cluster # 1883

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Oryza sativa
cluster # 1883 cluster # 1883 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1883#0 length = 585 sequences # 2

consensusID : consensus_1883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 585
fasta sequence

                              [CCAAGNCTCGCTCGCTCATCGGCGAGCTCCAAATNCACCTGTGTAGCTCAACAGGACGCACACGCAGAGCAGCTAGCTACCAAAGCATAACAAGCTCTGCAGCCTCAAGAGTGAACATGATGCGNTGTAGCGACCGGCTCCTCTGCAGCCTCTTCCTCGCCGCCGCGTTGTTCGGCGTCGCAG-CGCGGCGACG-GGCACTACAGACTGGGACATCAGCTACCAGTTCACGTCGCCCGANTGCGTACG-AAGNTGGCCGTCACCATCAACGGCCACANGNCGGGCCCCACCATCCGCGCCGTCCAGGGGGACACCATCGTCGTCAACGTCAAGAACTCGCTGCTGACGGAGAACGTCGCCATCCACTGGCACGGCATCCGGCAGATCGGCACGCCGTGGGCGGACGGCACGGAGGGCGTCACCCAGTGCCCCATCCTCCCCGGCGACACCTTCGCCTACACCTTCGTCGTCGACCGCCCGGGCACCTACATGTACCACGCCCACTACGGGATGCAGCGCTCGGCGGGCCTCAACGGCATGATCGTCGTCGAGGTCGCCCCCGGCGCCGCCGGCGACGGCGAGCGGGAG]

[+] EMBL OSC101271            [CCAAGNCTCGCTCGCTCATCGGCGAGCTCCAAATNCACCTGTGTAGCTCAACAGGACGCACACGCAGAGCAGCTAGCTACCAAAGCATAACAAGCTCTGCAGCCTCAAGAGTGAACATGATGCGNTGTAGCGACCGGCTCCTCTGCAGCCTCTTCCTCGCCGCCGCGTTGTTCGGCGTCGCAG CGCGGCGACG GGCACTACAGACTGGGACATCAGCTACCAGTTCACGTCGCCCGANTGCGTACG AAGNTGGCCGTCACCATCAACGGCCACANGNCGGGCCCC                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA756250             [  AAG CTCGCTCGCTCATCGGCGAGCTCCAAATCCACCTGTGTAGCTCAACAGGACGCACACGCAGAGCAGCTAGCTACCAAAGCATAACAAGCTCTGCAGCCTCAAGAGTGAACATGATGCGGTGTAGCGACCGCCTCCTCTGCAGCCTCTTCCTCGCCGCCGCGCTGTTCGGCGTCGCCGCCGCGGCGACGCGGCGCCAC GACTGGGACATCAGCTACCAGTTCACGTCGCCCGACTGCGTACGCAAGCTGGCCGTCACCATCAACGGCCACACGCCGGGCCCCACCATCCGCGCCGTCCAGGGGGACACCATCGTCGTCAACGTCAAGAACTCGCTGCTGACGGAGAACGTCGCCATCCACTGGCACGGCATCCGGCAGATCGGCACGCCGTGGGCGGACGGCACGGAGGGCGTCACCCAGTGCCCCATCCTCCCCGGCGACACCTTCGCCTACACCTTCGTCGTCGACCGCCCGGGCACCTACATGTACCACGCCCACTACGGGATGCAGCGCTCGGCGGGCCTCAACGGCATGATCGTCGTCGAGGTCGCCCCCGGCGCCGCCGGCGACGGCGAGCGGGAG]




>consensus_1883#0
CCAAGNCTCGCTCGCTCATCGGCGAGCTCCAAATNCACCTGTGTAGCTCAACAGGACGCA
CACGCAGAGCAGCTAGCTACCAAAGCATAACAAGCTCTGCAGCCTCAAGAGTGAACATGA
TGCGNTGTAGCGACCGGCTCCTCTGCAGCCTCTTCCTCGCCGCCGCGTTGTTCGGCGTCG
CAGCGCGGCGACGGGCACTACAGACTGGGACATCAGCTACCAGTTCACGTCGCCCGANTG
CGTACGAAGNTGGCCGTCACCATCAACGGCCACANGNCGGGCCCCACCATCCGCGCCGTC
CAGGGGGACACCATCGTCGTCAACGTCAAGAACTCGCTGCTGACGGAGAACGTCGCCATC
CACTGGCACGGCATCCGGCAGATCGGCACGCCGTGGGCGGACGGCACGGAGGGCGTCACC
CAGTGCCCCATCCTCCCCGGCGACACCTTCGCCTACACCTTCGTCGTCGACCGCCCGGGC
ACCTACATGTACCACGCCCACTACGGGATGCAGCGCTCGGCGGGCCTCAACGGCATGATC
GTCGTCGAGGTCGCCCCCGGCGCCGCCGGCGACGGCGAGCGGGAG

clustalw multiple alignements is not computed in this case