cluster # 1872

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Oryza sativa
cluster # 1872 cluster # 1872 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1872#0 length = 1563 sequences # 2
consensusID : consensus_1872#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1563
fasta sequence
                              [CGCAAGCTCACGCAGCTCCAGCACTGGCCTCGTGTTCGATCGATGGACATGGCGGCCTGCGTCGACGACGTCGGCAAGCCGCGGGCGTCGAGGAAGGTGTGCGTGATCGCCGCCGCCGCCGCCGCGAAGCCGGTGAGGGTGCACAGCAGCATGTACGCCTCGCTCCGGCTGCTCGGCCCCCGCGAGGTCATGGGATTCTCCGACTTCCAGTTCGTGCCGGCCAGGAAGAGCCGCTGCGGCGGCGGCGACAACCCCGGCGGCCGCGACCCGCGCCGCTTCCCGGGGCACCGCGAGGTGTACCTCTACCTCAGGGACTTTTACCGCGCGGCGGGGCTCACCGACTCCGTCAGGTTTAACACCAGGGTGGTGCGCGTCGCCGTGGCGCCGCCGCCATGCCGAGGTGGCCCCGGCGACGCGCTGAGATGGGTGGTGAGATCCATGGACGCCGGCCTCTGGAAGCGATGCACCGATGACCAGATGGCGGAGGCGCACTGCGTCGAGGAGGTGTTCGACGCCGTCGTCGTGGCCACCGGCCACTACTCGCAACCAAAGCTGCCTAGCATCCAAGGAATGGGGGATTGGAAACGGAGGCAGATGCACAGCCACTGGTACCGGGTCCCGGACTCCTTCCGCGACGAGGTGGTGGTGCTGGTGGGCTGCGGCGACAGCGGCATGGACATCGCGCTGGACCTCCTCGCCGTCGCGAGGGAGGTGCACCTCTCCGCCAAGTCTGTGGAGGCGGCCGCGACGCCGGCGATGTCCAAGATGCTGGCGAGGCACGCCAACCTCCACCTGCACCCGCAGATCGAGCGCCTGTGCGACGACGGCCGCGTGGTGTTCGCCGACGGCGGCGGGGGCGTCGTCGCCGCCGACACCGTCATGTACTGCACCGGGTACCGCTACTCGTTCCCGTTCCTGGACACCGAGGGGAAGGTCGCCGTCGACGACGACGACAACCGCATCGGGCCTCTGTTCGAGCACACGTTCCCGCCGTCGCTCGCGCCGTCGCTGTCGTTCGTCGGCATCCCGAGGAAGGTGATGGTGCCGTGGTTCTTCGAGGCGCAGGGGAGGTGGATCGCCGGCGTGCTG-TCCGGCCGGCGGGCGCTGCCGTCCGAGGAGGAGATGACGCGGT-CCGTGGAGGAGTTCTACCGCGCCAGGGAGCTCGCCGGCGTGCCCAAGGCGCACACCCACGACGTCGAGCCTCACAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGGAAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGCGACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCTGAGCACCAGGCTCAAGACGAAGAAGA-CCCAGCTGCCGCTGCTGCACAAGCACCCGTGCACAGCTCGCTCTGAAGCCTGTACAGCTGTGTGTTCTGTGCTCTGCACAATCATAATTTTCTTCTACAGAGCATGAAAATTTCTGAAATAAAACAGAGCATGCAGAAATTTCGAAAAAAAAAAAAA]

[+] EMBL AK109647             [CGCAAGCTCACGCAGCTCCAGCACTGGCCTCGTGTTCGATCGATGGACATGGCGGCCTGCGTCGACGACGTCGGCAAGCCGCGGGCGTCGAGGAAGGTGTGCGTGATCGCCGCCGCCGCCGCCGCGAAGCCGGTGAGGGTGCACAGCAGCATGTACGCCTCGCTCCGGCTGCTCGGCCCCCGCGAGGTCATGGGATTCTCCGACTTCCAGTTCGTGCCGGCCAGGAAGAGCCGCTGCGGCGGCGGCGACAACCCCGGCGGCCGCGACCCGCGCCGCTTCCCGGGGCACCGCGAGGTGTACCTCTACCTCAGGGACTTTTACCGCGCGGCGGGGCTCACCGACTCCGTCAGGTTTAACACCAGGGTGGTGCGCGTCGCCGTGGCGCCGCCGCCATGCCGAGGTGGCCCCGGCGACGCGCTGAGATGGGTGGTGAGATCCATGGACGCCGGCCTCTGGAAGCGATGCACCGATGACCAGATGGCGGAGGCGCACTGCGTCGAGGAGGTGTTCGACGCCGTCGTCGTGGCCACCGGCCACTACTCGCAACCAAAGCTGCCTAGCATCCAAGGAATGGGGGATTGGAAACGGAGGCAGATGCACAGCCACTGGTACCGGGTCCCGGACTCCTTCCGCGACGAGGTGGTGGTGCTGGTGGGCTGCGGCGACAGCGGCATGGACATCGCGCTGGACCTCCTCGCCGTCGCGAGGGAGGTGCACCTCTCCGCCAAGTCTGTGGAGGCGGCCGCGACGCCGGCGATGTCCAAGATGCTGGCGAGGCACGCCAACCTCCACCTGCACCCGCAGATCGAGCGCCTGTGCGACGACGGCCGCGTGGTGTTCGCCGACGGCGGCGGGGGCGTCGTCGCCGCCGACACCGTCATGTACTGCACCGGGTACCGCTACTCGTTCCCGTTCCTGGACACCGAGGGGAAGGTCGCCGTCGACGACGACGACAACCGCATCGGGCCTCTGTTCGAGCACACGTTCCCGCCGTCGCTCGCGCCGTCGCTGTCGTTCGTCGGCATCCCGAGGAAGGTGATGGTGCCGTGGTTCTTCGAGGCGCAGGGGAGGTGGATCGCCGGCGTGCTG TCCGGCCGGCGGGCGCTGCCGTCCGAGGAGGAGATGACGCGGT CCGTGGAGGAGTTCTACCGCGCCAGGGAGCTCGCCGGCGTGCCCAAGGCGCACACCCACGACGTCGAGCCTCACAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGGAAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGCGACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCTGAGCACCAGGCTCAAGACGAAGAAGA CCCAGCTGCCGCTGCTGCACAAGCACCCGTGCACAGCTCGCTCTGAAGCCTGTACAGCTGTGTGTTCTGTGCTCTGCACAATCATAATTTTCTTCTACAGAGCATGAAAATTTCTGAAATAAAACAGAGCATGC                       ]
[+] EMBL C99185               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTGCTGTTCCGTCCGGCGGNCGCTGCCGTCCGAGGAGGAGATGACTCGGTCCCGTGGAGGAGTTCTACCGCGCCAGGGAGCTCGCCGGCNTGCCNAAGGCGCACACCCACGACGTCGAGCCTCACAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGGAAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGCGACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCTGAGCACCAGGCTCAAGACGAAGAAGACCCCAGCTGCCGCTGCTGCACAAGCACCCGTGCACAGCTCGCTCTGAAGCCTGTACAGCTGTGTGTTCTGTGCTCTGCACAATCATAATTTTCTTCTACAGAGCATGAAAATTTCTGAAATAAAACAGAGCATGCAGAAATTTCGAAAAAAAAAAAAA]




>consensus_1872#0
CGCAAGCTCACGCAGCTCCAGCACTGGCCTCGTGTTCGATCGATGGACATGGCGGCCTGC
GTCGACGACGTCGGCAAGCCGCGGGCGTCGAGGAAGGTGTGCGTGATCGCCGCCGCCGCC
GCCGCGAAGCCGGTGAGGGTGCACAGCAGCATGTACGCCTCGCTCCGGCTGCTCGGCCCC
CGCGAGGTCATGGGATTCTCCGACTTCCAGTTCGTGCCGGCCAGGAAGAGCCGCTGCGGC
GGCGGCGACAACCCCGGCGGCCGCGACCCGCGCCGCTTCCCGGGGCACCGCGAGGTGTAC
CTCTACCTCAGGGACTTTTACCGCGCGGCGGGGCTCACCGACTCCGTCAGGTTTAACACC
AGGGTGGTGCGCGTCGCCGTGGCGCCGCCGCCATGCCGAGGTGGCCCCGGCGACGCGCTG
AGATGGGTGGTGAGATCCATGGACGCCGGCCTCTGGAAGCGATGCACCGATGACCAGATG
GCGGAGGCGCACTGCGTCGAGGAGGTGTTCGACGCCGTCGTCGTGGCCACCGGCCACTAC
TCGCAACCAAAGCTGCCTAGCATCCAAGGAATGGGGGATTGGAAACGGAGGCAGATGCAC
AGCCACTGGTACCGGGTCCCGGACTCCTTCCGCGACGAGGTGGTGGTGCTGGTGGGCTGC
GGCGACAGCGGCATGGACATCGCGCTGGACCTCCTCGCCGTCGCGAGGGAGGTGCACCTC
TCCGCCAAGTCTGTGGAGGCGGCCGCGACGCCGGCGATGTCCAAGATGCTGGCGAGGCAC
GCCAACCTCCACCTGCACCCGCAGATCGAGCGCCTGTGCGACGACGGCCGCGTGGTGTTC
GCCGACGGCGGCGGGGGCGTCGTCGCCGCCGACACCGTCATGTACTGCACCGGGTACCGC
TACTCGTTCCCGTTCCTGGACACCGAGGGGAAGGTCGCCGTCGACGACGACGACAACCGC
ATCGGGCCTCTGTTCGAGCACACGTTCCCGCCGTCGCTCGCGCCGTCGCTGTCGTTCGTC
GGCATCCCGAGGAAGGTGATGGTGCCGTGGTTCTTCGAGGCGCAGGGGAGGTGGATCGCC
GGCGTGCTGTCCGGCCGGCGGGCGCTGCCGTCCGAGGAGGAGATGACGCGGTCCGTGGAG
GAGTTCTACCGCGCCAGGGAGCTCGCCGGCGTGCCCAAGGCGCACACCCACGACGTCGAG
CCTCACAAAATGTATGAGCTTGGGGAGAAGTACTGCGATTTCCCGCGCACGGAGGAGTGG
AAGAGGGAGCTGATGGCGATCATCAGCCGGAACACGAGCGACGACATGGAGACGTTCCGC
GACCGCGACGACGACAGCGACAACGTCCGCAGGTGCCTGCAGGAGTGGTACGCCCTGGCT
GAGCACCAGGCTCAAGACGAAGAAGACCCAGCTGCCGCTGCTGCACAAGCACCCGTGCAC
AGCTCGCTCTGAAGCCTGTACAGCTGTGTGTTCTGTGCTCTGCACAATCATAATTTTCTT
CTACAGAGCATGAAAATTTCTGAAATAAAACAGAGCATGCAGAAATTTCGAAAAAAAAAA
AAA
clustalw multiple alignements is not computed in this case