cluster # 1827

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Oryza sativa
cluster # 1827 cluster # 1827 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1827#0 length = 548 sequences # 2

consensusID : consensus_1827#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 548
fasta sequence

                              [TTTCTCGAGGGGATGATGTCCAGAAGTCGCTTGATGCCCGTGGTAAAATCCGCTGGGAAGGAGGCTTTCCACGTGGGGATTGGCGGCCCGGGGTGTACTCTGGACTGACGTACCGGCCTGAGAGAGGCCCACGAGGGTGCCCATGACTGGAAGAACAGTGCGGTCGCCCGGCGCGATCGCTGGCGTGCCGGTGGCGCTGACGGGGGACACCGGGAACGCCGACCACATGGTCCATTTCGCCATCACCGGCGCCGCGCTTTCCAGTGCGGCGAGCCTGCTCTCCGGCATATACTGATCGAGCCTGAAGTGCGGGAGGGGTTTAGGATTATGGATTTGTAGGAAATGTTCTCATCAGATGCACCCATGATGTGTAGTCCCCGTCGCCGCGTTCCTTTTATTTGTCTTCCTTCGAAACAATCCCAATGTTAGTGTAAGCTAGCTAGCTAGAGCTAGAACAA-C-AAAACTCCAGATGTAAGGCTAGCTACTTAGTTTATGTTTATGTTTCAT-GCAC-AC-AAGTACTTTTGGAGTTCGAATCCAAATCAAAAAAA]

[+] EMBL BI804632             [TTTCTCGAGGGGATGATGTCCAGAAGTCGCTTGATGCCCGTGGTAAAATCCGCTGGGAAGGAGGCTTTCCACGTGGGGATTGGCGGCCCGGGGTGTACTCTGGACTGACGTACCGGCCTGAGAGAGGCCCACGAGGGTGCCCATGACTGGAAGAACAGTGCGGTCGCCCGGCGCGATCGCTGGCGTGCCGGTGGCGCTGACGGGGGACACCGGGAACGCCGACCACATGGTCCATTTCGCCATCACCGGCGCCGCGCTTTCCAGTGCGGCGAGCCTGCTCTCCGGCATATACTGATCGAGCCTGAAGTGCGGGAGGGGTTTAGGATTATGGATTTGTAGGAAATGTTCTCATCAGATGCACCCATGATGTGTAGTCCCCGTCGCCGCGTTCCTTTTATTTGTCTTCCTTCGAAACAATCCCAATGTTAGTGTAAGCTAGCTAGCTAGAGCTAGAACAA C AAAACTCCAGATGTAAGGCTAGCTACTTAGTTTATGTTTATGTTTCAT GCAC AC AAGTACTTTTGGAGTTCGAATCCAAA         ]
[+] EMBL BI799944             [                                                                                                                                                                                                                                                                CTTTCCAGTGCGGCGAGCCTGCTCTCCGGCATATACTGATCGAGCCTGAAGTGCGGGAGGGGTTTAGGATTATGGATTTGTAGGAAATGTTCTCATCAGATGCACCCATGATGTGTAGTCCCCGTCGCCGCGTTCCTTTTATTTGTCTTCCTTCGAAACAATCCCAATGTTAGTGTAAGCTAGCTAGCTAGAGCTAGAACAAGCAAAAACTCCAGATGTAAGGCTAGCTACTTAGTTTATGTTTATGTTTCATGGCACAACAAAGTACTTTTGGAGTTCGAATCCTCCTCAAAAAAA]




>consensus_1827#0
TTTCTCGAGGGGATGATGTCCAGAAGTCGCTTGATGCCCGTGGTAAAATCCGCTGGGAAG
GAGGCTTTCCACGTGGGGATTGGCGGCCCGGGGTGTACTCTGGACTGACGTACCGGCCTG
AGAGAGGCCCACGAGGGTGCCCATGACTGGAAGAACAGTGCGGTCGCCCGGCGCGATCGC
TGGCGTGCCGGTGGCGCTGACGGGGGACACCGGGAACGCCGACCACATGGTCCATTTCGC
CATCACCGGCGCCGCGCTTTCCAGTGCGGCGAGCCTGCTCTCCGGCATATACTGATCGAG
CCTGAAGTGCGGGAGGGGTTTAGGATTATGGATTTGTAGGAAATGTTCTCATCAGATGCA
CCCATGATGTGTAGTCCCCGTCGCCGCGTTCCTTTTATTTGTCTTCCTTCGAAACAATCC
CAATGTTAGTGTAAGCTAGCTAGCTAGAGCTAGAACAACAAAACTCCAGATGTAAGGCTA
GCTACTTAGTTTATGTTTATGTTTCATGCACACAAGTACTTTTGGAGTTCGAATCCAAAT
CAAAAAAA

clustalw multiple alignements is not computed in this case