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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16391#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1711 fasta sequence
[AGACGAGCGGAGGCGCACGAGAGCACGATGAGGATTTGATTTTCTTTTTCTTTCTTTTGGTTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGGCGCTG-TGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCGGCGGCGGCGAATCGAAGGTGTCGCCGG-AGATCGCGCCGGTGAGCGGCGGGGAGGGGGAGGGAGAGGAGGAGGAGGGGGAGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGGAGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGGCCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGGTGTCCGTCGTGCGGCCGCCGCTGGAGTGCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC-GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC-CAGAG-CACCGCATCAGATCCATTGA---AGAAGCTGATTAGCACCT-CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT-CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC-CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA-CACCGTGCATATGGATGGGATCT-CCGTTGATAGCG-CGGATAG-CCTGAAG-CCCTGAACTATAGCG-CCCCTGTTG-AACC-AGGAGAGTAAGGTGTAAAAGGGCGA-CAGGGGCACACTGCACTGAACA-CACC-GTGTCCCTAACTCT-CGACTCT-CTCTTCTCT-TT-TTCT-CTCGTCT-AATGATGT-GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG-ATGGTATAACTCTTTGTTGTAAATGGCA-CTCCTTTTCACTTGCTGA-TGTA-CCCCGTGCATAATGAATGTACCATTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK061747 [AGACGAGCGGAGGCGCACGAGAGCACGATGAGGATTTGATTTTCTTTTTCTTTCTTTTGGTTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTA TTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGGCGCTG TGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCGGCGGCGGCGAATCGAAGGTGTCGCCGG AGATCGCGCCGGTGAGCGGCGGGGAGGGGGAGGGAGAGGAGGAGGAGGGGGAGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGGAGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGGCCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGGTGTCCGTCGTGCGGCCGCCGCTGGAGTGCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGT ]
[+] EMBL CB636633 [ ATTTGATTTTCTTTTTCTTTCTTTTGGTTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGGCGCTG TGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCCGCGGCGGCGAATCGAAGGTGTCGCCGG AGATCGCGCCGGTG ]
[+] EMBL CB652662 [ TTCTTTTTCTTTCTTTTGGTTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGGCGCTG TGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCGGCGGCGGCGAATCGAAGGTGTCGCCGG AGATCGCGCCGGTGAGCGGCGGGGAGGGGGAGGGAGAGGAGGAGGA ]
[+] EMBL AU029786 [ CTTTTGGTTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATNGCGCTG TGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGANTCGGCGGCGGCGAATCGAAGGTGTCGCCGGAAAATCGCGCCGGTtaaacg ]
[+] EMBL AK098851 [ GTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGGCGCTG TGGC GTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCGGCGGCGGCGAATCGAAGGTGTCGCCGG AGATCGCGCCGGTGAGCGGCGGGGAGGGGGAGGGAGAGGAGGAGGAGGGGGAGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGGAGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGGCCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGGTGTCCGTCGTGCGGCCGCCGCTGGAGTGCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTCTCCA ]
[+] EMBL C27671 [ TTTATTTTTTTTGCTCGTCTCGTCTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTCGTCTCGAAGCTTCTGGAAGCNTCGGGGGGAGGGATCCCGGGCC GGCTCG CCNCANTGGC CTGNTGGCGTNGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGG ]
[+] EMBL CB658348 [ GAGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGGAGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGGCCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGGTGTCCGTCGTGCGGCCGCCGCTGGAGTGCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTT CATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTT CAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATG ]
[+] EMBL CF326171 [ AGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGGAGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGGCCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGG ]
[+] EMBL AU070331 [ GCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTT ]
[+] EMBL CF325527 [ GCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATC ]
[+] EMBL AU078393 [ GCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTNGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCANCATACGATGGTGCAAAGCCCTCACGGAGCCAATCGGAGTCGTCGCTTTGCAAGCAAACAGATTAACCC ]
[+] EMBL AU176420 [ CGCTGAAGCAGCCTGGACCAAGGGATGCTCCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATAC ]
[+] EMBL AU182702 [ CCGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCTTAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACGGGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATTCGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGNTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTNATACA ]
[-] EMBL CB658349 [ TCATCATCTATGATAGCCAGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA ]
[-] EMBL CB670784 [ GCCCTCACGGAGCCAATC GAGTCGTCGCTTTGCAAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCAGA TGTA CCCCGTGCATAATGAATGTACCATTCTC ]
[-] EMBL CB655778 [ AAGCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTTTAAGAAACAAGGCACCCCGATGGCATGAGCATTTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTTGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTTGCCATTTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CCCCGTGCATATGGATGGGATTT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CCCC GTGTCCCTAACTCT CGACTCT CTTTTCTCT TT TTCT TTCGTCT AAAGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAAC ]
[-] EMBL CB649376 [ GCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGTGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTGGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATGCATGGTATAACTCTTTGTTGTAAATGGCC CTCCTTTTCACTTGTTGA GGTA CCCCGTGCATAATGAATGTACCATTCTCCAAAAAAAggg ]
[-] EMBL CB652663 [ GCAAACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTATCTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAC CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGC CAGGGGCACTCTGCAATGAACA CACC GTGTCCTTAACTCT AGACTCT CTCTTCTCT TT TTCT CTGGTGT AATGATGT GGATGGAGTTGGTTTATGTTGCTCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCCCTTG TAAGGGTA CCCCGTGCATAATGAATGT ]
[-] EMBL CB649204 [ AGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CCCCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT TTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTCTCCAAAAAAAAAAAAAAAgg ]
[-] EMBL CB679136 [ GATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTATCT TT TTCT ATCGTCT AATGATGT GGATGGACTTGGTTTATGAAGATCTTGGAGAGATG AAGGCATAACTCTTTG ]
[+] EMBL AU101445 [ ccnAGTGCCCCGTAGGCNCAGAGCCACCGCATCAGATCCATTNA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTCTCCAAAAAAAAAAAAAAAAA ]
[+] EMBL CF196625 [ GTGCCCCGTAGGC CAGAG CACCGCATCAGATCCATTGA AGAAGCTGATTAGCACCT CAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTNGNTNGNG C ]
[-] EMBL CB964631 [ TGCCCCGTAGGC CAGAG CACCGCATCAGATCCCTTGAAGGAGAAGCTGATTAACCCCTCCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGT CGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCCTGGGGCATTGCAGATGAGGAGACCGTGATCCTCCAGTTCGGTAAGATTGAGGACGAGGCCTTCACGATGGACTACCGGCAGCCGCTGTCAGC CTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCCCGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACCCCCGTGCATATGGATGGGATCTCCCGTTGATAGCGCCGGATAGCCCTGAAGCCCCTGAACTATAGGGCCCCCTGTTGAAACC AGGAGAGTAAGGTGTAAAAGGGCGACCCGGGGCCCCCTGCACTGAACACCCCC GTGTCCCTAACTCT CGA CT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATGTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCACCTCCTTTTCACTTGCTGA TGTACCCCCGTGCATAATGAATGTAC ]
[+] EMBL BI796674 [ tCAGATGAGGAGACAGTGATCCTCCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACC GCAGCCGCTGTCAGCACTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTA CACCGTGCATATGGATGGGATCT CCGTTGATAGCG CGGATAG CCTGAAG CCCTGAACTATAGCG CCCCTGTTG AACCAAGGAGAGTAAGGAGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACCGGTGTCCCTAACTCTGCGACTCTGCTCTTCTCTGTTGTTCTGCTCGTCTGAATGATGTGGGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTCTCCAAAAAAAAAA ]
[+] EMBL AU078394 [ CCTGAAG CCCTGAACTNTAGCG CCCCTNTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCANTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTNTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA754444 [ CCCTGTTG AACC AGGAGAGTAAGGTGTAAAAGGGCGA CAGGGGCACACTGCACTGAACA CACC GTGTCCCTAACTCT CGACTCT CTCTTCTCT TT TTCT CTCGTCT AATGATGT GGATGGACTTGGTTTATGTTGATCTTGGAGAGATG ATGGTATAACTCTTTGTTGTAAATGGCA CTCCTTTTCACTTGCTGA TGTA CCCCGTGCATAATGAATGTACCATTCTCCANAAAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_16391#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 735 fasta sequence
[CAGGCGGTAATTATGAAGTTGAACAAGGGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCAGGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACCCCGTGCATATGGATGGGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTGTTGAACCAGGAGAGTAAGGTGTAAAAGGGGGACAGGGGCACANTGTACCCATCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGAGACACCTTGGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCG]
[-] EMBL CB649203 [CAGGCGGTAATTATGAAGTTGAACAAGGGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCAGGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACCCCGTGCATATGGATGGGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTGTTGAACCAGGAGAGTAAGGTGTAAAAGGGGGACAGGGGCACANTGTACCCATCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGAGACACCTTGGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCG]
consensusID : consensus_16391#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 713 fasta sequence
[GAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATGGGATCTCCGTTCATCCCCCTCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGCTTCGAGACGAGAGATCGGGCGGAGGAGCACCAACGGGAGAAGA]
[-] EMBL CB670783 [GAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATGGGATCTCCGTTCATCCCCCTCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGCTTCGAGACGAGAGATCGGGCGGAGGAGCACCAACGGGAGAAGA]
[-] EMBL CB655777 [ CTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGCTT ]
consensusID : consensus_16391#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence
[TCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGGTGATTAGCACCTCAAGCCCCTTGGCTTTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGACGATGATTTACACNGGGCATCCTCCCCCTCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGGTTCG]
[-] EMBL CB679135 [TCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCATTGAAGAAGGTGATTAGCACCTCAAGCCCCTTGGCTTTAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGACGATGATTTACACNGGGCATCCTCCCCCTCCTCCTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGGTTCG]
consensusID : consensus_16391#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence
[TAGGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCGGGGTGACCGTCGCCTCGGGGAAGAACTTCCAGGTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTCCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTGGCCATCTCCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATGGGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTGTGTCCCCCTCCTCGTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGTTAAGGGAAGCT]
[-] EMBL CB649375 [TAGGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATGGCGGGGTGACCGTCGCCTCGGGGAAGAACTTCCAGGTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTCCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTGGCCATCTCCCTCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATGGGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTGTGTCCCCCTCCTCGTCCTCTCCCTCCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGACTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCATGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGTTAAGGGAAGCT]
consensusID : consensus_16391#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 191 fasta sequence
[TGCACTGAACACACGGTKTACCTAACTCTCGACTCTCTCTTCTMTTTWAATCTCGTCTAATGATGTGGATGGACTTGGTTTATGTTGATCTTGGAGAGATGATGGTATAACTCHHTGTTGTAAATGGCACTCCTTTTCACTTGCTGATGTACCCCGTGCATAATGAATGTACCAGSGGSCGSAAATTCCTG]
[+] EMBL OS39602 [TGCACTGAACACACGGTKTACCTAACTCTCGACTCTCTCTTCTMTTTWAATCTCGTCTAATGATGTGGATGGACTTGGTTTATGTTGATCTTGGAGAGATGATGGTATAACTCHHTGTTGTAAATGGCACTCCTTTTCACTTGCTGATGTACCCCGTGCATAATGAATGTACCAGSGGSCGSAAATTCCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 AGACGAGCGGAGGCGCACGAGAGCACGATGAGGATTTGATTTTCTTTTTCTTTCTTTTGG 60
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 TTTCAAGTCTCATCGCCAAATTTCGTTTTCGATTTTTTTTATTTTTTTTGCTCGTCTCGT 120
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 CTCGTGTCTACCCTTTATTCATCCCTCTTCTCGCGTTGGTGCTCCTCCGCCCGATCTCTC 180
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GTCTCGAAGCTTCTGGAAGCTTCGGGGGGAGGGATCCCGGGCCGGGCTCGCCCGCCATGG 240
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 CGCTGTGGCGGTGTAGCTCCTCGTGGCTCTCGTCGGTGTCGCGCTCGTCGGGGGGAGTCG 300
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GCGGCGGCGAATCGAAGGTGTCGCCGGAGATCGCGCCGGTGAGCGGCGGGGAGGGGGAGG 360
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GAGAGGAGGAGGAGGGGGAGGAGGAGAGGTGGTCGCGGCTGCTGCCGGAGCTGCTCACGG 420
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 AGATCATGCGGCGCGTGGACGCCGGCGCCGAGCGGTGGCCGCCGCGGCGGGACGTGGTGG 480
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 CCTGCGCCTGCGTCTGCCGCCGGTGGAGGGACGCCGCGGTGTCCGTCGTGCGGCCGCCGC 540
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 TGGAGTGCGGGCGGATCACGTTCCCTTCCTCGCTGAAGCAGCCTGGACCAAGGGATGCTC 600
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 CGATGCACTGCTTCATCAGGAGGAACAAAAAGAACTCGACCTTCTACCTTTATCTCAGCT 660
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 TAACACAGGCCCTAACGGATAAAGGAAAGTTTCTGCTGGCTGCTCGAAGGTTCAGAAACG 720
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GGGCACATACAGAATATATCATTTCCTATGATTGTGATGATCTATTTCCAGGAAGCAATT 780
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 CGTATGTTGGGAAACTGAGATCTGACTTCCTGGGTACAAAGTTCATCATCTATGATAGCC 840
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 AGCCACCATACGATGGTGCAAAGCCCTCACGGAGCCAATCGAGTCGTCGCTTTGCAAGCA 900
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 AACAGATTAACCCAAATGTTTCAGGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGT 960
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 TCAACTTCCTCAAATCAAGAGGACCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAG 1020
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GCCAGAGCACCGCATCAGATCCATTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTC 1080
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 TAAGAAACAAGGCACCACGATGGCATGAGCATCTGCAGTGCTGGTGCTTGAATTTCCATG 1140
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 GCCGGGTGACCGTCGCCTCGGTGAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCG 1200
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ------------------------------------------------------------
consensus_16391#0 ATCCATGGGGCATTGCAGATGAGGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACG 1260
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------------------------------
consensus_16391#3 ---------------------------------------------------------TCA 3
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 ----------------------------------------------------------CA 2
consensus_16391#0 ACGCGTTCACGATGGACTACCGGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCC 1320
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------GAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGA 48
consensus_16391#3 GGCGGTAATTATGAAGTTGGACAAGTGTCATACAAGTTCAACTTCCTCAAATCAAGAGGA 63
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 GGCGGTAATTATGAAGTTGAACAAGGGTCATACAAGTTCAACTTCCTCAAATCAAGAGGA 62
consensus_16391#0 TCACAAGCTTTGGCACGAAGCTGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGA 1380
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 CCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCA 108
consensus_16391#3 CCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCA 123
consensus_16391#4 ------------------------------------------------------------
consensus_16391#1 CCAAGAAGAATGCAGTGCAATATCCAGTGCCCCGTAGGCCAGAGCACCGCATCAGATCCA 122
consensus_16391#0 TTTACACCGTGCATATGGATGGGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAA 1440
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 TTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGG 168
consensus_16391#3 TTGAAGAAGGTGATTAGCACCTCAAGCCCCTTGGCTTTAAGAAACAAGGCACCACGATGG 183
consensus_16391#4 -------------------------------------TAGGAAACAAGGCACCACGATGG 23
consensus_16391#1 TTGAAGAAGCTGATTAGCACCTCAAGCCCCTTGGCTCTAAGAAACAAGGCACCACGATGG 182
consensus_16391#0 CTATAGCGCCCCTGTTGAACCAGGAGAGTAAGGTGTAAAAGGGCGACAGGGGCACACTGC 1500
consensus_16391#5 ---------------------------------------------------------TGC 3
**
consensus_16391#2 CATGAGCATCTGCAGTGC-TGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGT 227
consensus_16391#3 CATGAGCATCTGCAGTGC-TGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGT 242
consensus_16391#4 CATGAGCATCTGCAGTGC-TGGTGCTTGAATTTCCATGGCGGGGTGACCGTCGCCTCGGG 82
consensus_16391#1 CATGAGCATCTGCAGTGC-TGGTGCTTGAATTTCCATGGCCGGGTGACCGTCGCCTCGGT 241
consensus_16391#0 ACTGAACACACCGTGTCCCTAACTCTCGACTCTCTCTTCTCTTTTTCTC-TCGTCT-AAT 1558
consensus_16391#5 ACTGAACACACGGTKTACCTAACTCTCGACTCTCTCTTCTMTTTWAATC-TCGTCT-AAT 61
*** ** * * * ** ** * ** * * *** **
consensus_16391#2 GAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGA 287
consensus_16391#3 GAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGA 302
consensus_16391#4 GAAGAACTTCCAGGTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGA 142
consensus_16391#1 GAAGAACTTCCAGCTCGTTGCTCCAGCTGGCACCAGCGATCCATGGGGCATTGCAGATGA 301
consensus_16391#0 GATGTGGATGGACTTGGTTTAT---GTTGATCTTGGAGAGATG-ATGGTATAACTCTTT- 1613
consensus_16391#5 GATGTGGATGGACTTGGTTTAT---GTTGATCTTGGAGAGATG-ATGGTATAACTCHHT- 116
** * * * * *** * * ** * ** ** ** *
consensus_16391#2 GGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGAC-TACC 346
consensus_16391#3 GGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGAC-TACC 361
consensus_16391#4 GGAGACAGTGATCCTCCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGAC-TACC 201
consensus_16391#1 GGAGACAGTGATCCTGCAGTTCGGTAAGATTGAGGACGACGCGTTCACGATGGAC-TACC 360
consensus_16391#0 GTTGTAAATGGCACTCCTTTTCACTTG--CTGATG-TACCCCGTGCATAATGAATGTACC 1670
consensus_16391#5 GTTGTAAATGGCACTCCTTTTCACTTG--CTGATG-TACCCCGTGCATAATGAATGTACC 173
* * * ** ** * *** * *** * * *** ** *** * ****
consensus_16391#2 GGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGC 406
consensus_16391#3 GGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCACGAAGC 421
consensus_16391#4 GGCAGCCGCTGTCAGCCTTCCAGGCGTTGGCCATCTCCCTCACAAGCTTTGGCACGAAGC 261
consensus_16391#1 GGCAGCCGCTGTCAGCCTTCCAGGCGTTCGCCATCTGCCTCACAAGCTTTGGCAGGAAGC 420
consensus_16391#0 ATTCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------- 1711
consensus_16391#5 AGSGGSCGSAAATTCCTG------------------------------------------ 191
*
consensus_16391#2 TGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATG 466
consensus_16391#3 TGGCCTGTGAATAAGTGTAACTTTTGGGTTTGACGATGATTTACACNGGGCAT------- 474
consensus_16391#4 TGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACACCGTGCATATGGATG 321
consensus_16391#1 TGGCCTGTGAATAAGTGTAACTTTTGGGTTTGATGATGATTTACCCCGTGCATATGGATG 480
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 GGATCTCCGTT------------------------------------------------- 477
consensus_16391#3 ------------------------------------------------------------
consensus_16391#4 GGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTG------- 374
consensus_16391#1 GGATCTCCGTTGATAGCGCGGATAGCCTGAAGCCCTGAACTATAGCGCCCCTGTTGAACC 540
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 ------------------------------------CATCCCCCTCCTCCTCCTCTCCCT 501
consensus_16391#3 ------------------------------------CCTCCCCCTCCTCCTCCTCTCCCT 498
consensus_16391#4 ------------------------------------TGTCCCCCTCCTCGTCCTCTCCCT 398
consensus_16391#1 AGGAGAGTAAGGTGTAAAAGGGGGACAGGGGCACANTGTACCCATCCTCCTCCTCTCCCT 600
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 CCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGA 561
consensus_16391#3 CCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGA 558
consensus_16391#4 CCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGCGACACCTTCGATTCGCCGCCGCCGA 458
consensus_16391#1 CCCCCTCCCCGCCGCTCACCGGCGCGATCTCCGGAGACACCTTGGATTCGCCGCCGCCGA 660
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 CTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCA 621
consensus_16391#3 CTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCA 618
consensus_16391#4 CTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCA 518
consensus_16391#1 CTCCCCCCGACGAGCGCGACACCGACGAGAGCCACGAGGAGCTACACCGCCACAGCGCCA 720
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 TGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGCTTCGAGACGAG 681
consensus_16391#3 TGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGCTTCCAGAAGGTTCG------- 671
consensus_16391#4 TGGCGGGCGAGCCCGGCCCGGGATCCCTCCCCCCGAAGTTAAGGGAAGCT---------- 568
consensus_16391#1 TGGCGGGCGAGCCCG--------------------------------------------- 735
consensus_16391#0 ------------------------------------------------------------
consensus_16391#5 ------------------------------------------------------------
consensus_16391#2 AGATCGGGCGGAGGAGCACCAACGGGAGAAGA 713
consensus_16391#3 --------------------------------
consensus_16391#4 --------------------------------
consensus_16391#1 --------------------------------
consensus_16391#0 --------------------------------
consensus_16391#5 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||