA--ACCCGTCGTCGTCGTTGAG--CTGGGACGGCATCCA-TCTCACGGAGG 252
consensus_15989#2 GCGTGCTCCNGTACCNGTCTTCGTCGTTGTAGTCTGGGACGGCATCCACTCTCTCGGAGG 203
********* *** *** ********* *************** **** ******
consensus_15989#0 CGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCA 1131
consensus_15989#1 CGGCGTACAAGCAGATCGCCGACGGGTGGGTCAACGGGCCCTACTGCCACCCGCCGATCA 312
consensus_15989#2 CGGCGTNCAAGCAGATCNCCGNCGG-TGGGTCAC--GGCCCTACTGCCACCCGCCGATCA 260
****** ********** *** *** ******* ************************
consensus_15989#0 TGCCCTA-GATCATCGCCGGCGGCGGCGA-CGGCGGCCGGAGGATGGCCGGCTAG-CTGC 1188
consensus_15989#1 TGCCCTA-GATCATCGCCGGCGGCGGCGA-CGGCGGCCGGAGGATGGCCGGCTAG-CTGC 369
consensus_15989#2 TGCCCTATGATCATCCCCGGCGGCGGCGAGCGCCGTCCGGAGGATG-CCGGCTATTCTTC 319
******* ******* ************* ** ** ********** ******* ** *
consensus_15989#0 TGCTGATTTGATTTGTTTAGC-AGAAGAAGAGAAGAAAAATGGATAGC-AAGAGGAAGAA 1246
consensus_15989#1 TGCTGATTTGATTTGTTTAGC-AGAAGAAGAGAAGAAAAATGGATAGC-AAGAGGAAGAA 427
consensus_15989#2 TGCTGATTTGATTTGTTTAGCCAGAAGAAGAGAAGAAAAATGGATACCCNAGAGGAAGAA 379
********************* ************************ * **********
consensus_15989#0 GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGT 1306
consensus_15989#1 GAAGACATCTTGCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGT 487
consensus_15989#2 GAAGACATCTTNCGATCGACTGGGAAATGAATAAGATGGTGATTAGTTGATTTTCGTTGT 439
*********** ************************************************
consensus_15989#0 GGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGG 1366
consensus_15989#1 GGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGG 547
consensus_15989#2 GGGTGGTTAATTTGTTTTTGTTTTAGGTAATGCACATTTGTGTAGTATGTATGAGATTGG 499
************************************************************
consensus_15989#0 GAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAATCTTAGTAA--------AAAAA 1418
consensus_15989#1 GAGGCAATTTAATTATGTGTTGCAATTAATTAATTAAAAAATAGTAATTTGTTGCNAAAA 607
consensus_15989#2 GAGC--ATTTAATTATGTGTNGCCATTAAAAAAAAAA----------------------- 534
*** ************** ** ***** ** **
consensus_15989#0 AAAATGGTTTGGTTGG------ 1434
consensus_15989#1 AAAAAAAAAAAAAAAAAAAAAA 629
consensus_15989#2 ----------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||